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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-like protein |
| Orig transcript id | gnl|cribi|Naga_100678g5.3069.mrna |
| Orig protein id | gnl|cribi|Naga_100678g5.3069 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:766976..768690 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6171 ID=rna6171|Name=rna6171|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
ATGATTCCCTCCGTGTGTTTGTACGAGACGCGTCCGGCATGGGAGGAGGC
GTTGAGGAAGCAGCGAGACCTTCTCTGGAAGTCTACGGTCGATTCAAGGG
ACAAGAAGTCAAGGACGGACGAGGTCATGGCACCGATCACTGTCCACATC
AAATGCGCCAATGCCAAAAAGTACTCGGTTAGCGTGGAGCAGGACAAGCG
CGTCTCCGACTTGAAGTTCGCCATTGAGGCCATGTCCGATATCCCCGCAA
CGCACCAACGCCTTATCCACAAAGGGAAAGTGCTCAAAGATGAGGAGGGC
TTGGCCACGTACACCATCGACAACGATTCCACCGTGCACTTGGTGCGTGC
GCCCTCGGCGACCACGACCTCAGCCCCCCCCGCGTCCACCCACACGGTCC
CTCCCCCGCCCTCCTCCACCACCCCCGCCCCTCCCTTCCCCCCGCCCACG
GGCTCTGGGGCCACCAATCCCTTCGCGGCTTTGATGGGAGGAGCAGGGGG
TGGGCTGGGAGGGTCTCCGGGGTCTACGCCTCCATTCCAGGCAGGGAGCA
ACCCTATGTTTGGCGGGCTCGGTATGGGCCCAGGGGGGTTTCCGAGCGCC
CAAGAACAGCAGAGGATGCAGCAGCAGCTCATGCAGAACCCCGAGATGAT
GGACCAGGTGATGCAGTCTCCCCTTATGCAGCAAATGATGAACTCGCCGG
AGCTAATGCGGAGCATGATGATGGCCAACCCCCAGATCTCTACAGCGGGC
GTTGCGGTCGGCTAA back to topprotein sequence of rna6171 >rna6171-protein ID=rna6171-protein|Name=rna6171|organism=Nannochloropsis gaditana|type=polypeptide|length=125bp
MTDPNTVRAMLQLQRAGIIPNMGPSGVPSPFPPNGPPPSQGAGQGGAGQA
PPLDFSALLNQMGPMGLGSAPPTGPPSMPVADPATRFAPQLQQLRDMGFT
DEARNLQALQATNGNVNAAIERLFM back to topmRNA from alignment at CM002467.1:766976..768690+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6171 ID=rna6171|Name=rna6171|organism=Nannochloropsis gaditana|type=mRNA|length=1715bp|location=Sequence derived from alignment at CM002467.1:766976..768690+ (Nannochloropsis gaditana)
CGTCGTTGTATCCTCACCGTTCCATTTAtcacccctcttccctcccttcc
tctctcctctctccctcctgttgTGCCCCCCTCAGTTCATCCAGCAGATG
ACAGATCCCAACACCGTCCGCGCCATGCTTCAACTTCAACGGGCTGGGAT
CATACCCAAgtgagagggggagggagcgggagagcggaaaggaagaggga
agggaggaaagcggggggggggggggggcatgagCCGCACGTCGGATGGA
GACAGAGAGTAGATTGGACCGGTGCTATGCTCTCTTCCCACATCCATCTT
TACCGCTCATGCTTATCGGTAAtgtccctcccctgctcctcctctttgtc
tgCCCGGCTTCCTTCAGCATGGGCCCCTCCGGCGTGCCcagtcctttccc
tcccaatgGCCCTCCCCCAAGTCAAGgtgcggggcagggaggcgcgGGGC
AAGCCCCTCCTCTGGATTTCTCGGCGCTTCTGAACCAGATGGGCCCCATG
GGGTTGGGCAGTGCGCCTCCCACAGGGGTGCgtcttgggggggggagggg
gggaacgtTGTTCCTGGATGTGAAGACAGGCATTTGAGTGCTCTGAGTGC
GTTTGGCTTTCTTTCATCTGCTTTATTTTCCCGTCGGCAactctccttct
cacccgctcgccctccctcttgttctccctcctttccagccACCCTCCAT
GCCGGTCGCCGACCCCGCCACCCGTTTCGCGCCACAACTGCAGCAACTCC
GCGACATGGGCTTCACGGACGAAGCGCGCAACTTGCAGGTGAGAAGATGC
CGtggggtcaggagggagggaaggggggagaggaggggggaggggccgga
