EWM24474.1, cds6200 (CDS) Nannochloropsis gaditana

Overview
NameEWM24474.1
Unique Namecds6200
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:865826..866698 -

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Properties
Property NameValue
Protein idEWM24474.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100239g5.3872.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:865826..866698 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24474.1 vs. NCBI_GenBank
Match: gi|553184808|ref|XP_005854149.1| (hypothetical protein NGA_0198600 [Nannochloropsis gaditana CCMP526] >gi|422294911|gb|EKU22211.1| hypothetical protein NGA_0198600 [Nannochloropsis gaditana CCMP526] >gi|585105944|gb|EWM24474.1| hypothetical protein Naga_100239g5 [Nannochloropsis gaditana])

HSP 1 Score: 573.163 bits (1476), Expect = 0.000e+0
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0 
Query:    1 MLKVAVLILSLASLGLSAADELVPTRDTTSSPSGSLRGSNSILNVTNESEVEPRRVPEEFSCVGSICTTLATVRLSQAGPEQKQEALEVRHRGDAERIPRTMKAGDVKSASTSLSPVPGIAALETSGRGGKALGAADGPTCKGVKCLMPAMPPMVAQPVAQPLAPSNGVVMEERNDTNANSTSSITTTTTAADGTTISSSLICTNSRCVLCSEGLCKVAEPDMQGNSTALSMTGPGTRVEITCKDSVCVTVTTERAANGTLSSTTTQATTKSVPFRGTTTKSGEGIGDSG 290
            MLKVAVLILSLASLGLSAADELVPTRDTTSSPSGSLRGSNSILNVTNESEVEPRRVPEEFSCVGSICTTLATVRLSQAGPEQKQEALEVRHRGDAERIPRTMKAGDVKSASTSLSPVPGIAALETSGRGGKALGAADGPTCKGVKCLMPAMPPMVAQPVAQPLAPSNGVVMEERNDTNANSTSSITTTTTAADGTTISSSLICTNSRCVLCSEGLCKVAEPDMQGNSTALSMTGPGTRVEITCKDSVCVTVTTERAANGTLSSTTTQATTKSVPFRGTTTKSGEGIGDSG
Sbjct:    1 MLKVAVLILSLASLGLSAADELVPTRDTTSSPSGSLRGSNSILNVTNESEVEPRRVPEEFSCVGSICTTLATVRLSQAGPEQKQEALEVRHRGDAERIPRTMKAGDVKSASTSLSPVPGIAALETSGRGGKALGAADGPTCKGVKCLMPAMPPMVAQPVAQPLAPSNGVVMEERNDTNANSTSSITTTTTAADGTTISSSLICTNSRCVLCSEGLCKVAEPDMQGNSTALSMTGPGTRVEITCKDSVCVTVTTERAANGTLSSTTTQATTKSVPFRGTTTKSGEGIGDSG 290
The following BLAST results are available for this feature:
BLAST of EWM24474.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553184808|ref|XP_005854149.1|0.000e+0100.00hypothetical protein NGA_0198600 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6215rna6215Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications