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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100662g1.4385.mrna |
| Orig protein id | gnl|cribi|Naga_100662g1.4385 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:830238..831876 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6203 ID=rna6203|Name=rna6203|organism=Nannochloropsis gaditana|type=mRNA|length=525bp
ATGCAGCATGAGGTCCTTTTGGCCGCCTTGGGCATCCCTGGGGACGTCAT
AATTCCCGTGCGACTTCCCGGTTCCTCCACCTCCTCCTCTTCCTGCTCCT
CTCTCACGTATCAGGTGGCTCCGGACATCACTTTTTTAAGCGCCGCGGAG
AAGGAAATAATCAACCGCATCGTGTGCCTGGGTGCCTATTATCATCGACT
GGACGCCTTTGTTGCCGCACACCGATTCGGAGGGGGGGACAACGCGGACG
TCCTCATAGGCAGACAGGGCACAGAGACTTCCCAAGAGGGGGACCAGGGG
CCCCAAGGAAGCTTATATCTGCAGGCTTTGGCGGTCGGAATTGAAGAGGG
GCTTTTGCGACGGTATGCAGGTACCATCGCCGGATTGGAGCGAGCGATGG
CGGCCGACCCTCGCCTGCCTCTGTCTCACGCGCATCACACGTTGGGAAGG
GAAGGTGACTTCCACGTGCTCCTGCCCGCCGTCGTGGGGATGGTGGAGAA
GCTGGGAAGGAGGCAGTGCCGGTGA back to topprotein sequence of rna6203 >rna6203-protein ID=rna6203-protein|Name=rna6203|organism=Nannochloropsis gaditana|type=polypeptide|length=358bp
PLLPPSLPPPLLPSFPPALPSRYILPLSCLSPAQEALLALLGSVMRFLRL
AREVAGRERKMLTKRYLEVVVRETAEIHRLFVKQVHAFRVLVDGVPEGEE
LSVRLAATHHLPDPPPPRPSTPPSSTPSLPPSVKEEGEAVGGKVDREIPG
VHVPPRLGQAPHPCDEPPRAQEREKRRPRSPQQRPGASQEREGQHAPVNH
RLRRPEEPYYPMVESTHPPAPVTRPLAPGPTLPCKLPSSRPIQEEPRAWH
AAKSGSGRPLSFLPLPDSRSHPPPSSVPLPSASSFRPSPTPQLPSSLPLH
PGTSSSLPSHLPPHRNVDAHGGKEGVGGRDTASEGSFETLDEHMQRLRVS
WRKTAPSN back to topmRNA from alignment at CM002467.1:830238..831876+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6203 ID=rna6203|Name=rna6203|organism=Nannochloropsis gaditana|type=mRNA|length=1639bp|location=Sequence derived from alignment at CM002467.1:830238..831876+ (Nannochloropsis gaditana)
Cccctactccctccctccctccctccccccctccttccctccttccctcc
tgctctcccttctcgctacattctccccctctcctgtctctctcccgccc
aggAGGCTTTGCTCGCCCTCTTAGGGTCCGTGatgcgcttcctccgcttg
gCGCGCGAGGtggctgggagggagaggaagatgctGACCAAGGTAGGTGT
CTCTACAGATATATAGACGTACTTGTAGACATatagggagggaaagcagg
cgggggagggaagctggAGCCAGGCAGATCATTCGAGGGATGCGGGAGGT
CGGTACCTGAGTCCATccacccccatccccccccgccttcagCGCTacct
ggaggtggtggtgcgagAAACAGCCGAAATTCACCGGCTGTTCGTGAAGC
AGGTGAGATGTGCGCAATGGAGGGACAAACGGataacgagggagggaggg
agggaaggaaaataaaTACGGGGAGCATATTGACGCCATATCCTATGCGT
GTGCGTGTAACTTGCACCTTACTGTTGctcaccttctccctccccccctc
cccccctccctccctccctccctccctccctttctcgcccAGGTTCACGC
