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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100883g3.3079.mrna |
| Orig protein id | gnl|cribi|Naga_100883g3.3079 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:815601..817030 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6195 ID=rna6195|Name=rna6195|organism=Nannochloropsis gaditana|type=mRNA|length=767bp
TGATTTCGGAATGCTCGTGTGCCGAGGAGCCGAGAGCAGCCGAGACAGAA
ATGTTCGTCGTTCGGGCGGCGGGGGGGTGGAAATGGCCTGGAAAACGACC
ACTGGTGCACGTGGGACGCGTACAAGTGGGATTTTGTCCTCGTTTGGTGT
TTGGGGTTGTGTGTGATCGTTGGTGTTGAGTGGGAAAGAAGGACCGTGAC
ATTTGTGGCACAAGAAGGTGCGTCCTCACATGAAATTTCTTCCTTCGCTG
GAAGTCTGTTGTTACACCACATGCATCCAAATCCAGCACCGCTTGCAAAT
AAATATCACTCGCAGAATATCCGTAAATTTTCGCTTTGCCCGAGTAAGTC
GTGTGTGGGGTGTCACTATTTCGCAGCTGTCTTAATGGAGAGCTTCACGT
TGACATTCCTCTGGTTGGTGAAACATGAAGTAAACACGCTCCGCATATCG
TTATCGCTACCGAGATTCATTGTTTAGATGCGATACAAGCATCTGAGGTA
CATTAGAACATCTTCATAAAATACTCTAGGGGTGGCACGAAAAAAATTAT
GGGGAACACCGGGTATATTAAGATCTCCCACGGCAGGGATTGCCCAAGCA
CATCGAGCCGCTTGCACGTTTTAAATATATATTATGCCTCTCTTGGAAAG
CCAAAATAAAATAAAATCTTTCGCTTATCACCCTGACGGCTTGAGTGTAT
TTAAATTGTGAAAGAAAAAGCAAGGGAGCAGAGAGCTACAATCACTACTC
TTTAATTTCTTCGATAT back to topprotein sequence of rna6195 >rna6195-protein ID=rna6195-protein|Name=rna6195|organism=Nannochloropsis gaditana|type=polypeptide|length=320bp
MDEAELNLGATLSPSRDEKEALLLLLSLPSVANVRVPDERDNTKRKPGPP
PRYFPITSFPSTAHVPSGRQCGIYPFLSPANRSPTFPGSNGGEPSDECSI
SSLSSGGTINSMDVDVSCALPQKNGSKRWMSQSVSAAVWDDEDGGETDQV
PMTSEDDDEEEEEEEEGEGWGEEEEEVAGEKKETYSSPLRSGQVAQRREG
TGREDAEGEVLQAVGAGEEEEEEEEEEGREDEEVVMVKADGSFLLLSDSP
WTRQSRRREREGTGLPSSPSLPPSLPHGPPRECGGQRVERQKEDGLLPTT
MMAALELRGLKEGVLVTEVG back to topmRNA from alignment at CM002467.1:815601..817030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6195 ID=rna6195|Name=rna6195|organism=Nannochloropsis gaditana|type=mRNA|length=1430bp|location=Sequence derived from alignment at CM002467.1:815601..817030+ (Nannochloropsis gaditana)
GGGACCATATCCCGTTAGTATTAAAGCTCAACTCACAAGCGCCTCTATAT
TGCTTGGTGTTCTCCCTTTTACTTAACTTCCTTTTTTCTAATTTTCCCCC
AAAACATTACTTACACGGACTGATAGCTGCTTGCTTCGCTTGGGGCGGCG
TTGGGACGCGAATGGATGAAGCAGAGCTCAATTTAGGGGCAACACTATCG
CCCTCGAGAGGTGCGTATGTGCCGTGCCGACCTTGAGGGAAACTGTATAG
CTCTTGGACAAGGCGAAGCATGTCGTGAAACCTTGCACCCACAAACACCA
