rna6189, rna6189 (mRNA) Nannochloropsis gaditana

Overview
Namerna6189
Unique Namerna6189
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length776
Alignment locationCM002467.1:804106..804446 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101241g1.10483.mrna
Orig protein idgnl|cribi|Naga_101241g1.10483
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:804106..804446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101241g1gene5979Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6189rna6189-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24500.1cds6174Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6189 ID=rna6189|Name=rna6189|organism=Nannochloropsis gaditana|type=mRNA|length=776bp
ATTATGTAGTGCTTGAAAGTGTATGGTTCCGATGAATAGGTGCTGTTTGA
AAAGAAATATTCACGCGCTCTCATCTCTCTCGTAGTGAAGGGAACGCCTA
GGGCCAATTTGCCCCGATCACTCGGTGAACAAGCTTTGCACAATGCCTAC
CGCGCTGGAAACGAAAATGAAGGATGCTGTTGCAGAGCTTCGAGCTACGT
TCGAATCCGGGGTCACTCTACCATATAAATGGCGTGAGGAGCAACTTAAG
GCATTGGAAGCGATGATCAAGGGGCATAAGAAGGAGATCTTAGCGGCTAT
ACATAAGGATTTGCGGAAGCCCGAAGCAGAGGCAGACATAACAGAGCTTG
CGGTGGCTGAGCACGAAGTTCGGGACACCCTTAAGCACCTCCATGAATGG
ATGCAGCCCGAAGAAGTGCCTACCCCTGCGTGGCTCGTGCCTGCCAAATG
TGAGCTTCACCGGGACCCGTACGGCGTCGTCCTGGTCATCTCCCCCTTCA
ACTACCCTTTCCAGTTGGCTTTCACGCCCCTCATGAACGCCCTGGCCGCA
GGAAACTGCGTCTTGCTCAAGCCCTCCGAGCTTACTCCCAGCGTCGCTGC
CCTACTATCTCGCCTCCTTCCAGCCTACCTGGACCGGCGGGCGGTGCACG
TCGTGGAAGGGGCCGTCGCAGAGACAAGTGCCCTGCTCGCGCAGCGCTGG
GACTTAGTCTTCTTCACGGGGAGCGAGACCGTGGGAAGGATCGTCCATCA
GGTCGGGGGGGAGGGCGGGAAGGAGG
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protein sequence of rna6189

>rna6189-protein ID=rna6189-protein|Name=rna6189|organism=Nannochloropsis gaditana|type=polypeptide|length=75bp
MMRSFLKSCSRLLALTTSMLPGPMIYRFLWERFRRTRARRGAVGDSVPPA
RDDGSRCMRLGRGLSDTIHHQLWSS
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mRNA from alignment at CM002467.1:804106..804446-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6189 ID=rna6189|Name=rna6189|organism=Nannochloropsis gaditana|type=mRNA|length=341bp|location=Sequence derived from alignment at CM002467.1:804106..804446- (Nannochloropsis gaditana)
ATGATGCGGAGCTTCCTGAAGTCATGCTCGCGGTTGCTCGCTTTAACTAC
ATCGATGTTACCAGGGCCTATGATTTAGTGTGAGCCCCGCCCTTTGGCCG
CGTAGATGCTAACAAAGCGCTCGAAGGGAGTGCGTGTCCGAAGATGTTTC
AGTCTTTGCATCGCTGACTTGAGTCGAAAGGGGGGAAAAGTCGTTTTCTT
TGGGAAAGATTTCGCCGGACGCGTGCGAGAAGAGGAGCCGTTGGGGACTC
GGTGCCCCCTGCCCGGGACGACGGATCACGATGCATGAGGCTTGGCCGAG
GACTATCAGACACGATACACCATCAACTTTGGAGTAGTTGA
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Coding sequence (CDS) from alignment at CM002467.1:804106..804446-

>rna6189 ID=rna6189|Name=rna6189|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at CM002467.1:804106..804446- (Nannochloropsis gaditana)
TCGTTTTCTTTGGGAAAGATTTCGCCGGACGCGTGCGAGAAGAGGAGCCG
TTGGGGACTCGGTGCCCCCTGCCCGGGACGACGGATCACGATGCATGAGG
CTTGGCCGAGGACTATCAGACACGATACACCATCAACTTTGGAGTAGTTG
AATGATGCGGAGCTTCCTGAAGTCATGCTCGCGGTTGCTCGCTTTAACTA
CATCGATGTTACCAGGGCCTATGATTTATCGTTTTCTTTGGGAAAGATTT
CGCCGGACGCGTGCGAGAAGAGGAGCCGTTGGGGACTCGGTGCCCCCTGC
CCGGGACGACGGATCACGATGCATGAGGCTTGGCCGAGGACTATCAGACA
CGATACACCATCAACTTTGGAGTAGTTGAATGATGCGGAGCTTCCTGAAG
TCATGCTCGCGGTTGCTCGCTTTAACTACATCGATGTTACCAGGGCCTAT
GATTTA
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Synonyms
Publications