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Properties
| Property Name | Value |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
| Orig transcript id | gnl|cribi|Naga_100678g2.3068.mrna |
| Orig protein id | gnl|cribi|Naga_100678g2.3068 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:769958..772432 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6173 ID=rna6173|Name=rna6173|organism=Nannochloropsis gaditana|type=mRNA|length=1799bp
GCGACTTATGTATTCCGCTGCTTTCACATCATTGCCTTTGCAAGATCAGG
AGCCATTTGCTTTTCTAGATTCTACATGTCACCAGTAGAAAAGAAGGCCG
ACAACAAAAAGAGATGCCTTTTCATGCATCATTCCTGTGATACGTACTTA
GCGTAAGCGAGGACAAATAAGCATGATGAGCTGTCTCACCCTCTTACCAG
GCAAAGCTCAAGCGTCTCTGTCGTTACCTTTTCCTATCCCTCCTTCCATG
ACAGAGCAGACGACCAGCATCACAAAGAACTTCGTTCTAGGAAACCCATA
AAGCTCGTTCTCAGATAAAATGGCACGAAACTACAGCCTTGGTGTTCTTC
TTGCCGTTGCGGCCCTTGCTTCCCCTTTCACTCAAGCGCACTCTACCTTA
CGGATTGACGAGGGGGTGAAACAGACCGTCACCTCTCCTATAGATGCACT
TTCTGCGACGATGCCCAACCCTGTTCACACCTGGGAGGACAAAAAAACCG
GGACGTATTACGCTCAAAACCAGATTTTTCTAAAAAACACGGATGCGACG
CGGGCGGTGTGCGACGTGAAATTTACGGTGCCGGTCGATGCGGCGGCCAA
GACCCGGGTGGAGAGCTCCTATGTCTCGCACGTGGAAACGAGTCGAAGCG
GGCTGGATGGGTCCCTGCCCGAGTATGCGGACAAGATTTTCCCCAACGAA
ACCGTCAATCTCGGCTACCTTATATCGGGGCCCGAGGCGAAGGCAGTGGA
AATGGGAGACTTCAAAGTGACGAGCGCTGAATGGTGCGACTGAAGGGTGG
CAGACAAAGGGGGAAGGGGGGAAGCTGGATATAATTTTTAAAATTGGACA
AGGACGGGCATTGATCAAGAGGTTATGTGCAAAATGAATGTTTAATATGG
TAGAAGACCTGCCGCGGATGGGGGGTTGGAGAGGGGGCAAGAGGGGGTGC
TGCGACGAGAAGGGACGATTCACGCTGGGCCTAGGGAGAGGGAGGGAGCA
TAGGCCGAAGAACAAAAGGAAGCGAGTCGATGAGTAAGGTGTATGTATCT
GTTTTGAGGACAAGAGAAGAAGCCAAGGGTGAAGGGAGGATGGAGCTCTG
TGCGTTGTGTGTGCGTGGTGTGTACTAAGGCTAGGCAGGTCTTCAGGCGT
GACAGCAACATGGGCTCGGGCATTGTGACACGCGCGAATGTTCATTGAAT
GCAGTGCTTGGGATGGAGGACGAATAGCGGTCGGACTCAGAAGTCGCTCC
AGCCACGCTTGAGTGCCACGCCCGGGGCGGGGGGGAAAGATAAAATCATC
AACAAAAACCCTCCCTACCCCAAAAAAGTGAGTTGATGAACACGGTCCAT
GCGACATTGGACGCACTCCATCCATATTTTTTTCCCCTTTTCCCTCTCGT
CTCCTGAGTCCTCAGCCTCCTCGCGCGTCTCCTCACAATGCAAAGGTCGC