TTTTCGAATCTTTACACACATCACACACATATCTATACACACGAAAGATG
AAAAAGAAGCTTTGTTGTTACTCCTGAGCCTCCCTTCGGTCGCAAACGTG
CGGGTACCCGACGAGCGTGACAACACGAAAAGAAAACCaggtccaccacc
acgctACTTTCCCATCACGAGTTTCCCATCCACGGCGCACGTACCAAGCG
GACGCCAGTGGTGAGTGTATGTGTAGTAAAAAGCGTACTTGGAGAGATCC
AATTTTCGACCGGAAGGATGCGTTTCTCCATATTTccgccggggggggga
aacgcaCACTccgtgaaggggagggtaaCAGCGAGAGTACGTAAATTCCT
CATCAATTTTTCCATCCTCTTTCGCCATCAGTGGCATATATCCTTTCCTA
TCTCCTGCGAATAGATCCCCGACTTTTCCGGGCTCTAACGGAGGAGAGCC
CAGCGATGAGTGCAGCATCAGCAGCCTAAGCAGCGGTGGTACAATTAACa
gcatggacgtggacgtTTCCTGCGCCCTTCCCCAGAAAAATGGGTCGAAA
AGGTGGATGTCACAATCGGTGTCCGCGGCGGTGTgggatgatgaggacgg
aggggagacCGACCAGGTGCCGATGACAAGtgaagacgacgacgaggagg
aggaggaggaagaagagggggaaggatggggggaggaggaggaagaggtg
gcaggagaaaagaaggagacgtaCTCAAGCCCTCTGAGATCCGGCCAAGT
CGcccagaggagggagggaacaggaagggaagacgcggagggagaagtcT
TACAAGCCGTGGGGgctggggaggaggaggaggaggaggaggaggaggaa
gggagagaggacgaggaggtggtgatggtgaaGGCGGACGGATCGTTTCT
ACTCCTTTCCGACTCGCCCTGGACTCGCCAGAgccggagaagggagaggg
aggggacgggtctgccttcctctccctccctccctccttccctccctcac
ggcCCTCCACGGGAGTGCGGGGGGCAACGGGTAGAGAGGCAAAAAGAAGA
TGGCTTACTGCCGACCACGAtgatggcggccttggagttACGAGGGCTCA
AAGAGGGCGTCTTGGTCACCGAGGTGGGGA back to topCoding sequence (CDS) from alignment at CM002467.1:815601..817030+ >rna6195 ID=rna6195|Name=rna6195|organism=Nannochloropsis gaditana|type=CDS|length=2883bp|location=Sequence derived from alignment at CM002467.1:815601..817030+ (Nannochloropsis gaditana)
ATGGATGAAGCAGAGCTCAATTTAGGGGCAACACTATCGCCCTCGAGAGA
TGAAAAAGAAGCTTTGTTGTTACTCCTGAGCCTCCCTTCGGTCGCAAACG
TGCGGGTACCCGACGAGCGTGACAACACGAAAAGAAAACCaggtccacca
ccacgctACTTTCCCATCACGAGTTTCCCATCCACGGCGCACGTACCAAG
CGGACGCCAGTGTGGCATATATCCTTTCCTATCTCCTGCGAATAGATCCC
CGACTTTTCCGGGCTCTAACGGAGGAGAGCCCAGCGATGAGTGCAGCATC
AGCAGCCTAAGCAGCGGTGGTACAATTAACagcatggacgtggacgtTTC
CTGCGCCCTTCCCCAGAAAAATGGGTCGAAAAGGTGGATGTCACAATCGG
TGTCCGCGGCGGTGTgggatgatgaggacggaggggagacCGACCAGGTG
CCGATGACAAGtgaagacgacgacgaggaggaggaggaggaagaagaggg
ggaaggatggggggaggaggaggaagaggtggcaggagaaaagaaggaga
cgtaCTCAAGCCCTCTGAGATCCGGCCAAGTCGcccagaggagggaggga
acaggaagggaagacgcggagggagaagtcTTACAAGCCGTGGGGgctgg
ggaggaggaggaggaggaggaggaggaggaagggagagaggacgaggagg
tggtgatggtgaaGGCGGACGGATCGTTTCTACTCCTTTCCGACTCGCCC
