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Properties
| Property Name | Value |
|---|
| Product | dna replication licensing factor mcm5 |
| Orig transcript id | gnl|cribi|Naga_100175g9.9488.mrna |
| Orig protein id | gnl|cribi|Naga_100175g9.9488 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:731752..733325 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6156 ID=rna6156|Name=rna6156|organism=Nannochloropsis gaditana|type=mRNA|length=1645bp
GTAAAAAGATCCTATCGTCTCACAAGATGGTTACAAGTGACTTTGGCGTT
GCCTTAAATCAGAACAAAGCCTTCAACCCGTCCGATTCCTTTTTTTCTCC
TTGCGCATTGATACAGCAAAAGACATGGCGCGGCCAACATACGTGCGCCT
CCTACCAAAACATGCCAACGTTCTCCTCTCAGCAGCCGTTCTCCTAAAAT
GTCTCACCCTGGCGCTCTACTTAGTCGCCCTCTCCCACCGCAATGGGTGG
GCGCATTCGAAAACGACGAGCAGCAATGGTTTGATCACATACACGGGTCA
TTGGGGCCTCTTTGTGGCCCGCTTTGAGGGGGACTATAAGGTCGGGGGGG
TGGAGGCACATTATACAAGCACTGAACCCATTTCGGGCTGGGCCTCGGTG
GCAGGCGGCAACAACACGGTCTTGCACAAGGTTCGGACGGTTCAGGCCTT
TTCCATTATCGGGGGCGTGGTGAAGATCCTGGGCACCGTGTCCTTTGTCT
CGGGACGCTTTGCCGCCCGCACGGCCGCCCAAGCCTTGGCTTTGCTCGAC
CGCGGTCGCCTTTTGAACGTGAGCTTTCTGCTTTGCAACCTGCTCGTCAC
TGCCGTATGGGCTTCTCTCCCCGAGAACGCTTTTTTCTTCTTCTGCAACG
TCTACCCTCAGGAAGAGGGCGTGTCCTCCTGCATCTCCACCCATTTCACC
CCTCCCTTGGGAAACAGCGAATGGGAAGGTCGTTCCTATTCCTTCGACTT
GGTCGTTGCGGCCACGGTGTGTGCCGTCCTAGCCGCCCTGGCAGGTGCCT
TGGCCCGAAGACCGTTACGAAAATTGGCGGAAGAGGAGGACATGGGGATG
GGGGGCGGGCGGGACGGAAGGGGGGGGACGGCGGGGGGTGCAAGGATGCT
CGGAGGCTCGGCAATATTGGACTTGGACCAACCCTTGCTGGTAGAAGGGG
GAGTGGGGAGGGATGGAGGGCGAGAGGGAGCAGGCGTGGCCGTGAATCCC
TCCGCACCGCCCAGTGAGAAAGTGTGAACGTCTGAAGGAGGGGGAGGCCA
GGAGCGAGGACAGGCAGGCTTGGGGGGAAGGAGCAGGAGGAGGGAGGGAG
AGAGGGAGGGACAAAGGGAGGGCGGGTGCTTGGTGGGGAGGGAGGCGGCG
TGCCTCCTGCCGTGTCGATGGAGCAGGAGGATGGCGGGTGTACCCCTGTT
CAGTCCTTTGGTCTCGACGAGGGGGTGTAACATTTGGGCGGGAAAAATGC
GTGAAAACTTTGGACAAATCGTGAGCCCACGGGCGTTTGGAACTTCCAAG
GTGCCTGTTGTTACGCTGTGGGGTATAGTTGGATTGATATGATGCGGGGG
AAAATGCCGGAATGGCACGCTTGTCTGCACGGCCCCGGTTTCGGTTTCGA
CGGCTGTTGCCAGGCATGACACTTCGCCGCGAAGACTTTTAACGAAGTTG
TAACGGGTTGTGAAAATTTTACATTTCTGGGAAAGATTTGACACCCCCGC
CTTGCCCGTGCGCACATGGCAAGTTAAAATATGTCACCAAAGATGCAAGT
ATTCGCATTGACTACATGGTTGACGCGCTCCCGGAGAGGCCGCTCGGTGG
TGGTGTCTTGCCTGATCCAGTCGAACACTTTCTACTCCAGTATTT back to topprotein sequence of rna6156 >rna6156-protein ID=rna6156-protein|Name=rna6156|organism=Nannochloropsis gaditana|type=polypeptide|length=281bp
MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTI
LSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDID
MPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNS
PTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALA
ADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGY
