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Properties
| Property Name | Value |
|---|
| Product | plectin-like protein |
| Orig transcript id | gnl|cribi|Naga_100447g2.3128.mrna |
| Orig protein id | gnl|cribi|Naga_100447g2.3128 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:762156..763718 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6169 ID=rna6169|Name=rna6169|organism=Nannochloropsis gaditana|type=mRNA|length=2434bp
CGATGCGTGCTCCTGATGGTGGTGCTCTTCCCTCATGAGCTGTTGCATGG
ATCTGTACCGGACCAAGACCTCCTTCATCTTCTCGATCAGCTTGGCATTT
TCCGCCCTCAGTCGTAGCACCTCCTCGTCCTTCCCTCCCTCATTCTCTCC
CTCCTTCCCTCCCTCCTTCCCGTCGATGGCCCGCGCCAAGGCTACTTCTA
ACGCCGCTACCCGCTCTGCCCTTTCCTCGTTCTGTGCCTTCACCTCCCCG
GCCGCCTTTTGCAAGCCTCGGTAGCGACCCAACAGCTCCTTCATCTTCGC
CATCAGCTTCTCCTTCTCCTCTTGGGCAGCCTTGAGCGCCTCGTCGCCGC
CGTGGGAACTAGCACCCTCGGCCCTTTGAGGGCGGTCCCCTCGGGGGGAC
GTGAGTGACACTTCGTTGAACCGGGACTCCAACGTCCTGTATTGTTCTTC
CAGCGCTGCGTATCGCTCGGCCAGGGAGGAGGTCGGTGCGTTCCTTGTCG
GTGGGGATGGTAAATCCGCATCATTGTCGACTTTTGCGCCGTCGAACCCT
CCGCCTCCGTCCTTGCCTTTGCTGCGGCGAAGATAAACCAACTCTTCTTC
CAATACTCGGAGCTTGGTGACTTGACCCTGACAGAGCGCCAGGAGTTCTC
CGCGCGTACACCCTTCGTATTTGCACGCGACTTCCGGTGGGCGAGGCGGG
GAGGATGTCTGCGGCGAGTCATGGGAGCAGGACTGCGAGCGTTGTAATCC
GTCGAGGTCAAAAGCCGTGGAGGAGGCTTTTTTCAGCTTTTCCGCTGCTT
CCTTGGCCTTGGACAGGAAATCCATGGGCACCTGCATGAGAAACGTGCAA
CGAATCGAGCCGTAAGATTAATTTGTGGGAGGAAGGGCAGGACCCCTCCA
ACGACGAGAGGAGCGGCCCGACCGGAACAATGACAAGGAGTCAAAAAATT
CAAGGTGAAGGGCGTGAACGAGGGTGCATCATGCAACCTGCACACGTTGC
ATGACATTTTCATGATGCATAAAGGTCCTAGTTAGGGTCTCGGGGAGGAA
TAGACGCCTAAATGGAACGAATCGCTTGCTTTATCACATTGACTGCATCC
TCGCTCAGCGAGCCCGGGAAAGGTGGGCGATGACCTACCCAATACAAATT
TAAGAGGAAACAAACGTGCCCGAGAAGTACACTGGGCTGAAGCCGTCCAC
GAATGGAGACTTGTTGAATGTAAAATGCCCAGACTGGTGCTTGGTACCAT
TCAATTAGGTCTTTGGCAGGAGTCAGGATTGCGAGTGCAGTCACAGGCAG
CCTCCCCCTCCTCCCTCCCTTCTCCAATCAGCGTGCAGTTAGAAGACCTT
CAGGACAGAGCAAGCCATGGATAAGGCTGACGGAGACGATGGAAAGATAG
TCATCAAGGTGAAGACGCTCAAGGGGGGAGGAGAAAACAGCGTCTCCTTG
AAAGTGGTTCCTAATATGACAATTGGAGAGCTGAAGGCACAAATCGCGGC
GAGTGCCTTGGAAGTTCCTTGCGAATCCCAACGCCTGGTTTTTCAGGGGT