TGGACTCGCCAGAgccggagaagggagagggaggggacgggtctgccttc
ctctccctccctccctccttccctccctcacggcCCTCCACGGGAGTGCG
GGGGGCAACGGGTAGAGAGGCAAAAAGAAGATGGCTTACTGCCGACCACG
AtgatggcggccttggagttACGAGGGCTCAAAGAGGGCGTCTTGGTCAC
CGAGGTGGGGAATGGATGAAGCAGAGCTCAATTTAGGGGCAACACTATCG
CCCTCGAGAGATGAAAAAGAAGCTTTGTTGTTACTCCTGAGCCTCCCTTC
GGTCGCAAACGTGCGGGTACCCGACGAGCGTGACAACACGAAAAGAAAAC
CaggtccaccaccacgctACTTTCCCATCACGAGTTTCCCATCCACGGCG
CACGTACCAAGCGGACGCCAGTGTGGCATATATCCTTTCCTATCTCCTGC
GAATAGATCCCCGACTTTTCCGGGCTCTAACGGAGGAGAGCCCAGCGATG
AGTGCAGCATCAGCAGCCTAAGCAGCGGTGGTACAATTAACagcatggac
gtggacgtTTCCTGCGCCCTTCCCCAGAAAAATGGGTCGAAAAGGTGGAT
GTCACAATCGGTGTCCGCGGCGGTGTgggatgatgaggacggaggggaga
cCGACCAGGTGCCGATGACAAGtgaagacgacgacgaggaggaggaggag
gaagaagagggggaaggatggggggaggaggaggaagaggtggcaggaga
aaagaaggagacgtaCTCAAGCCCTCTGAGATCCGGCCAAGTCGcccaga
ggagggagggaacaggaagggaagacgcggagggagaagtcTTACAAGCC
GTGGGGgctggggaggaggaggaggaggaggaggaggaggaagggagaga
ggacgaggaggtggtgatggtgaaGGCGGACGGATCGTTTCTACTCCTTT
CCGACTCGCCCTGGACTCGCCAGAgccggagaagggagagggaggggacg
ggtctgccttcctctccctccctccctccttccctccctcacggcCCTCC
ACGGGAGTGCGGGGGGCAACGGGTAGAGAGGCAAAAAGAAGATGGCTTAC
TGCCGACCACGAtgatggcggccttggagttACGAGGGCTCAAAGAGGGC
GTCTTGGTCACCGAGGTGGGGAATGGATGAAGCAGAGCTCAATTTAGGGG
CAACACTATCGCCCTCGAGAGATGAAAAAGAAGCTTTGTTGTTACTCCTG
AGCCTCCCTTCGGTCGCAAACGTGCGGGTACCCGACGAGCGTGACAACAC
GAAAAGAAAACCaggtccaccaccacgctACTTTCCCATCACGAGTTTCC
CATCCACGGCGCACGTACCAAGCGGACGCCAGTGTGGCATATATCCTTTC
CTATCTCCTGCGAATAGATCCCCGACTTTTCCGGGCTCTAACGGAGGAGA
GCCCAGCGATGAGTGCAGCATCAGCAGCCTAAGCAGCGGTGGTACAATTA
ACagcatggacgtggacgtTTCCTGCGCCCTTCCCCAGAAAAATGGGTCG
AAAAGGTGGATGTCACAATCGGTGTCCGCGGCGGTGTgggatgatgagga
cggaggggagacCGACCAGGTGCCGATGACAAGtgaagacgacgacgagg
aggaggaggaggaagaagagggggaaggatggggggaggaggaggaagag
gtggcaggagaaaagaaggagacgtaCTCAAGCCCTCTGAGATCCGGCCA
AGTCGcccagaggagggagggaacaggaagggaagacgcggagggagaag
tcTTACAAGCCGTGGGGgctggggaggaggaggaggaggaggaggaggag
gaagggagagaggacgaggaggtggtgatggtgaaGGCGGACGGATCGTT
TCTACTCCTTTCCGACTCGCCCTGGACTCGCCAGAgccggagaagggaga
gggaggggacgggtctgccttcctctccctccctccctccttccctccct
cacggcCCTCCACGGGAGTGCGGGGGGCAACGGGTAGAGAGGCAAAAAGA
AGATGGCTTACTGCCGACCACGAtgatggcggccttggagttACGAGGGC
TCAAAGAGGGCGTCTTGGTCACCGAGGTGGGGA back to top
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