SHPALVRAISLLIRRGELMERDRGRVLKRIR back to topmRNA from alignment at CM002467.1:731752..733325- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6156 ID=rna6156|Name=rna6156|organism=Nannochloropsis gaditana|type=mRNA|length=1574bp|location=Sequence derived from alignment at CM002467.1:731752..733325- (Nannochloropsis gaditana)
AGGTGGCCATCCACGAGGCCATGGAGCAGCAGACTATTTCGATCGCCAAG
GTGCGTCAATCTTGTGTTTTTTGCCTTTCGCGCCATTTTTCCCGACCACA
CTCATGCTTCTGTAGCACAATTGATCACCACGCACGTGCTCCTGCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTCCGT
CCCTCCCTCAGGCGGGCATCACGACCGTCCTCAACACCCGTGCCTCCGTT
CTGGCCGCCGCCAATCCCATCTTCGGGCGCTACGACGACTTGAAATCCGC
AGCTGAGAACATCGACCTCATGACCACCATCCTTTCCCGCTTCGACCTGA
TATTCATCGTCCGGGACATTCGGGACGAAGAACGGGACAGGGGCATTGCT
CGGCACGTCCTCGGGGTCCACATGAACGCGAACGCGCCGGCGGGGATCCG
CGTCACGCAGGGGGCGGAGGGGGATATTGACATGCCCACCATCAAGAAAT
TCGTCAGGTGCGTGCCTCCCTTCTGCCCCCTTCCCGTCCGCCTTCTGCCC
TCCCAGCTCCCTCGTCCTCTTCCATCACCAAGCCCCTTATTCTCGAACCC
TGAACCCCTTTCTTTGCCCCTCACCCACCCTCCTTGCCTTCTTTCCCCAG
CTACTGTCGACAACGCTGTGCCCCCCGCCTCTCCGTCGAAGCAGGGCAGA
CCCTGGCGAGCGAGTACGTGGGCATTCGGGATACCGTGCGCCGTCGCACC
CTCGAGTCCGAGGTAGGTGGATCGATCCCCTTTGTTTTCCTCCTGTCACT
TTGGAGAAAGCCCGTTGTCCATCGGATCGTGACGCGCATCTCCCTTGACC
TTCTCCTTCCCTCCGCCCCCCCCACCCTCTGGTGGGTCCTCCCTCCCTCC
CTCCCTCTCCCCCTCCCTCAGGATGGCAACAGCCCCACCGTTCCCATCAC
AGTCCGCCAGCTGGAAGCCTTGGTGCGAATCAGCGAGTCCCTGGCCAAGA
TGCGTCTGCGCGCGGAAGTGACACAGGAGGACGTCCGAGAGGCGATCCGA
TTGTTTCAGGCCTCCACCGGCGTGGCGCTCGCGGCCGGTGAGCAACAGGG
AGCCACCTTCCCATCCTCATTCCCGCCCACCTTTCCCTGACTCCCTCGCC
ATCCTTCCTTAATGCCTGTCTTGTCACCTGCACGGCCCAGCCTCTGGCCA
GTGTGGAAACACAATCTCGGACGTCCCTCTGCAAACGGCATGAACCGGCT
CATTTCACCCGCCCATCCACCTTCATTGTTCCCTCCTCTCCTCCCTTCCT
CCACTTCCCCCTCTCTCCTCCCCACCAACTAGATTACAACGGGGACCCTA
CCCGCACCATGGGCTTCGAACGTCCCGAACAAGTCGCCCGGGCGGAGGAA
TTCCTCAAGCGGCGGATTCCCTTGGGGAGCACCACCAAAACGAGCCGGAT
CCAGGAAGAAGGAACAGGGCAAGGCTACAGTCACCCAGCCTTGGTGCGTG
CGATCTCCCTACTCATCCGACGCGGGGAGTTGATGGAAAGGGATCGGGGG
AGGGTGTTGAAGAGAATCCGGTAG back to topCoding sequence (CDS) from alignment at CM002467.1:731752..733325- >rna6156 ID=rna6156|Name=rna6156|organism=Nannochloropsis gaditana|type=CDS|length=4230bp|location=Sequence derived from alignment at CM002467.1:731752..733325- (Nannochloropsis gaditana)
ATTACAACGGGGACCCTACCCGCACCATGGGCTTCGAACGTCCCGAACAA
GTCGCCCGGGCGGAGGAATTCCTCAAGCGGCGGATTCCCTTGGGGAGCAC
CACCAAAACGAGCCGGATCCAGGAAGAAGGAACAGGGCAAGGCTACAGTC
ACCCAGCCTTGGTGCGTGCGATCTCCCTACTCATCCGACGCGGGGAGTTG
ATGGAAAGGGATCGGGGGAGGGTGTTGAAGAGAATCCGGTAGGATGGCAA
CAGCCCCACCGTTCCCATCACAGTCCGCCAGCTGGAAGCCTTGGTGCGAA
TCAGCGAGTCCCTGGCCAAGATGCGTCTGCGCGCGGAAGTGACACAGGAG
