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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101272g2.7596.mrna |
| Orig protein id | gnl|cribi|Naga_101272g2.7596 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:826312..827830 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6201 ID=rna6201|Name=rna6201|organism=Nannochloropsis gaditana|type=mRNA|length=1428bp
CGGGCATCGTCTTGCTGACTCCGTGACGGCACGTTTCCTACCCCCCGATA
AGGACCGCGCTTGGCGTATTTTGTTCTTCCTGTACCAAGGGATAGGTCCA
TACATGCTGGCTTAAAATCTTCTATAAGCTGACTTCATGTCTACGAGGGC
GAATACATGCTTGGTGTCTGGTGTCGTGGATTTGGCAATCCAAGGCATTG
AATGTTTTTGTTTTCGGACGGGTTTCGACAGCCTGTTCAATTTCTCCTCG
CTTAAAGGTAACAGCCAGGGAAAACTCAATTTCACACTCATCTACCTCCA
GTCACTCACAAGTGCGAGCCATGGGTTGCTGTGGAAGCAGACCATCGACT
GCTTCCCGTTGCGCGGCTAAAAATTCTACAATTCCACCATCCCCTGTGGC
GCCATTGCAAGGGGAGGAACTACGCGCATGTTTCGTTACCCCCCCCGCCT
CTGCCACCACCAATAACCTTCCATCGCGCTTCCTTCTCTACCGTCTCCCT
TGGGAGGGAACTACCAGCACTATCTTTGATGACTGGCGCCAGCTTCCCTA
CGTGGAAGTTGTCACCCTCGTGCTCCCGGCCCGGCTGGGGAAATCAATAA
CGAAGCATCCAAAGAATGTACGCGTCATGGCGAATCACCTCGCCCACGCC
ATCAGCAGCTCCCTGAACAATAAAGATGCACAAAAAAAAGGCCCAGGAAA
AGAAAGAGCGCCAGCTCCGGCACAGCCCTTCGTCCTCTTCGGCCACAGTT
TTATGGGGGGTCTTCTAGCGTTGGAGGTCGCGCGCGCTTTAATCGACATC
TACCGCTTGCCGCCTCACAGCATTGTCATCTCCGCTTGCCCCTCCCCTCC
CGCCTCGTCCTCCCCCTCGTCCTACTCGACCCGCCTCTCTTCGCTCCCCA
CGCCCCAGCTCCTTGCCTTCCTTGTTTCCACCGGCGCCCTGTCCGCCCAC
CTCGCGCAGAGCAAAGAGACGAGGACAACCCTCCTCCCCCTCTTCAAGGC
TGACCTCGCTGCAGTCGACGCCTACATGCTCTCCCCCTCTTCCTCCCTCC
CTTCCTCCCTCCCTCTCCCCTGCCCTCTCCTGGCCATCGCCTGTGAGGGC
GACACTCTGGCAACCGCTGAGAGCATGGAGGGCTGGCGCTCTTTCACCTC
CTCCTCCTTCAGCCTCTCCTCCCTCCCTCTCTCCCTCCCTCCTTCCACGG
ACCGCCACCACCACGTCCGTCCTGCCTCGGAGGCACTTTTTCGTGCCCTT
TCCCTACACCTTCACCGTCAACCCATTCTCACACGCGACGTCCAGGTGCT
TCTTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCTTTCTCTGCCTCCCTCT
CTCCCCATGTTCCATCCTGTCCGTTTTCACTTCTGGCAGCAACAGTTTCG
TGGCGTTGCTCTGTTCATCCCTGTATAC back to topprotein sequence of rna6201 >rna6201-protein ID=rna6201-protein|Name=rna6201|organism=Nannochloropsis gaditana|type=polypeptide|length=162bp
MASSIRLLPSALKARHAALFALGIGGAAGAIRYQTDEGTRRSVYFWSRAF
PIYLHYRYVKSQVQHLPEAEQEEAYAPLHQKYAPEAVDIILHLKGFYIKI
AQVGSTRSDFLPQEYLSRLEIFQGDIPCTEPFTAIQDTVERSLGKPLPEV
FAEFDHIPVGAA back to topmRNA from alignment at CM002467.1:826312..827830- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6201 ID=rna6201|Name=rna6201|organism=Nannochloropsis gaditana|type=mRNA|length=1519bp|location=Sequence derived from alignment at CM002467.1:826312..827830- (Nannochloropsis gaditana)
