EWM24500.1, cds6174 (CDS) Nannochloropsis gaditana

Overview
NameEWM24500.1
Unique Namecds6174
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:804370..804446 -
Alignment locationCM002467.1:804106..804256 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24500.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101241g1.10483.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:804370..804446 -
CM002467.1supercontigCM002467.1:804106..804256 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM24500.1 vs. NCBI_GenBank
Match: gi|585105992|gb|EWM24500.1| (hypothetical protein Naga_101241g1 [Nannochloropsis gaditana])

HSP 1 Score: 152.14 bits (383), Expect = 8.691e-47
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MMRSFLKSCSRLLALTTSMLPGPMIYRFLWERFRRTRARRGAVGDSVPPARDDGSRCMRLGRGLSDTIHHQLWSS 75
            MMRSFLKSCSRLLALTTSMLPGPMIYRFLWERFRRTRARRGAVGDSVPPARDDGSRCMRLGRGLSDTIHHQLWSS
Sbjct:    1 MMRSFLKSCSRLLALTTSMLPGPMIYRFLWERFRRTRARRGAVGDSVPPARDDGSRCMRLGRGLSDTIHHQLWSS 75
The following BLAST results are available for this feature:
BLAST of EWM24500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105992|gb|EWM24500.1|8.691e-47100.00hypothetical protein Naga_101241g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6189rna6189Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications