EWM24482.1, cds6188 (CDS) Nannochloropsis gaditana

Overview
NameEWM24482.1
Unique Namecds6188
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:830238..830429 +
Alignment locationCM002467.1:830580..830639 +
Alignment locationCM002467.1:830830..831654 +

Link to JBrowse

Properties
Property NameValue
Start range830238
Start range.
Protein idEWM24482.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100662g1.4385.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:830238..830429 +
CM002467.1supercontigCM002467.1:830580..830639 +
CM002467.1supercontigCM002467.1:830830..831654 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24482.1 vs. NCBI_GenBank
Match: gi|585105956|gb|EWM24482.1| (hypothetical protein Naga_100662g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0 
Query:    1 PLLPPSLPPPLLPSFPPALPSRYILPLSCLSPAQEALLALLGSVMRFLRLAREVAGRERKMLTKRYLEVVVRETAEIHRLFVKQVHAFRVLVDGVPEGEELSVRLAATHHLPDPPPPRPSTPPSSTPSLPPSVKEEGEAVGGKVDREIPGVHVPPRLGQAPHPCDEPPRAQEREKRRPRSPQQRPGASQEREGQHAPVNHRLRRPEEPYYPMVESTHPPAPVTRPLAPGPTLPCKLPSSRPIQEEPRAWHAAKSGSGRPLSFLPLPDSRSHPPPSSVPLPSASSFRPSPTPQLPSSLPLHPGTSSSLPSHLPPHRNVDAHGGKEGVGGRDTASEGSFETLDEHMQRLRVSWRKTAPSN 358
            PLLPPSLPPPLLPSFPPALPSRYILPLSCLSPAQEALLALLGSVMRFLRLAREVAGRERKMLTKRYLEVVVRETAEIHRLFVKQVHAFRVLVDGVPEGEELSVRLAATHHLPDPPPPRPSTPPSSTPSLPPSVKEEGEAVGGKVDREIPGVHVPPRLGQAPHPCDEPPRAQEREKRRPRSPQQRPGASQEREGQHAPVNHRLRRPEEPYYPMVESTHPPAPVTRPLAPGPTLPCKLPSSRPIQEEPRAWHAAKSGSGRPLSFLPLPDSRSHPPPSSVPLPSASSFRPSPTPQLPSSLPLHPGTSSSLPSHLPPHRNVDAHGGKEGVGGRDTASEGSFETLDEHMQRLRVSWRKTAPSN
Sbjct:    1 PLLPPSLPPPLLPSFPPALPSRYILPLSCLSPAQEALLALLGSVMRFLRLAREVAGRERKMLTKRYLEVVVRETAEIHRLFVKQVHAFRVLVDGVPEGEELSVRLAATHHLPDPPPPRPSTPPSSTPSLPPSVKEEGEAVGGKVDREIPGVHVPPRLGQAPHPCDEPPRAQEREKRRPRSPQQRPGASQEREGQHAPVNHRLRRPEEPYYPMVESTHPPAPVTRPLAPGPTLPCKLPSSRPIQEEPRAWHAAKSGSGRPLSFLPLPDSRSHPPPSSVPLPSASSFRPSPTPQLPSSLPLHPGTSSSLPSHLPPHRNVDAHGGKEGVGGRDTASEGSFETLDEHMQRLRVSWRKTAPSN 358
The following BLAST results are available for this feature:
BLAST of EWM24482.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105956|gb|EWM24482.1|0.000e+0100.00hypothetical protein Naga_100662g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6203rna6203Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications