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Properties
| Property Name | Value |
|---|
| Product | Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich |
| Orig transcript id | gnl|cribi|Naga_100662g3.4388.mrna |
| Orig protein id | gnl|cribi|Naga_100662g3.4388 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:834082..835704 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6205 ID=rna6205|Name=rna6205|organism=Nannochloropsis gaditana|type=mRNA|length=1481bp
ATGGATCCCGGTGTTGCTGGACATTTGATTGGTCAAGGCGCCGCCTTGGG
TGTTATTCATGTCCTCTCTGGTCCGGACCACATCTCAGCGTTGGCCGCAT
TGACGGCAACTGTCCCGCCTTACAAAGCTTTCATGGCTGGTGTTCAGTGG
GGTCTGGGCCACAGCACAGGCCTTATCATTGTAACTGGCATCTTCGTCAG
TGTCGAACACGAGGTGATGGACAGAGTAGCAGGTTATTTCGAGTGGGTTG
TTGGCTTTCTGATGATACTTCTGGGAGTATGGACCATGTGGAGAGCCTTC
CATCCCCCCAAGGACTCCCTGGCCGCCTTAACACCGCGGGAGAAGGCGAG
TTTCTCTGTTTCCCCCGTCCAGCGGCTGTCTGGTGAAGAAGACTCGAAAA
AGACTTCGAAAAGTCTTCACAGGGAGGCTCCTGGAGGGTCAGGCATCAAC
GAGTCGAATTCCACGGGGAGGGGGGGGGAGGGAGAGGACGAGGATGCAGG
GGAGGCGGTGGTGGTGAACTTCGATGACAAGGGCACTCCGGAGGAAAGCC
CCGGTTCCACCGCCTCGGGCACAGAAGAGGAAAAGCAGGAGGAAAAAAGT
GGGAGGAAATGGTGGAGACCGACACAGATCAAGGAGAAAATCCTTTCCTT
CGTCGTCGGCATTGTGCACGGGGTGGCGGGTCCGGGGGGTATCCTCGGTG
TCCTCCCTGCCGTCCAACTCCGGGACTGGAGCAAATCCTCTTTGTACTTG
GCTACCTTTTGCATCATCTCTTCTGTGACAATGGGGGTGTTCGCGGCCAT
CTACGGCGGGATCACGCACGGGCTGGGCAAGCGCATGGGGGAACACGACA
AAAAGAGCGGAAAACAGCGGGCGGAAAAATTGGAGTTTGGCCTGAAGATA
TTCAGCGCCCTCCTCTCTTTTGTCGTGGGTGTACTCTGGATCGTCTTGTC
GGCGACGGGTAAGATGGGGGAGGTCTTTCCCGAGTAGAGGGAGGGAGAAA
AGGGGGGGGACATGGGCGGGAGGAGGGAGGGAAAGGAGCCGGTTGTCAGA
ACGCTTCCCCAGGAGGGCGATGGTACACGCCGAGAATCCGCAAGGAGTCC
TTTTTCGTCTTTAGGAAAGGCCTTGTTAAGGATAACATCCGTCGGCCAGG
GAGGGCAAAACAAGCTTGGCCGAGAAGGAGAGAGGGAGAAAGCAGAGACG
GTGAAGGAGCGGTTACCGAGGCGGCGGACCCGTCTCATCTGTGGTGGTGC
CACAGAGCAATGAATTGGGTCGCAAAGAATGGAACGGCTGGAGCTCAATC
CCGAGTGGGGGTGTCAAGAGAGCAGTCGTCAGGCAAAGGCACAATCGGTA
GCTTTCCATGATAGCACCTGATAGCACCCCAGGCCTTGCGTCTCTCAAAT
AAATCAAAGTACTGAAAATTAGCAAATTATCAGGCATGGGGAGGAAGTAA
AGATCACGAAAGTAAGTAAATAGAAAACGGA back to topprotein sequence of rna6205 >rna6205-protein ID=rna6205-protein|Name=rna6205|organism=Nannochloropsis gaditana|type=polypeptide|length=246bp
MTRKEKSISEKVRSHALFGGAITISLPASFSSASDIRQVPDNQEVFIDDA
SDASLILELLDLERDKEGLEAATYFFNDLAEHNDAQNATIQYKEDLSGTS
LVPNLAAYPTYALVGTQTVSKFHAADAALLPVRIYLVNVRLQQTGTDVLL