GAACGGCTCGGGACAAGGGAAAAAAATATGTATTTAGAACATTTGCAGGC
TGGATAATTGGGAGAGAGGGGATAGATGGCGTCTAGCATTAGACTGCTTC
CCTCAGCTCTTAAAGCGAGGCATGCTGGTAAGTGAGTTGCGTGCGCCGCA
TGGCGTGAAGCGTGCAGTCTTGTCACAGAGCACGCCCAACACGACATTGC
ATTGTATCGTTTATTTCATTTCCATCTCCGCTCTCCTTTTCTTTCTCTCC
TTCCCTCATTTCTTCCTCCCCTCCTTCCCATCCTCCCTTCCTGTCCGCTC
ATGCCCCATCACAGCCCTCTTTGCTCTCGGCATCGGGGGAGCTGCAGGCG
CGATCAGATACCAAACAGACGAAGGCACAAGGCGCTCCGTCTATTTTTGG
TCTAGGGCATTTCCCATCTACCTGCACTATCGCTACGTAAGTGGTGTTCA
AGGAAGCTTGGCTATTTTTCACGGGAAAAGCTCGGTGCGGAAGTAGGTGT
ACAGCAACCACTTACCGCAATCCGACTCACCCAAGAAACATGAAACCCTG
AATCCGTGTCGTGCACCGCCCCTAGCCGCCTCTCCCTCCCGCCCGCTCAC
CTTCCTCCTCCCCTTCCTCATCCCCTCTCTGCCCGCACGGACCTATTCGC
ATTTCCCGCTCGCCCTTTTCAGGTGAAGAGTCAGGTGCAGCATTTACCGG
AAGCAGAACAAGAGGAGGCCTACGCGCCTCTCCACCAGAAATATGCCCCG
GAGGCGGTGGATATCATCTTGCATCTGAAGGGCTTCTACATCAAGGTACC
GATCAGGATGGGGAGGAGGAAGTAACGGCAAGCGGTTTAAAAGTGAAAGA
GAGGCCAAAGACAGTCGTTCACGTTTCCTTTCCTGCCCACCCCCGAACCC
GTTGCCTTGGAATAGATCGCACAAGTGGGCAGCACTCGGAGCGATTTGTA
AGTCCTCCTCCAGCGCTCCATCTCCTTCATCCCCTCCTTCCCTCCCTCCC
TCCTCCCCTCCTTTCCTGCCTCCCTCCTTCCCTCCTTCTTCCCTTCCCTC
CTTCCCTCCCCCCCCCCCCTATCATTCCACCCACATCCATGTCTTTCCCC
TTCGCAACCGGCGTGCTCCTCCCGCTCGCCCCTCATGTGGACCCAACTCC
ATCCCCCTCCGCCTTCCCCCCACTGCTTCCCTCCTTCCCTTCGCCTTCTT
CCCCTCCTTCCCTCCCTCCCTCCCTCCTTCGTGTCACAAGCCTCCCCCAG
GAGTACCTTTCGCGCCTCGAAATATTCCAAGGAGACATTCCGTGCACGGA
ACCCTTCACGGCGATTCAAGGTAAGGACGGGGGGAGGGAGGGAGGGAGGG
AAGGTTGGAGGGGGGAGGGGAGGGAGAGAGGGGGTCCTATTGGTCACTTG
GATCCCTCTCACACGCCCGTGGGGACCCTCCGTGTCCCTCAGACACAGTG
GAGCGCTCTCTGGGAAAGCCCCTGCCCGAGGTCTTCGCCGAGTTCGACCA
CATCCCCGTGGGTGCAGCC back to topCoding sequence (CDS) from alignment at CM002467.1:826312..827830- >rna6201 ID=rna6201|Name=rna6201|organism=Nannochloropsis gaditana|type=CDS|length=2916bp|location=Sequence derived from alignment at CM002467.1:826312..827830- (Nannochloropsis gaditana)
ACACAGTGGAGCGCTCTCTGGGAAAGCCCCTGCCCGAGGTCTTCGCCGAG
TTCGACCACATCCCCGTGGGTGCAGCCCCTCCCCCAGGAGTACCTTTCGC
GCCTCGAAATATTCCAAGGAGACATTCCGTGCACGGAACCCTTCACGGCG
ATTCAAGATCGCACAAGTGGGCAGCACTCGGAGCGATTTGTGAAGAGTCA
GGTGCAGCATTTACCGGAAGCAGAACAAGAGGAGGCCTACGCGCCTCTCC
ACCAGAAATATGCCCCGGAGGCGGTGGATATCATCTTGCATCTGAAGGGC
TTCTACATCAAGCCCTCTTTGCTCTCGGCATCGGGGGAGCTGCAGGCGCG
ATCAGATACCAAACAGACGAAGGCACAAGGCGCTCCGTCTATTTTTGGTC
TAGGGCATTTCCCATCTACCTGCACTATCGCTACATGGCGTCTAGCATTA
GACTGCTTCCCTCAGCTCTTAAAGCGAGGCATGCTGACACAGTGGAGCGC
TCTCTGGGAAAGCCCCTGCCCGAGGTCTTCGCCGAGTTCGACCACATCCC
CGTGGGTGCAGCCCCTCCCCCAGGAGTACCTTTCGCGCCTCGAAATATTC
