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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100796g3.8937.mrna |
| Orig protein id | gnl|cribi|Naga_100796g3.8937 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:793256..795995 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6184 ID=rna6184|Name=rna6184|organism=Nannochloropsis gaditana|type=mRNA|length=991bp
CTCAAACGCTTGCGAAGCGTTCTTACCTGACCATTAATGTGCACTATTTT
TAGGAAAGACGTGGACAAACAAATAATTCACCAGGTACAAGGAGGCTCAA
GACTTTCGACGTTTTGTTCCGGGCACTTCCACCACCTCCCATCTCCTGAC
TACACAGTAGGCATGAATGGAATGCAATATCACCTTCCTCCCGGCTCTTA
CGCCCCCGTGCAAAGCTATTCGAGGGATCAGGAGCAGCAATCGAAGAGCT
TCGACGGGGCTGCGACAAGCAGAGCCATTCCTCAGCGGCTAATGAAGCGC
TACCGGATAGTGCAGACACTATGTGAAGCATTGAAGGCAGAGCCAGCTTG
TGTGAGTCTAACGCACGTGTTTCATTTGCTAAAGCACGCGAAATATCCAC
GATCACGCTCTCTGACCAATGCTATACTGATCACGGCCTGGGGGGACCTC
AACGATTTACTGTACGCATTCGGGGGCTTACTTCCCTACGAAATCTACGA
CAAAGTCTTGGAAATGTACGGCGAGGATGCGGCTTTGCTGATGATCAATT
GCGACAATTCCTGGCTGAGCGGATCCGCTTCCTACTTCCAAAATCCCGGC
CGTCGCGTCCCTCTCTTGGACAGCCTCCAGGCCTTGCGGGAAAGCGTAAC
GGCGGTGCGTGGCAAGGAGGGCTTTCCCGACCTCGCTGACCCTTGCCTCG
CCTTTTCCCAACGTGTGGTCTGCTTTTTGCTCTATGTTATCCTTCCGGGC
TGGTATGTCTTTACATTTGTTTTTTTTTTTCAAAATAAAGAGGCCCTTTT
TGGTTCTCGTCCCACGTCCACAGGAGACAGAGGGCGAGGCCTACAGCCTC
TGTCAGTTCCTCCTCTGGAAATCAGGACAACTCCCCGGGCGCGCCAAGGG
GGAGAACGGCTTTACAGATTTTCAGGACGTTGAGGTGTTAGGCCAATGGA
TGAGGATCTGCGTGAACGCGAGCCAGTCCACGGAGGGGGGG back to topprotein sequence of rna6184 >rna6184-protein ID=rna6184-protein|Name=rna6184|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MQHASKADFPANSEKIQWNERRRLAAARRLAASYSSSSLRPVSPKDNNAT
TLTAAWLRKHYKCASVPMWTEDTDEHEDTLRNVTHLSLTRSTDTPDITNL
ETLGELLPSLESFSLTHSCLSSLRDLGSRLGHLRVLDLTACNLQCLDGMA
AFPLLEEVYLSHNLLRDLTPLFLHDHLTILDISHNLYLRLPSSMAPLHVL
ASCKNMHTLSMKETPVERALQNLAIGSKIDSSYRKIVGSLIPQLHVLDGK
KLPKSEKDGEEQDIDEAAWRNVVLLLQKMEDEERDEEKTERWENRKADRV
SKRITD back to topmRNA from alignment at CM002467.1:793256..795995+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6184 ID=rna6184|Name=rna6184|organism=Nannochloropsis gaditana|type=mRNA|length=2740bp|location=Sequence derived from alignment at CM002467.1:793256..795995+ (Nannochloropsis gaditana)
CGTGTTTTCAGGGAATTTTTTTAATCATCTCTGTGATGAATTTTTTCCCA
TGATTATGATTTGAGACAACGATGCATGCGAAAATATTTGCATTACTTTC
TTTTTTCATACGTGTCTTTCCTTAGGTTGTTATCGAGAATTCTGAGCTAA
GCACGAGCTCACGTTCTCAAGCGTCTTGACATGTTTtatgcctctccctc
tgacCTTTCTGCGTGCAGGGAATAGTGTCATTGGATTTCAAACATAAAAT