GCATGCTCAAGGACGACCGCAAAACGCTTGCCGAGCACAAGCTGACCGAA
GGCTCCTGTGTCCTACTTTCGGTGCTATCTCCCAGCGTGAGCAACCGCGG
CAGCAGCGCCTCCCCCTCCATTGCAAGCCCTGCCTCTTCATTACCTTCCA
ACCCAAGCCCGAACAACCCCACAAGTTTACCTTCCCCTGTGATCCCTTCG
CCCTCCTCCACTGCTTCCCCGGCCGTCGTCATCCTACGTGCCGCCATTAC
CGGTGTTCGTAGCTCCAATTCCCCCGAGGTGGGGACGCTCGCCCTTCAGA
CCTTGTCCACAATGCTCGGGAATATCATCGCCAACCCCATGGAGGAGAAA
TTCCGGCAATTTAAAAAGTCAAATCCAGCATTCCTTCGAAGGGTGGGCTC
GGCCTCAGGCACTGGGGCCATCCTGCGGGCGGCTGGATTCCAGGAGTCTG
CGCAAACATGGGTCCTGCAACCCTCGGAGCAAGGGTGGGGTGTCTTGTGT
ACTGCCAAAGGGGAAATCGACGCGGCGATTGCCGCCCTGCCTCCCTCCCT
TCCTCCCCCGGGACCTGGAGCGTCTGGACGACAGCCGGCGATGGCGGGTT
TGGGGGGAGGGCTGGAGGGAGGGGGTGGGGGAGGGAGGGGCGCAAGAATG
GACCCTACGATGCTGGCCACATTGATGGGAATGATGCAGAGCAACCCGGC
CTTACGCGCCCAAGCCCTCCGGTTGTTCGGTGCCAGCGACGGTCCCGGGC
AGGCAAGGAGCGTCGAAGCTCTCCTGAATAACCCGGCGCTTGTGAACCAG
CTAGCGCAGCAGTACGAGGTGAGGGAAGTGGAAGGGGGGGGGAGTCGCAG
GGGAAGGAAGCGATGGAGGGAGGGCTGCGGGTGA back to topprotein sequence of rna6169 >rna6169-protein ID=rna6169-protein|Name=rna6169|organism=Nannochloropsis gaditana|type=polypeptide|length=394bp
MRDSRPPPPSAGTSSPYLRLPPLLQDRHLKELVDLRAEHTHLLERANEEQ
AKLLEGVQQELERRTEAFELYRARAHTALKRGANEQRDHDVKVEKMRARM
MEVEEKLVEMERERKRDKQALKEVGEEASDRAQALRTAMAEAEVRPRPPL
DGSLGSVDAEEAFIQAARVQSRRDEEVKRLTQQVQGLQVRIREREEAMQD
MDAQGRAAAREWELSERGGKEAQDRLTYLKNAVYRYLRSPPEAGSERAAL
VPVICTILRFSQSETLEVQQAVTGVGAGSALPATIGALSTFFWGGGGGGG
GGGGGGGSSVSRQAHPHLITPRRQSTSMTEESPSITSSSSSSASLGTGGA
GRGGEEGRGRSREGLREGMRERNAEAPAEKEGEGGTSILESQEL back to topmRNA from alignment at CM002467.1:762156..763718+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6169 ID=rna6169|Name=rna6169|organism=Nannochloropsis gaditana|type=mRNA|length=1563bp|location=Sequence derived from alignment at CM002467.1:762156..763718+ (Nannochloropsis gaditana)
ATGAGAGACTcgaggcctccccctccctccgccggcacctcctcccccta
cttgcgcctcccgcccctccttcaagaCAGGCACTTGAAGGAACTGGTCG
ACCTCCGTGCCGAGCACACGCACCTTCTGGAACGTGCCAATGAAGAACAA
GCGAAGCTTCTAGAAGGAGTGCAGCAGGAACTGGAAAGGCGCACGGAGGC
CTTTGAATTGTACCGGGCACGAGCGCACACGGCCCTGAAAAGAGGCGCGA