cttccgcgtcctcgtcgacgGGGTCCCcgaaggggaagagctcTCCGTGC
GCCTCGCCGCCACCCACCATCTcccagaccctcctccaccccgcccttca
acccctccctcgtccacgccctccctcccgccctccgtaaaggaggaggg
cgaagcgGTTGGAGGAAAAGTTGACAGGGAGATACCCGGAGTTCATGTCC
CGCCGCGCCTTGGACAGGCACCGCACCCTTGTGACGAGCCACCGCGGGCG
CAAGAACGAGAAAAACGACGGCCGAGAAGCCCGCAGCAAAGACCAGGCGC
CTcccaggaaagggaagggcagcaTGCACCCGTCAACCACAGGCTTCGCC
GGCCCGAAGAACCCTATTATCCCATGGTAGAAAGCACGCATCCTCCTGCG
CCAGTCACCAGGCCGCTTGCACCGGGGCCCACGCTGCCTTGCAAGCTGCC
TTCCTCGCGTCCCATCCAGGAGGAACCGCGGGCGTGGCACGCCGCGAAAA
GTGGCTCGGGGAggccgctctccttccttcctctccctgactctcgctcc
cacccacctccttcctctgtgcCTCtaccctccgcgtcctccttccgccc
atCGCCAACACCGCagctgccttcctccctgcccctccaccccggcACTA
GTTCCTCTTTGCCgtctcacctccctccccatcggaATGTGGATGCCcac
ggggggaaagagggtgtaGGTGGGAGGGACACGGCTTCAGAGGGCAGCTT
CGAGACTCTCGACGAGCACATGCAGCGACTCCGAGTGTCGTGGAGGAAAA
CCGCCCCCAGCAACTAGATGCGAGCCGAGGTAGCacagggaggcgaaggg
ggcgAAAAGAGAATAGGATGCGTGGCGTCGAGGGGGcaagaggacgagaa
agattAAGAGCGCGAATGAGGATGCAACGACAAGAAGGGTTTCTCAAGGC
AGAACATCCCTCTCTGCGCCAGAAAAGTTCGCATTGATAGGATTCCTTGC
CTGCCCAGAAAGAAAACCGTTCCAAGGGTCTCCGTTTTC back to topCoding sequence (CDS) from alignment at CM002467.1:830238..831876+ >rna6203 ID=rna6203|Name=rna6203|organism=Nannochloropsis gaditana|type=CDS|length=3231bp|location=Sequence derived from alignment at CM002467.1:830238..831876+ (Nannochloropsis gaditana)
Cccctactccctccctccctccctccccccctccttccctccttccctcc
tgctctcccttctcgctacattctccccctctcctgtctctctcccgccc
aggAGGCTTTGCTCGCCCTCTTAGGGTCCGTGatgcgcttcctccgcttg
gCGCGCGAGGtggctgggagggagaggaagatgctGACCAAGCGCTacct
ggaggtggtggtgcgagAAACAGCCGAAATTCACCGGCTGTTCGTGAAGC
AGGTTCACGCcttccgcgtcctcgtcgacgGGGTCCCcgaaggggaagag
ctcTCCGTGCGCCTCGCCGCCACCCACCATCTcccagaccctcctccacc
ccgcccttcaacccctccctcgtccacgccctccctcccgccctccgtaa
aggaggagggcgaagcgGTTGGAGGAAAAGTTGACAGGGAGATACCCGGA
GTTCATGTCCCGCCGCGCCTTGGACAGGCACCGCACCCTTGTGACGAGCC
ACCGCGGGCGCAAGAACGAGAAAAACGACGGCCGAGAAGCCCGCAGCAAA
GACCAGGCGCCTcccaggaaagggaagggcagcaTGCACCCGTCAACCAC
AGGCTTCGCCGGCCCGAAGAACCCTATTATCCCATGGTAGAAAGCACGCA
TCCTCCTGCGCCAGTCACCAGGCCGCTTGCACCGGGGCCCACGCTGCCTT
GCAAGCTGCCTTCCTCGCGTCCCATCCAGGAGGAACCGCGGGCGTGGCAC
GCCGCGAAAAGTGGCTCGGGGAggccgctctccttccttcctctccctga
ctctcgctcccacccacctccttcctctgtgcCTCtaccctccgcgtcct
ccttccgcccatCGCCAACACCGCagctgccttcctccctgcccctccac
cccggcACTAGTTCCTCTTTGCCgtctcacctccctccccatcggaATGT
GGATGCCcacggggggaaagagggtgtaGGTGGGAGGGACACGGCTTCAG