CAGGACAGGGTAGTGATCGCTGAGGGTATTGTCGGCAAACACCTGGTAGT
TGTAGGGCAAAGGCGAGACAAAGTGGTCGAGGATGTGCTGCTCCTGCGGG
CATGTGACCTGTAGGGAGACAATTGGCAGGAGGAAGGAGCAATGGCAGGT
TAAAGAGAGGGACGGCGGGGTGGAGGGGGAGCGGGGGCGAGAAAAATATC
AACCTCATCTCGGATGGAACGGCAAAGAGCTCCCTCCCCATTCTTCCCAC
GCCTCCTTCGTGGCCCCCCCTGCTCTTTTTGATCACTTACTTGGTCGACC
AGGCTGCCCACGCCCAAGACCCGCGGTCTATGCACGTTGAAGTCGCCGA back to topprotein sequence of rna6173 >rna6173-protein ID=rna6173-protein|Name=rna6173|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MKLSDGAETKGESSTQTDGGRRKQTFRVLTYNVWIAPLVRWNPIENLEAI
CKFIESLDVDIVCLQEAFDWRLGPMGFLCETLWGGGASFGPLSWFFYVEG
LLFPVSQTCHQKRIIEALLPSLPHHLPSAPIPFGRGHNQGLLVLSKHPLH
RPLRQYLTCTPVHHMGFQAFTVAPLPREGRGKGGEAGAREDIRFVNLHLV
PNFHTHPWKGRVLGWLGERDVPRMQAKQLAEIGEEVGREGGKEGGTGGRA
WCVVGDFNVHRPRVLGVGSLVDQVTCPQEQHILDHFVSPLPYNYQVFADN
TLSDHYPVLATFAL back to topmRNA from alignment at CM002467.1:769958..772432- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6173 ID=rna6173|Name=rna6173|organism=Nannochloropsis gaditana|type=mRNA|length=2475bp|location=Sequence derived from alignment at CM002467.1:769958..772432- (Nannochloropsis gaditana)
AAGGGTTACGACTCCCCGTTTAGGGCCAATGCTCGGGGGCACGCCTTTGA
TTCGTGACCTTTTTTGGGAGAAATTGGTACATGGTTACAACAAGTACAAG
TCATGGTATACCTTCGGATTCCATACCTTCCTTGGCGCCTCCCCTTCTAC
ACACAGAGCATCCGACGATGAGAGGATAAGGGAAGCGCATTTAAGAAGTC
ACTCTGCATCGATCAGCGTGTGTGAATGACATCATGAAACTATCCGACGG
TGCGGAAACGAAAGGCGAAAGCTCAACGCAGACTGACGGTGGCAGGCGAA
AGCAGACTTTCAGAGTGCGTGTAGGCGGGGGGGGCGGGGGTTGGTCAGAG
GGGAAACGGGGGTCAATGGGCCGCACCATCCAGCCGTTCTAACGCACGTG
AGGCTTGAATCTGAGCTTCTATGACGCTGAGGAAAGAATGTTGTGAGGAT
AATGAGGGGTTTAAGCAAGATATGAGTCGTCCCTTTCACGAAGTATTTTC
TCTCCAGGTCTTAACCTACAATGTCTGGATTGCACCACTTGTAAGGTGGA
ATCCGATCGAGAATTTAGAGGCAATATGTAAATTCATCGAAAGCTTGGAC
GTCGACATTGTCTGTCTGCAAGAGGTCAGCTTATTTAAAGAGGGGCCCCG
GGTGCGAGGTGTCTGATTAAAAAATTAAAGGCTTCGTTTCTGGGGGCGGG
ACCCGAGTGATGAATCCGGAAGTGAGAGGGCGTCTCTGTTTGAGCTCCTA
ACCAACCGGGAATGAGGGTACGACAAAAAGGAAAATAGCGTACAATGATG
CTCGCGGAATCGATCGGCATGGTCCTTTCTCTCCCTCCTTCACGTCCTCC