TLNLPALAQAPAAASFNAAMFVKGNVCPDSGMAALQEALASLTIRNWGLF
GGAIRIRESVQHEYTHITARQDGVGWAFSIRLLKVSNNALIKSREA back to topmRNA from alignment at CM002467.1:834082..835704- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6205 ID=rna6205|Name=rna6205|organism=Nannochloropsis gaditana|type=mRNA|length=1623bp|location=Sequence derived from alignment at CM002467.1:834082..835704- (Nannochloropsis gaditana)
ATGACCAGAAAGGAAAAAAGTATTTCGGAAAAAGGTATTTCAGTCTATTG
ACCGTGGGGGCCGGCGCATGGACGGTGCGTCTAGTTGTTTTACAGATAGT
TCCCAATCGACAGATGCAAAACGCCAGATTTTGCACGTAAACTAACCATC
TTTTCATGATGGTCATTCAGTCCGTTCGCACGCGCTTTTCGGTGGCGCCA
TCACGATTTCCCTTCCAGCTTCCTTCTCCAGTGCCAGGTCCGTGGAGTTT
TCAGTGTCGAATCTCATGTGCCTGCAGGGTTGTGGGAATCAAGAAGCATG
GATCAAATCCCCCCCCTGACGCTCTTTCCAACGCATGAATCTGCTCCCAG
TGACATACGACAAGTTCCCGACAACCAAGAAGTGTTCATCGACGATGCCT
CAGACGCCTCCCTCATCCTCGAGCTCTTGGATTTGGAGCGTGACAAGGAG
GGACTGGAGGTAGGCAATCACTTTCCCAATCGCACTCTTATTTTCTTATA
CCGCGAGCCATGCTGGCATAATAATATTACATTTTGCGTTGGGGGGGTTT
GCATATGGATCCGACGTGCGTGTCTGGCTGCGAGGGCCTTCAAGAGGGGA
AGGGGGGGGGGGGGCAGAGGGGTAATACATCACAGGCATACTTCCATGTC
TACCCGCGCGTCCATCCCGCTTTGACGTTATTCCTACAGGATCGAAGGCC
GAAGGGTGGCCGTACATAGTGGGATATCAGAATCACGCTGATCCCTTGAT
TGAGTCCTAGCGTCTTACACTACCTTACACCCCCCTCCCTCCCCCTCCCT
TGCCACCAGGCCGCTACCTATTTCTTCAACGACTTGGCCGAGCACAATGA
CGCCCAAAACGCCACTATCCAATACAAAGAAGACTTGAGCGGAACGAGCC
TGGTGCCTAATTTGGCAGCCTACCCCACATACGCCCTGGTAGGCACGCAA
ACTGTCTCCAAATTCCACGCAGCGGATGCAGCGTTGTTGCCTGTTCGGAT
ATACCTAGTCAATGTTCGTCTCCAACAGACGGGCACAGACGTACTTCTGA
CGCTAAACCTGCCCGCCCTGGCGCAAGCACCTGCTGCTGCTTCTTTCAAT
GCGGCGATGTTTGTCAAGGTACGTTCAGCCACGCTATGTCGAACAAAAAT
CGCGTCAATATTTGTGATGTAACGATTAATTGAAAAGGAGCATTGAAACA
CTTTCGCGTGCAAACAAGCTAGAATTCGGGATTGCTGTCAAGAATATTAG
GTGTCATATCATGCAGTTGTTATTACTTTCGTCACACTTATGACATCTCG
ATACACTATTCCACTCTCAACACATCAGGGAAACGTGTGCCCCGATTCAG
GGATGGCAGCTTTACAGGAAGCGCTAGCAAGCCTTACCATTAGGAACTGG
GGCTTATTCGGTTAAATACGTCATCAGTCAAGAAGATTTATGCTTGGATT
TTGGTACCCAATACCAACTTGCTCTTTCTTCAGGCGGTGCAATTAGAATT
AGAGAATCAGTACAGCATGAGTATACACACATCACAGCCAGACAAGACGG
AGTCGGGTGGGCATTCAGTATACGTCTCTTAAAAGTCTCAAACAATGCAT
TAATTAAGTCGAGAGAAGCGTAA back to topCoding sequence (CDS) from alignment at CM002467.1:834082..835704- >rna6205 ID=rna6205|Name=rna6205|organism=Nannochloropsis gaditana|type=CDS|length=4446bp|location=Sequence derived from alignment at CM002467.1:834082..835704- (Nannochloropsis gaditana)