CAAGGAGACATTCCGTGCACGGAACCCTTCACGGCGATTCAAGATCGCAC
AAGTGGGCAGCACTCGGAGCGATTTGTGAAGAGTCAGGTGCAGCATTTAC
CGGAAGCAGAACAAGAGGAGGCCTACGCGCCTCTCCACCAGAAATATGCC
CCGGAGGCGGTGGATATCATCTTGCATCTGAAGGGCTTCTACATCAAGCC
CTCTTTGCTCTCGGCATCGGGGGAGCTGCAGGCGCGATCAGATACCAAAC
AGACGAAGGCACAAGGCGCTCCGTCTATTTTTGGTCTAGGGCATTTCCCA
TCTACCTGCACTATCGCTACATGGCGTCTAGCATTAGACTGCTTCCCTCA
GCTCTTAAAGCGAGGCATGCTGACACAGTGGAGCGCTCTCTGGGAAAGCC
CCTGCCCGAGGTCTTCGCCGAGTTCGACCACATCCCCGTGGGTGCAGCCC
CTCCCCCAGGAGTACCTTTCGCGCCTCGAAATATTCCAAGGAGACATTCC
GTGCACGGAACCCTTCACGGCGATTCAAGATCGCACAAGTGGGCAGCACT
CGGAGCGATTTGTGAAGAGTCAGGTGCAGCATTTACCGGAAGCAGAACAA
GAGGAGGCCTACGCGCCTCTCCACCAGAAATATGCCCCGGAGGCGGTGGA
TATCATCTTGCATCTGAAGGGCTTCTACATCAAGCCCTCTTTGCTCTCGG
CATCGGGGGAGCTGCAGGCGCGATCAGATACCAAACAGACGAAGGCACAA
GGCGCTCCGTCTATTTTTGGTCTAGGGCATTTCCCATCTACCTGCACTAT
CGCTACATGGCGTCTAGCATTAGACTGCTTCCCTCAGCTCTTAAAGCGAG
GCATGCTGACACAGTGGAGCGCTCTCTGGGAAAGCCCCTGCCCGAGGTCT
TCGCCGAGTTCGACCACATCCCCGTGGGTGCAGCCCCTCCCCCAGGAGTA
CCTTTCGCGCCTCGAAATATTCCAAGGAGACATTCCGTGCACGGAACCCT
TCACGGCGATTCAAGATCGCACAAGTGGGCAGCACTCGGAGCGATTTGTG
AAGAGTCAGGTGCAGCATTTACCGGAAGCAGAACAAGAGGAGGCCTACGC
GCCTCTCCACCAGAAATATGCCCCGGAGGCGGTGGATATCATCTTGCATC
TGAAGGGCTTCTACATCAAGCCCTCTTTGCTCTCGGCATCGGGGGAGCTG
CAGGCGCGATCAGATACCAAACAGACGAAGGCACAAGGCGCTCCGTCTAT
TTTTGGTCTAGGGCATTTCCCATCTACCTGCACTATCGCTACATGGCGTC
TAGCATTAGACTGCTTCCCTCAGCTCTTAAAGCGAGGCATGCTGACACAG
TGGAGCGCTCTCTGGGAAAGCCCCTGCCCGAGGTCTTCGCCGAGTTCGAC
CACATCCCCGTGGGTGCAGCCCCTCCCCCAGGAGTACCTTTCGCGCCTCG
AAATATTCCAAGGAGACATTCCGTGCACGGAACCCTTCACGGCGATTCAA
GATCGCACAAGTGGGCAGCACTCGGAGCGATTTGTGAAGAGTCAGGTGCA
GCATTTACCGGAAGCAGAACAAGAGGAGGCCTACGCGCCTCTCCACCAGA
AATATGCCCCGGAGGCGGTGGATATCATCTTGCATCTGAAGGGCTTCTAC
ATCAAGCCCTCTTTGCTCTCGGCATCGGGGGAGCTGCAGGCGCGATCAGA
TACCAAACAGACGAAGGCACAAGGCGCTCCGTCTATTTTTGGTCTAGGGC
ATTTCCCATCTACCTGCACTATCGCTACATGGCGTCTAGCATTAGACTGC
TTCCCTCAGCTCTTAAAGCGAGGCATGCTGACACAGTGGAGCGCTCTCTG
GGAAAGCCCCTGCCCGAGGTCTTCGCCGAGTTCGACCACATCCCCGTGGG
TGCAGCCCCTCCCCCAGGAGTACCTTTCGCGCCTCGAAATATTCCAAGGA
GACATTCCGTGCACGGAACCCTTCACGGCGATTCAAGATCGCACAAGTGG
GCAGCACTCGGAGCGATTTGTGAAGAGTCAGGTGCAGCATTTACCGGAAG
CAGAACAAGAGGAGGCCTACGCGCCTCTCCACCAGAAATATGCCCCGGAG
GCGGTGGATATCATCTTGCATCTGAAGGGCTTCTACATCAAGCCCTCTTT
GCTCTCGGCATCGGGGGAGCTGCAGGCGCGATCAGATACCAAACAGACGA
AGGCACAAGGCGCTCCGTCTATTTTTGGTCTAGGGCATTTCCCATCTACC
TGCACTATCGCTACATGGCGTCTAGCATTAGACTGCTTCCCTCAGCTCTT
AAAGCGAGGCATGCTG back to top
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