TTCCCTGCCTTCCTTCCTCCCTCAGGCGTTCGACTGGCGCCTGGGACCGA
TGGGTTTTTTGTGCGAGACCCTCTGGGGGGGGGGGGCATCATTCGGCCCT
CTTTCCTGGTTTTTCTACGTCGAAGGTCTTCTCTTCCCAGTTTCGCAAAC
ATGTCACCAAAAACGCATCATCGAGGCCCTCCTCCCCTCCCTCCCTCACC
ACCTGCCCTCCGCCCCCATCCCCTTCGGCCGGGGCCACAATCAAGGCCTG
CTCGTCCTTTCCAAGCACCCCCTCCACCGGCCCCTGCGCCAATACCTGAC
CTGCACGCCTGTGCACCACATGGGCTTCCAGGCGTTCACGGTCGCACCTT
TGCCCCGGGAGGGAAGGGGAAAGGGCGGGGAGGCGGGGGCGAGGGAGGAC
ATCCGCTTCGTCAACCTCCACTTGGTACCGAATTTCCATACCCATCCGTG
GAAAGGCAGGGTCTTAGGGTGGCTCGGGGAGAGGGATGTGCCACGCATGC
AGGCAAAGCAGCTGGCGGAGATCGGGGAGGAGGTGGGGAGGGAGGGAGGG
AAGGAGGGCGGGACGGGGGGAAGGGCATGGTGCGTTGTCGGCGACTTCAA
CGTGCATAGACCGCGGGTCTTGGGCGTGGGCAGCCTGGTCGACCAAGTAA
GTGATCAAAAAGAGCAGGGGGGGCCACGAAGGAGGCGTGGGAAGAATGGG
GAGGGAGCTCTTTGCCGTTCCATCCGAGATGAGGTTGATATTTTTCTCGC
CCCCGCTCCCCCTCCACCCCGCCGTCCCTCTCTTTAACCTGCCATTGCTC
CTTCCTCCTGCCAATTGTCTCCCTACAGGTCACATGCCCGCAGGAGCAGC
ACATCCTCGACCACTTTGTCTCGCCTTTGCCCTACAACTACCAGGTGTTT
GCCGACAATACCCTCAGCGATCACTACCCTGTCCTGGCGACCTTTGCATT
GTGAGGAGACGCGCGAGGAGGCTGAGGACTCAGGAGACGAGAGGGAAAAG
GGGAAAAAAATATGGATGGAGTGCGTCCAATGTCGCATGGACCGTGTTCA
TCAACTCACTTTTTTGGGGTAGGGAGGGTTTTTGTTGATGATTTTATCTT
TCCCCCCCGCCCCGGGCGTGGCACTCAAGCGTGGCTGGAGCGACTTCTGA
GTCCGACCGCTATTCGTCCTCCATCCCAAGCACTGCATTCAATGAACATT
CGCGCGTGTCACAATGCCCGAGCCCATGTTGCTGTCACGCCTGAAGACCT
GCCTAGCCTTAGTACACACCACGCACACACAACGCACAGAGCTCCATCCT
CCCTTCACCCTTGGCTTCTTCTCTTGTCCTCAAAACAGATACATACACCT
TACTCATCGACTCGCTTCCTTTTGTTCTTCGGCCTATGCTCCCTCCCTCT
CCCTAGGCCCAGCGTGAATCGTCCCTTCTCGTCGCAGCACCCCCTCTTGC
CCCCTCTCCAACCCCCCATCCGCGGCAGGTCTTCTACCATATTAAACATT
CATTTTGCACATAACCTCTTGATCAATGCCCGTCCTTGTCCAATTTTAAA
AATTATATCCAGCTTCCCCCCTTCCCCCTTTGTCTGCCACCCTTCAGTCG
CACCATTCAGCGCTCGTCACTTTGA back to topCoding sequence (CDS) from alignment at CM002467.1:769958..772432- >rna6173 ID=rna6173|Name=rna6173|organism=Nannochloropsis gaditana|type=CDS|length=3780bp|location=Sequence derived from alignment at CM002467.1:769958..772432- (Nannochloropsis gaditana)