CGAGGCAATTTAATGTTTTACAAGGCTGCTTGAGGAGCTGACATAGTGGA
CAGTACATTGCTGCGGTGATAGCTTTTCCTCAGCTTTTCTCGTGTTCTCG
ATCTCTGCCGGATCTCCGCTCATTTTTTCTTAAGCCCTTTATTGGAGAGC
ATCATCAAACTGTTGGATGCCGGGAAAAGGTCAATGCAACATGCTTCAAA
GGCCGACTTCCCAGCAAACAGTGAAAAGATTCAGTGGAATGAACGACGGC
GCCTGGCTGCCGCCCGGAGGTTAGCAGCTTCCTactcgtcttcctccttg
cggCCTGTGTCCCCCAAGGATAATAATGCAACAACACTCACAGCAGCCTG
GCTCCGAAAACATTACAAGTGTGCCTCTGTCCCCATGTGGACGGAGGACA
CTGACGAGCATGAGGATACCCTTCGAAATGTAACACACTTAAGCCTTACC
AGAAGCACAGACACCCCAGACATTACGAATCTTGAAACCCTTGGCGAGCT
TCTACCGTCTTTGGGTAAGAAAAATTGTATGGGCTCATTCCCCCTTGACG
TGACAAAACGATTATTTGAAATGGAATCCTCATTCTTTCTtcgtttcttc
cttttccttaaTCTGCCTCGTTCGCTTCAAGAATCCTTTTCTCTTACACA
CAgttgcctttcctctcttcgtGACTTGGGCTCCCGCCTTGGTCATCTTC
GTGTCCTTGATCTGACTGCTTGCAATCTACAATGCCTGGATGGCATGGCg
gcttttcctctcctggaGGAAGTCTATCTCTCACACAACCTTCTGCGCGA
CTTAACCCCACTGTTTCTCCACGACCATCTCACAATTCTTGATATCAGTC
ATAATTTGTACCTTCGTCTCCCTTCGTCTATGGCCCCACTGCATGTCTTG
GCTTCTTGTAAGAATATGCATACGTTATCGATGAAAGAGACTCCTGTGGA
AAGGGCGTTGCAAAATCTTGCGATAGGAAGTAAGATAGATAGCTCTTACC
GAAAAATTGTCGGGTCACTTATTCCGCAATTACATGTCTTGGATGGAAAA
AAGCTGCCAAAGAGCGAgaaagatggagaagaaCAAGATATTGATGAGGC
AGCTTGGCGCAATGTTGTGTTGCTCTTACAGAAaatggaagacgaggaga
gggatgaagagAAGACAGAAAGATGGGAAAATAGAAAAGCTGATAGAGTT
TCAAAACGCATTACTGACTGATGACAGATGaccgggaaggaaagcaacaA
AACGAGAGGAAAGTGCATATTGACACGTAGGAAAGCGGAGGTCTCAGATG
CGGAAGCTAGAAGCAATAGGGTACTTCGAAAATACAGAGCGATCCGCCTA
CTTATGTTGAGACATTAATTTTTCGGTCTGCGTAAGCGTACATCAACATT
TCTTGATTTGTCATCTTTTAAGCTCCTCATTGTTCTTAATTGTGAAAGCC
TTCCTTTCTACATATTTCCGAGGCATGATGGTATCTGAAGCTGTACGCGT
ATGTAAAGCAAGCAGCTCAAGGTTACGCTCTTTTATTTATTTCATTCATG
TTTCACTTGAAGAAGTACAAGTACCTTTCCAGATTGCGTGAGTGCGGGGT
AAGCTCCCGTACTGCAGTAAAGGTTTTTGGCAAGCCAATAGACTATATCG
CATCGTATTTGTCGCCTCAGCTGCTGCCTGGTAACGGCCAAGATTTAAAT
TTTGTCCTTGTCCACCACTGACCTCAAGCACACTTGTTTGGGATGTTAAA
ATGCGCATTATCATTCACACTTTCTTCTGGTCAATTTGAAGCATaccctt
tccttttcgcTGTCACGGGATTAGCCCATTAGTCTCATAGGGGAGGTTGC
AAGAAGCACACAATAACTGATTCTCTGCTCTTCAACACTTCAGATGCGGT
ATGTATAAAGCGTGTCTTTGCTCATGAAGGCACTATGGCGGACGCAGATG
CTGTCGATTCGGCCACTTTCAGCGGCTGGGAGGCGGTCAAGACTAGAGTG
GTCGCCACTTTCCTTCTCGATATCCTCTACAGCCTCAGCCGAGGGGGACG
GTAAAGAAAGTATTTGCCCCGAATGCGGAGCTTCCTTCAAGTGTGGCTGC
ACTAAGGGGGACTGTACAGCATGTTGGTGCGCGTCCTTGCCCTTggcact
tcctctccctccagtccGTTCTCCTAACTCATCCCACGCCCCGGCAGACG
AGCCTGTGTCTGGTTGTTTGTGTCCATGTTGTCTACGCGCTAAAATTGCG
GACAGGAATGCGTGTAATTTGAAAAAGGCGGATCCTTAAGGGCAAATAAG