ggtGTCAGACCCTGGGGTATAGagtcagagagggaggaaggagggaagag
gggtagcacgaggaaggggggcgcggacaggaggagctgcgcgAATGTTA
AGCTGCGGGATGACTGACATGGCTCCATAACGCGGACTCGATATTGCAGG
CGTTGCAAGCCACCAACGGGAACGTGAATGCGGCCATTGAACGCCTCTTT
ATGTGAGAAATACCGgacagggaaaaggaaatcaaggagggggggcaaat
AGATACAATTGCCTCAGTCTAGACGAGGCAGTGACGCTTTCATTGAGAGG
AGGGTTGGCACCGACGGCTGGGAAGAGGTGGTGTgcggagagaaggaaga
aaagagaagttGCGCCAACACCGATGCGGAACAAAGGCCCGTTCAAAGAA
GCGGTTGCAAAGGAGAAGGTAGGCCGACGGAGAAATCAGATCTTTTGAGA
TAAATAAAGTAGGGATCATTATTATTTTCGGTGTGAGCTGTATTTATAAG
GTAGGAAAGGGCTttgaggtggaggcaggaacAGAGCTGGACcgagagca
agagggagggtctaTCAAAAATGAGGATGAGTGACCGTAGTAAGGAGAAT
CTCGGCGCATACAGACTTTTGACAAAAATTGTGAAAAGTGGGTTGTTGGT
aagggaggagtcggagCTTTCCCGCTGAGAAAGtgacgaggggagggaaa
atgaagaCGATCAATGGATGCAAATCGGTTTTTTTTGCCGGAAATTGTTT
AACTTTTGTACGAATACGAGTTATTTTTTATCGTAGCCACAAGCACATAT
AGCGACAACCTTAAAAGACGTCTGCGATAGCAACCCTTCAAATGAAAACC
CGTCACACTCGTCCC back to topCoding sequence (CDS) from alignment at CM002467.1:766976..768690+ >rna6171 ID=rna6171|Name=rna6171|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002467.1:766976..768690+ (Nannochloropsis gaditana)
ATGACAGATCCCAACACCGTCCGCGCCATGCTTCAACTTCAACGGGCTGG
GATCATACCCAACATGGGCCCCTCCGGCGTGCCcagtcctttccctccca
atgGCCCTCCCCCAAGTCAAGgtgcggggcagggaggcgcgGGGCAAGCC
CCTCCTCTGGATTTCTCGGCGCTTCTGAACCAGATGGGCCCCATGGGGTT
GGGCAGTGCGCCTCCCACAGGGccACCCTCCATGCCGGTCGCCGACCCCG
CCACCCGTTTCGCGCCACAACTGCAGCAACTCCGCGACATGGGCTTCACG
GACGAAGCGCGCAACTTGCAGGCGTTGCAAGCCACCAACGGGAACGTGAA
TGCGGCCATTGAACGCCTCTTTATGTGAATGACAGATCCCAACACCGTCC
GCGCCATGCTTCAACTTCAACGGGCTGGGATCATACCCAACATGGGCCCC
TCCGGCGTGCCcagtcctttccctcccaatgGCCCTCCCCCAAGTCAAGg
tgcggggcagggaggcgcgGGGCAAGCCCCTCCTCTGGATTTCTCGGCGC
TTCTGAACCAGATGGGCCCCATGGGGTTGGGCAGTGCGCCTCCCACAGGG
ccACCCTCCATGCCGGTCGCCGACCCCGCCACCCGTTTCGCGCCACAACT
GCAGCAACTCCGCGACATGGGCTTCACGGACGAAGCGCGCAACTTGCAGG
CGTTGCAAGCCACCAACGGGAACGTGAATGCGGCCATTGAACGCCTCTTT
ATGTGAATGACAGATCCCAACACCGTCCGCGCCATGCTTCAACTTCAACG
GGCTGGGATCATACCCAACATGGGCCCCTCCGGCGTGCCcagtcctttcc
ctcccaatgGCCCTCCCCCAAGTCAAGgtgcggggcagggaggcgcgGGG
CAAGCCCCTCCTCTGGATTTCTCGGCGCTTCTGAACCAGATGGGCCCCAT
GGGGTTGGGCAGTGCGCCTCCCACAGGGccACCCTCCATGCCGGTCGCCG
ACCCCGCCACCCGTTTCGCGCCACAACTGCAGCAACTCCGCGACATGGGC
TTCACGGACGAAGCGCGCAACTTGCAGGCGTTGCAAGCCACCAACGGGAA
CGTGAATGCGGCCATTGAACGCCTCTTTATGTGAATGACAGATCCCAACA
CCGTCCGCGCCATGCTTCAACTTCAACGGGCTGGGATCATACCCAACATG
GGCCCCTCCGGCGTGCCcagtcctttccctcccaatgGCCCTCCCCCAAG
TCAAGgtgcggggcagggaggcgcgGGGCAAGCCCCTCCTCTGGATTTCT
CGGCGCTTCTGAACCAGATGGGCCCCATGGGGTTGGGCAGTGCGCCTCCC
ACAGGGccACCCTCCATGCCGGTCGCCGACCCCGCCACCCGTTTCGCGCC
ACAACTGCAGCAACTCCGCGACATGGGCTTCACGGACGAAGCGCGCAACT
TGCAGGCGTTGCAAGCCACCAACGGGAACGTGAATGCGGCCATTGAACGC
CTCTTTATGTGA back to top
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