GCGGTGCAATTAGAATTAGAGAATCAGTACAGCATGAGTATACACACATC
ACAGCCAGACAAGACGGAGTCGGGTGGGCATTCAGTATACGTCTCTTAAA
AGTCTCAAACAATGCATTAATTAAGTCGAGAGAAGCGTAAGGAAACGTGT
GCCCCGATTCAGGGATGGCAGCTTTACAGGAAGCGCTAGCAAGCCTTACC
ATTAGGAACTGGGGCTTATTCGGCCGCTACCTATTTCTTCAACGACTTGG
CCGAGCACAATGACGCCCAAAACGCCACTATCCAATACAAAGAAGACTTG
AGCGGAACGAGCCTGGTGCCTAATTTGGCAGCCTACCCCACATACGCCCT
GGTAGGCACGCAAACTGTCTCCAAATTCCACGCAGCGGATGCAGCGTTGT
TGCCTGTTCGGATATACCTAGTCAATGTTCGTCTCCAACAGACGGGCACA
GACGTACTTCTGACGCTAAACCTGCCCGCCCTGGCGCAAGCACCTGCTGC
TGCTTCTTTCAATGCGGCGATGTTTGTCAAGTGACATACGACAAGTTCCC
GACAACCAAGAAGTGTTCATCGACGATGCCTCAGACGCCTCCCTCATCCT
CGAGCTCTTGGATTTGGAGCGTGACAAGGAGGGACTGGAGTCCGTTCGCA
CGCGCTTTTCGGTGGCGCCATCACGATTTCCCTTCCAGCTTCCTTCTCCA
GTGCCAGATGACCAGAAAGGAAAAAAGTATTTCGGAAAAAGGCGGTGCAA
TTAGAATTAGAGAATCAGTACAGCATGAGTATACACACATCACAGCCAGA
CAAGACGGAGTCGGGTGGGCATTCAGTATACGTCTCTTAAAAGTCTCAAA
CAATGCATTAATTAAGTCGAGAGAAGCGTAAGGAAACGTGTGCCCCGATT
CAGGGATGGCAGCTTTACAGGAAGCGCTAGCAAGCCTTACCATTAGGAAC
TGGGGCTTATTCGGCCGCTACCTATTTCTTCAACGACTTGGCCGAGCACA
ATGACGCCCAAAACGCCACTATCCAATACAAAGAAGACTTGAGCGGAACG
AGCCTGGTGCCTAATTTGGCAGCCTACCCCACATACGCCCTGGTAGGCAC
GCAAACTGTCTCCAAATTCCACGCAGCGGATGCAGCGTTGTTGCCTGTTC
GGATATACCTAGTCAATGTTCGTCTCCAACAGACGGGCACAGACGTACTT
CTGACGCTAAACCTGCCCGCCCTGGCGCAAGCACCTGCTGCTGCTTCTTT
CAATGCGGCGATGTTTGTCAAGTGACATACGACAAGTTCCCGACAACCAA
GAAGTGTTCATCGACGATGCCTCAGACGCCTCCCTCATCCTCGAGCTCTT
GGATTTGGAGCGTGACAAGGAGGGACTGGAGTCCGTTCGCACGCGCTTTT
CGGTGGCGCCATCACGATTTCCCTTCCAGCTTCCTTCTCCAGTGCCAGAT
GACCAGAAAGGAAAAAAGTATTTCGGAAAAAGGCGGTGCAATTAGAATTA
GAGAATCAGTACAGCATGAGTATACACACATCACAGCCAGACAAGACGGA
GTCGGGTGGGCATTCAGTATACGTCTCTTAAAAGTCTCAAACAATGCATT
AATTAAGTCGAGAGAAGCGTAAGGAAACGTGTGCCCCGATTCAGGGATGG
CAGCTTTACAGGAAGCGCTAGCAAGCCTTACCATTAGGAACTGGGGCTTA
TTCGGCCGCTACCTATTTCTTCAACGACTTGGCCGAGCACAATGACGCCC
AAAACGCCACTATCCAATACAAAGAAGACTTGAGCGGAACGAGCCTGGTG
CCTAATTTGGCAGCCTACCCCACATACGCCCTGGTAGGCACGCAAACTGT
CTCCAAATTCCACGCAGCGGATGCAGCGTTGTTGCCTGTTCGGATATACC
TAGTCAATGTTCGTCTCCAACAGACGGGCACAGACGTACTTCTGACGCTA
AACCTGCCCGCCCTGGCGCAAGCACCTGCTGCTGCTTCTTTCAATGCGGC
GATGTTTGTCAAGTGACATACGACAAGTTCCCGACAACCAAGAAGTGTTC
ATCGACGATGCCTCAGACGCCTCCCTCATCCTCGAGCTCTTGGATTTGGA
GCGTGACAAGGAGGGACTGGAGTCCGTTCGCACGCGCTTTTCGGTGGCGC
CATCACGATTTCCCTTCCAGCTTCCTTCTCCAGTGCCAGATGACCAGAAA
GGAAAAAAGTATTTCGGAAAAAGGCGGTGCAATTAGAATTAGAGAATCAG