ACGAGCAGCGGGACCATGATGTTAAAGTGGAGAAAATGCGGGCCAGGAtg
atggaagtggaagagaaACTGGTGGAGATGGAACGAGAGCGGAAGAGGGA
CAAGcaggccttgaaggaggtgggggaagaagcaTCGGATCGGGCCCAGG
CACTGAGAACGGCGATGGCTGAAGCGGAAGTACGGTTCCGGCACGCCGAG
gaggggtggcgggaggagaaagaggggtgggagaggcagtgggagagggg
aaacgaggagagggcggcagAGCGAAGCGCCTGGGAGGCgcgatggaaag
ggaaggaggaggcggaagaagcgtggaagaaggaggtggagaaggctcgc
aaggagggcaaaacGAAAGGGGACCTGGCCCGGAAACTtttgggggagaa
agaggcagaaaTCGAGGCGCTGCGCCGTGCTTTGCAGGCAcgtgaggcgg
aggaagccccGCGCCGTCTCGGTCCACCATCGCCGACCCgtccgaaggag
gaggttagcgccccctcccttggatcccccgccccatccctccctccacc
cccctctcccagcccccgccctcctttggACGGTTCCCTCGGCAGTgtgg
acgcggaggaggccttcATTCAGGCGGCACGCGTGCAATCCCggcgggac
gaggaagtgaAGCGGCTCACGCAACAGGTCCAAGGGCTCCAGGTCCGGAT
Ccgagagcgggaagaggcgatgcaggacatggacgcacaagggcgggcgg
cagcCCGGGAGTGGGAGCTTTCGGAGcgcggtgggaaggaggcacAAGAT
CGATTGACGTATTTAAAAAATGCGGTCTATCGCTACCTCCGGTCCCCGCC
AGAGGCAGGAAGCGAACGCGCTGCCCTCGTGCCGGTGATATGCACCATTT
TACGATTTTCTCAGAGTGAGACGCTGGAGGTTCAGCAGGCAGTGACGGGT
GTCGGAGCAGGAAGTGCTTTGCCGGCTACTATCGGGGCCCTGTCGACGTT
CTTctggggaggtggaggaggaggaggaggaggaggaggaggaggaggga
gtagTGTTTCCAGGCAGGCGCATCCGCACCTGATAACACCACGGCGGCAG
AGTACCAGCATGACGGAGGAATCGCCGTCCATtacgtcgtcctcgtcttc
ctcggcTTCCTTGGGCactggaggggcgggaagggggggggaagagggga
ggggaaggagcagggaggggttgCGAGAAGGAATGCGAGAGCGCAATGCG
GAGGCCCCggcagaaaaagagggagaaggaggaaccAGTATTCTTGAATC
TCAAGAGTTGTAA back to topCoding sequence (CDS) from alignment at CM002467.1:762156..763718+ >rna6169 ID=rna6169|Name=rna6169|organism=Nannochloropsis gaditana|type=CDS|length=2370bp|location=Sequence derived from alignment at CM002467.1:762156..763718+ (Nannochloropsis gaditana)
ATGAGAGACTcgaggcctccccctccctccgccggcacctcctcccccta
cttgcgcctcccgcccctccttcaagaCAGGCACTTGAAGGAACTGGTCG
ACCTCCGTGCCGAGCACACGCACCTTCTGGAACGTGCCAATGAAGAACAA
GCGAAGCTTCTAGAAGGAGTGCAGCAGGAACTGGAAAGGCGCACGGAGGC
CTTTGAATTGTACCGGGCACGAGCGCACACGGCCCTGAAAAGAGGCGCGA
ACGAGCAGCGGGACCATGATGTTAAAGTGGAGAAAATGCGGGCCAGGAtg
atggaagtggaagagaaACTGGTGGAGATGGAACGAGAGCGGAAGAGGGA
CAAGcaggccttgaaggaggtgggggaagaagcaTCGGATCGGGCCCAGG
CACTGAGAACGGCGATGGCTGAAGCGGAAGTACGcccccgccctcctttg
