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Properties
| Property Name | Value |
|---|
| Product | isoform b |
| Orig transcript id | gnl|cribi|Naga_100560g3.2585.mrna |
| Orig protein id | gnl|cribi|Naga_100560g3.2585 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:778402..779919 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6177 ID=rna6177|Name=rna6177|organism=Nannochloropsis gaditana|type=mRNA|length=633bp
ATGGCATTATGTAGCGTGTGCATGGCAAGACCTCACCGCGTGCGGCATGC
CCCCCCTCCTACAGAGGACGTGATGAATGCGGCCGCCATGCCGGGAGGGA
AAGTTGTCATATTCACCGGGCTCAAGAAATGCGTGCACACAGAGGAGGAA
CTGGCGGCGGTTATCGGACACGAAATCTCCCACGTGCTCCTCCGTCATTC
TGCCGAACAGATGGGCTCCACCGCCTTGATGAATTATTTCTTCTTCCTTC
TCGCACTCCTGGGCCTTCCTGTGAACGAATTGACGCTCTTGCTGGGCGAC
TTAACATGGCAGCGGCCCAACAGCCGTTTGCACGAGAAGGAAGCCGACGC
CGTTGGGGTATTGTTGTGCGCCAAAGCCGGGTATAATCCCGCGGCGGCCG
TGCGCGTTTTTGAGCGGATGGCCGGCGAGGAGTTGAAACGGAGCAAAGGC
GTGACGGTTCCAGGGTTCTTGAGCACGCACCCTGCCTTCCCTGAACGGAT
TGCCTTGTTGAAGCGGGAAGTCGAGAAGGTCCGTCCCCTGTACGAGGCGA
GCAAGGAGGCTGCTTTCTTCTCCTTCACGTAGGAGGCTTTAATTTAAATT
TCTTCAGAAGGGAGGGGAGTAGTGTGGGGGAAG back to topprotein sequence of rna6177 >rna6177-protein ID=rna6177-protein|Name=rna6177|organism=Nannochloropsis gaditana|type=polypeptide|length=505bp
MASGRWRVPGGRNLAKIPNVLYRASTKTNALPRKIAVTRMLAFCSCLAAL
GWVWSSLQLNKNYRLDRIPLSSAALRDLLSMEMQASYNLVVPHDSTSPFS
LPIILSSSSHSPTTTTSSSSSSSSSSSSSSSSSSSSTPPLSREECSLRYG
ARRFLDPNPNFTPAVLYSYPGSGNTFTRLLIDHATGVYTGAILGVNDPRL
AEALPGQSHCDSSVIAIKAHPKQFRPLKLLAGQLPDNCQAEGGLRQGFER
FILLSRDPYAAIWSEYQRRLNNGSHHQAADPAAFDPEHFGRVAMVFAQEY
VTTLENFEFLKTKLPRHDILSVKYEDLTTTDVLTREAVLHDIVTFLGATK
EAKDSRRCSCAFTLADRPDTRRTREEDKEVRKAVTREEAYTPELACDMWE
LLEEGGAGRLGYSPPPGVTCVERKEEGEGEEMAVRKESWERGRRKAKEGG
ARAGEKEGRRRRREDAEEEGKEGKGPIGGREGGREGDEGGEGKEGRIRIR
VSRMQ back to topmRNA from alignment at CM002467.1:778402..779919- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6177 ID=rna6177|Name=rna6177|organism=Nannochloropsis gaditana|type=mRNA|length=1518bp|location=Sequence derived from alignment at CM002467.1:778402..779919- (Nannochloropsis gaditana)
ATGGCCTCTGGACGGTGGCGAGTGCCTGGTGGGAGAAATTTGGCGAAGAT
CCCCAATGTCCTTTACCGCGCCTCCACGAAAACAAATGCTTTGCCCCGCA
AAATTGCCGTCACGAGAATGCTGGCGTTTTGCTCCTGCTTGGCTGCGTTG
GGATGGGTATGGTCCAGTCTGCAGCTGAACAAAAATTATAGATTGGATCG
GATCCCTCTCTCCTCGGCGGCGCTGCGAGACCTGCTGTCCATGGAGATGC
AGGCGTCGTATAATCTTGTCGTTCCCCACGATTCAACCTCCCCGTTTTCT
CTACCGATCATTCTCTCCTCCTCGTCCCATTCTCCCACCACCACCACCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCACCCCTCCCTTGTCTCGAGAGGAATGCTCTCTCAGATACGGG
GCCCGCCGCTTTTTGGATCCCAACCCAAACTTTACCCCTGCCGTCCTTTA
CAGTTACCCTGGGAGCGGCAATACCTTCACAAGGCTCTTGATTGACCATG
CGACAGGTGTCTATACCGGAGCCATCTTAGGAGTCAACGACCCACGCTTG
GCAGAAGCCTTGCCTGGCCAATCCCATTGTGACTCGAGCGTCATCGCCAT
CAAGGCACACCCCAAGCAGTTCCGTCCATTGAAACTCTTGGCCGGGCAGT