GTCACATGCCCGCAGGAGCAGCACATCCTCGACCACTTTGTCTCGCCTTT
GCCCTACAACTACCAGGTGTTTGCCGACAATACCCTCAGCGATCACTACC
CTGTCCTGGCGACCTTTGCATTGTGAGCGTTCGACTGGCGCCTGGGACCG
ATGGGTTTTTTGTGCGAGACCCTCTGGGGGGGGGGGGCATCATTCGGCCC
TCTTTCCTGGTTTTTCTACGTCGAAGGTCTTCTCTTCCCAGTTTCGCAAA
CATGTCACCAAAAACGCATCATCGAGGCCCTCCTCCCCTCCCTCCCTCAC
CACCTGCCCTCCGCCCCCATCCCCTTCGGCCGGGGCCACAATCAAGGCCT
GCTCGTCCTTTCCAAGCACCCCCTCCACCGGCCCCTGCGCCAATACCTGA
CCTGCACGCCTGTGCACCACATGGGCTTCCAGGCGTTCACGGTCGCACCT
TTGCCCCGGGAGGGAAGGGGAAAGGGCGGGGAGGCGGGGGCGAGGGAGGA
CATCCGCTTCGTCAACCTCCACTTGGTACCGAATTTCCATACCCATCCGT
GGAAAGGCAGGGTCTTAGGGTGGCTCGGGGAGAGGGATGTGCCACGCATG
CAGGCAAAGCAGCTGGCGGAGATCGGGGAGGAGGTGGGGAGGGAGGGAGG
GAAGGAGGGCGGGACGGGGGGAAGGGCATGGTGCGTTGTCGGCGACTTCA
ACGTGCATAGACCGCGGGTCTTGGGCGTGGGCAGCCTGGTCGACCAAGTC
TTAACCTACAATGTCTGGATTGCACCACTTGTAAGGTGGAATCCGATCGA
GAATTTAGAGGCAATATGTAAATTCATCGAAAGCTTGGACGTCGACATTG
TCTGTCTGCAAGAGATGAAACTATCCGACGGTGCGGAAACGAAAGGCGAA
AGCTCAACGCAGACTGACGGTGGCAGGCGAAAGCAGACTTTCAGAGTCAC
ATGCCCGCAGGAGCAGCACATCCTCGACCACTTTGTCTCGCCTTTGCCCT
ACAACTACCAGGTGTTTGCCGACAATACCCTCAGCGATCACTACCCTGTC
CTGGCGACCTTTGCATTGTGAGCGTTCGACTGGCGCCTGGGACCGATGGG
TTTTTTGTGCGAGACCCTCTGGGGGGGGGGGGCATCATTCGGCCCTCTTT
CCTGGTTTTTCTACGTCGAAGGTCTTCTCTTCCCAGTTTCGCAAACATGT
CACCAAAAACGCATCATCGAGGCCCTCCTCCCCTCCCTCCCTCACCACCT
GCCCTCCGCCCCCATCCCCTTCGGCCGGGGCCACAATCAAGGCCTGCTCG
TCCTTTCCAAGCACCCCCTCCACCGGCCCCTGCGCCAATACCTGACCTGC
ACGCCTGTGCACCACATGGGCTTCCAGGCGTTCACGGTCGCACCTTTGCC
CCGGGAGGGAAGGGGAAAGGGCGGGGAGGCGGGGGCGAGGGAGGACATCC
GCTTCGTCAACCTCCACTTGGTACCGAATTTCCATACCCATCCGTGGAAA
GGCAGGGTCTTAGGGTGGCTCGGGGAGAGGGATGTGCCACGCATGCAGGC
AAAGCAGCTGGCGGAGATCGGGGAGGAGGTGGGGAGGGAGGGAGGGAAGG
AGGGCGGGACGGGGGGAAGGGCATGGTGCGTTGTCGGCGACTTCAACGTG
CATAGACCGCGGGTCTTGGGCGTGGGCAGCCTGGTCGACCAAGTCTTAAC
CTACAATGTCTGGATTGCACCACTTGTAAGGTGGAATCCGATCGAGAATT
TAGAGGCAATATGTAAATTCATCGAAAGCTTGGACGTCGACATTGTCTGT
CTGCAAGAGATGAAACTATCCGACGGTGCGGAAACGAAAGGCGAAAGCTC
AACGCAGACTGACGGTGGCAGGCGAAAGCAGACTTTCAGAGTCACATGCC
CGCAGGAGCAGCACATCCTCGACCACTTTGTCTCGCCTTTGCCCTACAAC