TACAGCATGAGTATACACACATCACAGCCAGACAAGACGGAGTCGGGTGG
GCATTCAGTATACGTCTCTTAAAAGTCTCAAACAATGCATTAATTAAGTC
GAGAGAAGCGTAAGGAAACGTGTGCCCCGATTCAGGGATGGCAGCTTTAC
AGGAAGCGCTAGCAAGCCTTACCATTAGGAACTGGGGCTTATTCGGCCGC
TACCTATTTCTTCAACGACTTGGCCGAGCACAATGACGCCCAAAACGCCA
CTATCCAATACAAAGAAGACTTGAGCGGAACGAGCCTGGTGCCTAATTTG
GCAGCCTACCCCACATACGCCCTGGTAGGCACGCAAACTGTCTCCAAATT
CCACGCAGCGGATGCAGCGTTGTTGCCTGTTCGGATATACCTAGTCAATG
TTCGTCTCCAACAGACGGGCACAGACGTACTTCTGACGCTAAACCTGCCC
GCCCTGGCGCAAGCACCTGCTGCTGCTTCTTTCAATGCGGCGATGTTTGT
CAAGTGACATACGACAAGTTCCCGACAACCAAGAAGTGTTCATCGACGAT
GCCTCAGACGCCTCCCTCATCCTCGAGCTCTTGGATTTGGAGCGTGACAA
GGAGGGACTGGAGTCCGTTCGCACGCGCTTTTCGGTGGCGCCATCACGAT
TTCCCTTCCAGCTTCCTTCTCCAGTGCCAGATGACCAGAAAGGAAAAAAG
TATTTCGGAAAAAGGCGGTGCAATTAGAATTAGAGAATCAGTACAGCATG
AGTATACACACATCACAGCCAGACAAGACGGAGTCGGGTGGGCATTCAGT
ATACGTCTCTTAAAAGTCTCAAACAATGCATTAATTAAGTCGAGAGAAGC
GTAAGGAAACGTGTGCCCCGATTCAGGGATGGCAGCTTTACAGGAAGCGC
TAGCAAGCCTTACCATTAGGAACTGGGGCTTATTCGGCCGCTACCTATTT
CTTCAACGACTTGGCCGAGCACAATGACGCCCAAAACGCCACTATCCAAT
ACAAAGAAGACTTGAGCGGAACGAGCCTGGTGCCTAATTTGGCAGCCTAC
CCCACATACGCCCTGGTAGGCACGCAAACTGTCTCCAAATTCCACGCAGC
GGATGCAGCGTTGTTGCCTGTTCGGATATACCTAGTCAATGTTCGTCTCC
AACAGACGGGCACAGACGTACTTCTGACGCTAAACCTGCCCGCCCTGGCG
CAAGCACCTGCTGCTGCTTCTTTCAATGCGGCGATGTTTGTCAAGTGACA
TACGACAAGTTCCCGACAACCAAGAAGTGTTCATCGACGATGCCTCAGAC
GCCTCCCTCATCCTCGAGCTCTTGGATTTGGAGCGTGACAAGGAGGGACT
GGAGTCCGTTCGCACGCGCTTTTCGGTGGCGCCATCACGATTTCCCTTCC
AGCTTCCTTCTCCAGTGCCAGATGACCAGAAAGGAAAAAAGTATTTCGGA
AAAAGGCGGTGCAATTAGAATTAGAGAATCAGTACAGCATGAGTATACAC
ACATCACAGCCAGACAAGACGGAGTCGGGTGGGCATTCAGTATACGTCTC
TTAAAAGTCTCAAACAATGCATTAATTAAGTCGAGAGAAGCGTAAGGAAA
CGTGTGCCCCGATTCAGGGATGGCAGCTTTACAGGAAGCGCTAGCAAGCC
TTACCATTAGGAACTGGGGCTTATTCGGCCGCTACCTATTTCTTCAACGA
CTTGGCCGAGCACAATGACGCCCAAAACGCCACTATCCAATACAAAGAAG
ACTTGAGCGGAACGAGCCTGGTGCCTAATTTGGCAGCCTACCCCACATAC
GCCCTGGTAGGCACGCAAACTGTCTCCAAATTCCACGCAGCGGATGCAGC
GTTGTTGCCTGTTCGGATATACCTAGTCAATGTTCGTCTCCAACAGACGG
GCACAGACGTACTTCTGACGCTAAACCTGCCCGCCCTGGCGCAAGCACCT
GCTGCTGCTTCTTTCAATGCGGCGATGTTTGTCAAGTGACATACGACAAG
TTCCCGACAACCAAGAAGTGTTCATCGACGATGCCTCAGACGCCTCCCTC
ATCCTCGAGCTCTTGGATTTGGAGCGTGACAAGGAGGGACTGGAGTCCGT
TCGCACGCGCTTTTCGGTGGCGCCATCACGATTTCCCTTCCAGCTTCCTT
CTCCAGTGCCAGATGACCAGAAAGGAAAAAAGTATTTCGGAAAAAG back to top
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