GTGGATTGTGGAATTTGATAGCATGTCTTTCGGCATGCTCCCACACTTTG
CCTCCATGACAACGATTAGCCCGGGCCCGCAAAAACAAATGGAAAGTGAA
AGCCACAGAATGCTCGGAAGCGCACTTGCAATCTCCGCCATTCATCTCGC
CCTGCATCATTTCTTGTATCTCGGAGAAAGAATGCTTTCA back to topCoding sequence (CDS) from alignment at CM002467.1:793256..795995+ >rna6184 ID=rna6184|Name=rna6184|organism=Nannochloropsis gaditana|type=CDS|length=1842bp|location=Sequence derived from alignment at CM002467.1:793256..795995+ (Nannochloropsis gaditana)
ATGCAACATGCTTCAAAGGCCGACTTCCCAGCAAACAGTGAAAAGATTCA
GTGGAATGAACGACGGCGCCTGGCTGCCGCCCGGAGGTTAGCAGCTTCCT
actcgtcttcctccttgcggCCTGTGTCCCCCAAGGATAATAATGCAACA
ACACTCACAGCAGCCTGGCTCCGAAAACATTACAAGTGTGCCTCTGTCCC
CATGTGGACGGAGGACACTGACGAGCATGAGGATACCCTTCGAAATGTAA
CACACTTAAGCCTTACCAGAAGCACAGACACCCCAGACATTACGAATCTT
GAAACCCTTGGCGAGCTTCTACCGTCTTTGGAATCCTTTTCTCTTACACA
CAgttgcctttcctctcttcgtGACTTGGGCTCCCGCCTTGGTCATCTTC
GTGTCCTTGATCTGACTGCTTGCAATCTACAATGCCTGGATGGCATGGCg
gcttttcctctcctggaGGAAGTCTATCTCTCACACAACCTTCTGCGCGA
CTTAACCCCACTGTTTCTCCACGACCATCTCACAATTCTTGATATCAGTC
ATAATTTGTACCTTCGTCTCCCTTCGTCTATGGCCCCACTGCATGTCTTG
GCTTCTTGTAAGAATATGCATACGTTATCGATGAAAGAGACTCCTGTGGA
AAGGGCGTTGCAAAATCTTGCGATAGGAAGTAAGATAGATAGCTCTTACC
GAAAAATTGTCGGGTCACTTATTCCGCAATTACATGTCTTGGATGGAAAA
AAGCTGCCAAAGAGCGAgaaagatggagaagaaCAAGATATTGATGAGGC
AGCTTGGCGCAATGTTGTGTTGCTCTTACAGAAaatggaagacgaggaga
gggatgaagagAAGACAGAAAGATGGGAAAATAGAAAAGCTGATAGAGTT
TCAAAACGCATTACTGACTGAATGCAACATGCTTCAAAGGCCGACTTCCC
AGCAAACAGTGAAAAGATTCAGTGGAATGAACGACGGCGCCTGGCTGCCG
CCCGGAGGTTAGCAGCTTCCTactcgtcttcctccttgcggCCTGTGTCC
CCCAAGGATAATAATGCAACAACACTCACAGCAGCCTGGCTCCGAAAACA
TTACAAGTGTGCCTCTGTCCCCATGTGGACGGAGGACACTGACGAGCATG
AGGATACCCTTCGAAATGTAACACACTTAAGCCTTACCAGAAGCACAGAC
ACCCCAGACATTACGAATCTTGAAACCCTTGGCGAGCTTCTACCGTCTTT
GGAATCCTTTTCTCTTACACACAgttgcctttcctctcttcgtGACTTGG
GCTCCCGCCTTGGTCATCTTCGTGTCCTTGATCTGACTGCTTGCAATCTA
CAATGCCTGGATGGCATGGCggcttttcctctcctggaGGAAGTCTATCT
CTCACACAACCTTCTGCGCGACTTAACCCCACTGTTTCTCCACGACCATC
TCACAATTCTTGATATCAGTCATAATTTGTACCTTCGTCTCCCTTCGTCT
ATGGCCCCACTGCATGTCTTGGCTTCTTGTAAGAATATGCATACGTTATC
GATGAAAGAGACTCCTGTGGAAAGGGCGTTGCAAAATCTTGCGATAGGAA
GTAAGATAGATAGCTCTTACCGAAAAATTGTCGGGTCACTTATTCCGCAA
TTACATGTCTTGGATGGAAAAAAGCTGCCAAAGAGCGAgaaagatggaga
agaaCAAGATATTGATGAGGCAGCTTGGCGCAATGTTGTGTTGCTCTTAC
AGAAaatggaagacgaggagagggatgaagagAAGACAGAAAGATGGGAA
AATAGAAAAGCTGATAGAGTTTCAAAACGCATTACTGACTGA back to top
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