TACCCGACAACTGCCAGGCGGAAGGCGGGCTTCGACAGGGGTTCGAGCGC
TTTATATTGCTGAGCCGAGACCCGTACGCGGCGATTTGGAGCGAGTACCA
GCGACGGTTGAATAACGGCAGTCACCACCAGGCTGCGGACCCGGCGGCCT
TTGATCCTGAGCATTTTGGTCGTGTGGCCATGGTCTTTGCCCAGGAATAC
GTTACCACCCTCGAAAATTTTGAATTTTTGAAAACAAAATTACCGCGCCA
CGACATACTCTCGGTCAAATACGAGGATCTGACCACCACGGATGTGCTGA
CGCGGGAGGCGGTCCTGCATGACATCGTCACCTTCTTGGGGGCGACTAAA
GAGGCAAAAGATAGCCGGAGGTGCTCCTGTGCCTTCACCTTAGCAGACCG
GCCCGACACCCGAAGGACAAGGGAGGAAGACAAGGAGGTAAGGAAGGCTG
TTACGAGGGAAGAGGCGTATACACCGGAGCTGGCGTGTGATATGTGGGAG
CTGCTGGAGGAGGGAGGGGCGGGGAGGCTGGGCTACAGTCCCCCCCCGGG
GGTCACCTGCGTGGAACGGAAGGAGGAGGGGGAGGGGGAAGAAATGGCTG
TGAGGAAGGAAAGTTGGGAGAGAGGAAGGAGGAAGGCAAAAGAAGGAGGG
GCACGGGCAGGGGAGAAGGAAGGCAGAAGGAGACGGAGGGAAGACGCGGA
GGAGGAAGGGAAGGAGGGAAAAGGGCCGATAGGAGGGAGGGAAGGAGGGC
GGGAGGGGGACGAGGGAGGCGAGGGGAAAGAGGGGCGCATAAGAATCCGG
GTGTCCCGAATGCAATAG back to topCoding sequence (CDS) from alignment at CM002467.1:778402..779919- >rna6177 ID=rna6177|Name=rna6177|organism=Nannochloropsis gaditana|type=CDS|length=1518bp|location=Sequence derived from alignment at CM002467.1:778402..779919- (Nannochloropsis gaditana)
ATGGCCTCTGGACGGTGGCGAGTGCCTGGTGGGAGAAATTTGGCGAAGAT
CCCCAATGTCCTTTACCGCGCCTCCACGAAAACAAATGCTTTGCCCCGCA
AAATTGCCGTCACGAGAATGCTGGCGTTTTGCTCCTGCTTGGCTGCGTTG
GGATGGGTATGGTCCAGTCTGCAGCTGAACAAAAATTATAGATTGGATCG
GATCCCTCTCTCCTCGGCGGCGCTGCGAGACCTGCTGTCCATGGAGATGC
AGGCGTCGTATAATCTTGTCGTTCCCCACGATTCAACCTCCCCGTTTTCT
CTACCGATCATTCTCTCCTCCTCGTCCCATTCTCCCACCACCACCACCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCACCCCTCCCTTGTCTCGAGAGGAATGCTCTCTCAGATACGGG
GCCCGCCGCTTTTTGGATCCCAACCCAAACTTTACCCCTGCCGTCCTTTA
CAGTTACCCTGGGAGCGGCAATACCTTCACAAGGCTCTTGATTGACCATG
CGACAGGTGTCTATACCGGAGCCATCTTAGGAGTCAACGACCCACGCTTG
GCAGAAGCCTTGCCTGGCCAATCCCATTGTGACTCGAGCGTCATCGCCAT
CAAGGCACACCCCAAGCAGTTCCGTCCATTGAAACTCTTGGCCGGGCAGT
TACCCGACAACTGCCAGGCGGAAGGCGGGCTTCGACAGGGGTTCGAGCGC
TTTATATTGCTGAGCCGAGACCCGTACGCGGCGATTTGGAGCGAGTACCA
GCGACGGTTGAATAACGGCAGTCACCACCAGGCTGCGGACCCGGCGGCCT
TTGATCCTGAGCATTTTGGTCGTGTGGCCATGGTCTTTGCCCAGGAATAC
GTTACCACCCTCGAAAATTTTGAATTTTTGAAAACAAAATTACCGCGCCA
CGACATACTCTCGGTCAAATACGAGGATCTGACCACCACGGATGTGCTGA
CGCGGGAGGCGGTCCTGCATGACATCGTCACCTTCTTGGGGGCGACTAAA
GAGGCAAAAGATAGCCGGAGGTGCTCCTGTGCCTTCACCTTAGCAGACCG
GCCCGACACCCGAAGGACAAGGGAGGAAGACAAGGAGGTAAGGAAGGCTG
TTACGAGGGAAGAGGCGTATACACCGGAGCTGGCGTGTGATATGTGGGAG
CTGCTGGAGGAGGGAGGGGCGGGGAGGCTGGGCTACAGTCCCCCCCCGGG
GGTCACCTGCGTGGAACGGAAGGAGGAGGGGGAGGGGGAAGAAATGGCTG
TGAGGAAGGAAAGTTGGGAGAGAGGAAGGAGGAAGGCAAAAGAAGGAGGG
GCACGGGCAGGGGAGAAGGAAGGCAGAAGGAGACGGAGGGAAGACGCGGA
GGAGGAAGGGAAGGAGGGAAAAGGGCCGATAGGAGGGAGGGAAGGAGGGC
GGGAGGGGGACGAGGGAGGCGAGGGGAAAGAGGGGCGCATAAGAATCCGG
GTGTCCCGAATGCAATAG back to top
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