AGGGCAGCTTCGAGACTCTCGACGAGCACATGCAGCGACTCCGAGTGTCG
TGGAGGAAAACCGCCCCCAGCAACTAGCccctactccctccctccctccc
tccccccctccttccctccttccctcctgctctcccttctcgctacattc
tccccctctcctgtctctctcccgcccaggAGGCTTTGCTCGCCCTCTTA
GGGTCCGTGatgcgcttcctccgcttggCGCGCGAGGtggctgggaggga
gaggaagatgctGACCAAGCGCTacctggaggtggtggtgcgagAAACAG
CCGAAATTCACCGGCTGTTCGTGAAGCAGGTTCACGCcttccgcgtcctc
gtcgacgGGGTCCCcgaaggggaagagctcTCCGTGCGCCTCGCCGCCAC
CCACCATCTcccagaccctcctccaccccgcccttcaacccctccctcgt
ccacgccctccctcccgccctccgtaaaggaggagggcgaagcgGTTGGA
GGAAAAGTTGACAGGGAGATACCCGGAGTTCATGTCCCGCCGCGCCTTGG
ACAGGCACCGCACCCTTGTGACGAGCCACCGCGGGCGCAAGAACGAGAAA
AACGACGGCCGAGAAGCCCGCAGCAAAGACCAGGCGCCTcccaggaaagg
gaagggcagcaTGCACCCGTCAACCACAGGCTTCGCCGGCCCGAAGAACC
CTATTATCCCATGGTAGAAAGCACGCATCCTCCTGCGCCAGTCACCAGGC
CGCTTGCACCGGGGCCCACGCTGCCTTGCAAGCTGCCTTCCTCGCGTCCC
ATCCAGGAGGAACCGCGGGCGTGGCACGCCGCGAAAAGTGGCTCGGGGAg
gccgctctccttccttcctctccctgactctcgctcccacccacctcctt
cctctgtgcCTCtaccctccgcgtcctccttccgcccatCGCCAACACCG
CagctgccttcctccctgcccctccaccccggcACTAGTTCCTCTTTGCC
gtctcacctccctccccatcggaATGTGGATGCCcacggggggaaagagg
gtgtaGGTGGGAGGGACACGGCTTCAGAGGGCAGCTTCGAGACTCTCGAC
GAGCACATGCAGCGACTCCGAGTGTCGTGGAGGAAAACCGCCCCCAGCAA
CTAGCccctactccctccctccctccctccccccctccttccctccttcc
ctcctgctctcccttctcgctacattctccccctctcctgtctctctccc
gcccaggAGGCTTTGCTCGCCCTCTTAGGGTCCGTGatgcgcttcctccg
cttggCGCGCGAGGtggctgggagggagaggaagatgctGACCAAGCGCT
acctggaggtggtggtgcgagAAACAGCCGAAATTCACCGGCTGTTCGTG
AAGCAGGTTCACGCcttccgcgtcctcgtcgacgGGGTCCCcgaagggga
agagctcTCCGTGCGCCTCGCCGCCACCCACCATCTcccagaccctcctc
caccccgcccttcaacccctccctcgtccacgccctccctcccgccctcc
gtaaaggaggagggcgaagcgGTTGGAGGAAAAGTTGACAGGGAGATACC
CGGAGTTCATGTCCCGCCGCGCCTTGGACAGGCACCGCACCCTTGTGACG
AGCCACCGCGGGCGCAAGAACGAGAAAAACGACGGCCGAGAAGCCCGCAG
CAAAGACCAGGCGCCTcccaggaaagggaagggcagcaTGCACCCGTCAA
CCACAGGCTTCGCCGGCCCGAAGAACCCTATTATCCCATGGTAGAAAGCA
CGCATCCTCCTGCGCCAGTCACCAGGCCGCTTGCACCGGGGCCCACGCTG
CCTTGCAAGCTGCCTTCCTCGCGTCCCATCCAGGAGGAACCGCGGGCGTG
GCACGCCGCGAAAAGTGGCTCGGGGAggccgctctccttccttcctctcc
ctgactctcgctcccacccacctccttcctctgtgcCTCtaccctccgcg
tcctccttccgcccatCGCCAACACCGCagctgccttcctccctgcccct
ccaccccggcACTAGTTCCTCTTTGCCgtctcacctccctccccatcgga
ATGTGGATGCCcacggggggaaagagggtgtaGGTGGGAGGGACACGGCT
TCAGAGGGCAGCTTCGAGACTCTCGACGAGCACATGCAGCGACTCCGAGT
GTCGTGGAGGAAAACCGCCCCCAGCAACTAG back to top
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