gACGGTTCCCTCGGCAGTgtggacgcggaggaggccttcATTCAGGCGGC
ACGCGTGCAATCCCggcgggacgaggaagtgaAGCGGCTCACGCAACAGG
TCCAAGGGCTCCAGGTCCGGATCcgagagcgggaagaggcgatgcaggac
atggacgcacaagggcgggcggcagcCCGGGAGTGGGAGCTTTCGGAGcg
cggtgggaaggaggcacAAGATCGATTGACGTATTTAAAAAATGCGGTCT
ATCGCTACCTCCGGTCCCCGCCAGAGGCAGGAAGCGAACGCGCTGCCCTC
GTGCCGGTGATATGCACCATTTTACGATTTTCTCAGAGTGAGACGCTGGA
GGTTCAGCAGGCAGTGACGGGTGTCGGAGCAGGAAGTGCTTTGCCGGCTA
CTATCGGGGCCCTGTCGACGTTCTTctggggaggtggaggaggaggagga
ggaggaggaggaggaggagggagtagTGTTTCCAGGCAGGCGCATCCGCA
CCTGATAACACCACGGCGGCAGAGTACCAGCATGACGGAGGAATCGCCGT
CCATtacgtcgtcctcgtcttcctcggcTTCCTTGGGCactggaggggcg
ggaagggggggggaagaggggaggggaaggagcagggaggggttgCGAGA
AGGAATGCGAGAGCGCAATGCGGAGGCCCCggcagaaaaagagggagaag
gaggaaccAGTATTCTTGAATCTCAAGAGTTGTAAATGAGAGACTcgagg
cctccccctccctccgccggcacctcctccccctacttgcgcctcccgcc
cctccttcaagaCAGGCACTTGAAGGAACTGGTCGACCTCCGTGCCGAGC
ACACGCACCTTCTGGAACGTGCCAATGAAGAACAAGCGAAGCTTCTAGAA
GGAGTGCAGCAGGAACTGGAAAGGCGCACGGAGGCCTTTGAATTGTACCG
GGCACGAGCGCACACGGCCCTGAAAAGAGGCGCGAACGAGCAGCGGGACC
ATGATGTTAAAGTGGAGAAAATGCGGGCCAGGAtgatggaagtggaagag
aaACTGGTGGAGATGGAACGAGAGCGGAAGAGGGACAAGcaggccttgaa
ggaggtgggggaagaagcaTCGGATCGGGCCCAGGCACTGAGAACGGCGA
TGGCTGAAGCGGAAGTACGcccccgccctcctttggACGGTTCCCTCGGC
AGTgtggacgcggaggaggccttcATTCAGGCGGCACGCGTGCAATCCCg
gcgggacgaggaagtgaAGCGGCTCACGCAACAGGTCCAAGGGCTCCAGG
TCCGGATCcgagagcgggaagaggcgatgcaggacatggacgcacaaggg
cgggcggcagcCCGGGAGTGGGAGCTTTCGGAGcgcggtgggaaggaggc
acAAGATCGATTGACGTATTTAAAAAATGCGGTCTATCGCTACCTCCGGT
CCCCGCCAGAGGCAGGAAGCGAACGCGCTGCCCTCGTGCCGGTGATATGC
ACCATTTTACGATTTTCTCAGAGTGAGACGCTGGAGGTTCAGCAGGCAGT
GACGGGTGTCGGAGCAGGAAGTGCTTTGCCGGCTACTATCGGGGCCCTGT
CGACGTTCTTctggggaggtggaggaggaggaggaggaggaggaggagga
ggagggagtagTGTTTCCAGGCAGGCGCATCCGCACCTGATAACACCACG
GCGGCAGAGTACCAGCATGACGGAGGAATCGCCGTCCATtacgtcgtcct
cgtcttcctcggcTTCCTTGGGCactggaggggcgggaagggggggggaa
gaggggaggggaaggagcagggaggggttgCGAGAAGGAATGCGAGAGCG
CAATGCGGAGGCCCCggcagaaaaagagggagaaggaggaaccAGTATTC
TTGAATCTCAAGAGTTGTAA back to top
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