TACCAGGTGTTTGCCGACAATACCCTCAGCGATCACTACCCTGTCCTGGC
GACCTTTGCATTGTGAGCGTTCGACTGGCGCCTGGGACCGATGGGTTTTT
TGTGCGAGACCCTCTGGGGGGGGGGGGCATCATTCGGCCCTCTTTCCTGG
TTTTTCTACGTCGAAGGTCTTCTCTTCCCAGTTTCGCAAACATGTCACCA
AAAACGCATCATCGAGGCCCTCCTCCCCTCCCTCCCTCACCACCTGCCCT
CCGCCCCCATCCCCTTCGGCCGGGGCCACAATCAAGGCCTGCTCGTCCTT
TCCAAGCACCCCCTCCACCGGCCCCTGCGCCAATACCTGACCTGCACGCC
TGTGCACCACATGGGCTTCCAGGCGTTCACGGTCGCACCTTTGCCCCGGG
AGGGAAGGGGAAAGGGCGGGGAGGCGGGGGCGAGGGAGGACATCCGCTTC
GTCAACCTCCACTTGGTACCGAATTTCCATACCCATCCGTGGAAAGGCAG
GGTCTTAGGGTGGCTCGGGGAGAGGGATGTGCCACGCATGCAGGCAAAGC
AGCTGGCGGAGATCGGGGAGGAGGTGGGGAGGGAGGGAGGGAAGGAGGGC
GGGACGGGGGGAAGGGCATGGTGCGTTGTCGGCGACTTCAACGTGCATAG
ACCGCGGGTCTTGGGCGTGGGCAGCCTGGTCGACCAAGTCTTAACCTACA
ATGTCTGGATTGCACCACTTGTAAGGTGGAATCCGATCGAGAATTTAGAG
GCAATATGTAAATTCATCGAAAGCTTGGACGTCGACATTGTCTGTCTGCA
AGAGATGAAACTATCCGACGGTGCGGAAACGAAAGGCGAAAGCTCAACGC
AGACTGACGGTGGCAGGCGAAAGCAGACTTTCAGAGTCACATGCCCGCAG
GAGCAGCACATCCTCGACCACTTTGTCTCGCCTTTGCCCTACAACTACCA
GGTGTTTGCCGACAATACCCTCAGCGATCACTACCCTGTCCTGGCGACCT
TTGCATTGTGAGCGTTCGACTGGCGCCTGGGACCGATGGGTTTTTTGTGC
GAGACCCTCTGGGGGGGGGGGGCATCATTCGGCCCTCTTTCCTGGTTTTT
CTACGTCGAAGGTCTTCTCTTCCCAGTTTCGCAAACATGTCACCAAAAAC
GCATCATCGAGGCCCTCCTCCCCTCCCTCCCTCACCACCTGCCCTCCGCC
CCCATCCCCTTCGGCCGGGGCCACAATCAAGGCCTGCTCGTCCTTTCCAA
GCACCCCCTCCACCGGCCCCTGCGCCAATACCTGACCTGCACGCCTGTGC
ACCACATGGGCTTCCAGGCGTTCACGGTCGCACCTTTGCCCCGGGAGGGA
AGGGGAAAGGGCGGGGAGGCGGGGGCGAGGGAGGACATCCGCTTCGTCAA
CCTCCACTTGGTACCGAATTTCCATACCCATCCGTGGAAAGGCAGGGTCT
TAGGGTGGCTCGGGGAGAGGGATGTGCCACGCATGCAGGCAAAGCAGCTG
GCGGAGATCGGGGAGGAGGTGGGGAGGGAGGGAGGGAAGGAGGGCGGGAC
GGGGGGAAGGGCATGGTGCGTTGTCGGCGACTTCAACGTGCATAGACCGC
GGGTCTTGGGCGTGGGCAGCCTGGTCGACCAAGTCTTAACCTACAATGTC
TGGATTGCACCACTTGTAAGGTGGAATCCGATCGAGAATTTAGAGGCAAT
ATGTAAATTCATCGAAAGCTTGGACGTCGACATTGTCTGTCTGCAAGAGA
TGAAACTATCCGACGGTGCGGAAACGAAAGGCGAAAGCTCAACGCAGACT
GACGGTGGCAGGCGAAAGCAGACTTTCAGA back to top
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