GACGTCCGAGAGGCGATCCGATTGTTTCAGGCCTCCACCGGCGTGGCGCT
CGCGGCCGCTACTGTCGACAACGCTGTGCCCCCCGCCTCTCCGTCGAAGC
AGGGCAGACCCTGGCGAGCGAGTACGTGGGCATTCGGGATACCGTGCGCC
GTCGCACCCTCGAGTCCGAGGCGGGCATCACGACCGTCCTCAACACCCGT
GCCTCCGTTCTGGCCGCCGCCAATCCCATCTTCGGGCGCTACGACGACTT
GAAATCCGCAGCTGAGAACATCGACCTCATGACCACCATCCTTTCCCGCT
TCGACCTGATATTCATCGTCCGGGACATTCGGGACGAAGAACGGGACAGG
GGCATTGCTCGGCACGTCCTCGGGGTCCACATGAACGCGAACGCGCCGGC
GGGGATCCGCGTCACGCAGGGGGCGGAGGGGGATATTGACATGCCCACCA
TCAAGAAATTCGTCAGATGGAGCAGCAGACTATTTCGATCGCCAAGATTA
CAACGGGGACCCTACCCGCACCATGGGCTTCGAACGTCCCGAACAAGTCG
CCCGGGCGGAGGAATTCCTCAAGCGGCGGATTCCCTTGGGGAGCACCACC
AAAACGAGCCGGATCCAGGAAGAAGGAACAGGGCAAGGCTACAGTCACCC
AGCCTTGGTGCGTGCGATCTCCCTACTCATCCGACGCGGGGAGTTGATGG
AAAGGGATCGGGGGAGGGTGTTGAAGAGAATCCGGTAGGATGGCAACAGC
CCCACCGTTCCCATCACAGTCCGCCAGCTGGAAGCCTTGGTGCGAATCAG
CGAGTCCCTGGCCAAGATGCGTCTGCGCGCGGAAGTGACACAGGAGGACG
TCCGAGAGGCGATCCGATTGTTTCAGGCCTCCACCGGCGTGGCGCTCGCG
GCCGCTACTGTCGACAACGCTGTGCCCCCCGCCTCTCCGTCGAAGCAGGG
CAGACCCTGGCGAGCGAGTACGTGGGCATTCGGGATACCGTGCGCCGTCG
CACCCTCGAGTCCGAGGCGGGCATCACGACCGTCCTCAACACCCGTGCCT
CCGTTCTGGCCGCCGCCAATCCCATCTTCGGGCGCTACGACGACTTGAAA
TCCGCAGCTGAGAACATCGACCTCATGACCACCATCCTTTCCCGCTTCGA
CCTGATATTCATCGTCCGGGACATTCGGGACGAAGAACGGGACAGGGGCA
TTGCTCGGCACGTCCTCGGGGTCCACATGAACGCGAACGCGCCGGCGGGG
ATCCGCGTCACGCAGGGGGCGGAGGGGGATATTGACATGCCCACCATCAA
GAAATTCGTCAGATGGAGCAGCAGACTATTTCGATCGCCAAGATTACAAC
GGGGACCCTACCCGCACCATGGGCTTCGAACGTCCCGAACAAGTCGCCCG
GGCGGAGGAATTCCTCAAGCGGCGGATTCCCTTGGGGAGCACCACCAAAA
CGAGCCGGATCCAGGAAGAAGGAACAGGGCAAGGCTACAGTCACCCAGCC
TTGGTGCGTGCGATCTCCCTACTCATCCGACGCGGGGAGTTGATGGAAAG
GGATCGGGGGAGGGTGTTGAAGAGAATCCGGTAGGATGGCAACAGCCCCA
CCGTTCCCATCACAGTCCGCCAGCTGGAAGCCTTGGTGCGAATCAGCGAG
TCCCTGGCCAAGATGCGTCTGCGCGCGGAAGTGACACAGGAGGACGTCCG
AGAGGCGATCCGATTGTTTCAGGCCTCCACCGGCGTGGCGCTCGCGGCCG
CTACTGTCGACAACGCTGTGCCCCCCGCCTCTCCGTCGAAGCAGGGCAGA
CCCTGGCGAGCGAGTACGTGGGCATTCGGGATACCGTGCGCCGTCGCACC
CTCGAGTCCGAGGCGGGCATCACGACCGTCCTCAACACCCGTGCCTCCGT
TCTGGCCGCCGCCAATCCCATCTTCGGGCGCTACGACGACTTGAAATCCG
CAGCTGAGAACATCGACCTCATGACCACCATCCTTTCCCGCTTCGACCTG
ATATTCATCGTCCGGGACATTCGGGACGAAGAACGGGACAGGGGCATTGC
TCGGCACGTCCTCGGGGTCCACATGAACGCGAACGCGCCGGCGGGGATCC
GCGTCACGCAGGGGGCGGAGGGGGATATTGACATGCCCACCATCAAGAAA
TTCGTCAGATGGAGCAGCAGACTATTTCGATCGCCAAGATTACAACGGGG
ACCCTACCCGCACCATGGGCTTCGAACGTCCCGAACAAGTCGCCCGGGCG
GAGGAATTCCTCAAGCGGCGGATTCCCTTGGGGAGCACCACCAAAACGAG
CCGGATCCAGGAAGAAGGAACAGGGCAAGGCTACAGTCACCCAGCCTTGG
TGCGTGCGATCTCCCTACTCATCCGACGCGGGGAGTTGATGGAAAGGGAT
CGGGGGAGGGTGTTGAAGAGAATCCGGTAGGATGGCAACAGCCCCACCGT
TCCCATCACAGTCCGCCAGCTGGAAGCCTTGGTGCGAATCAGCGAGTCCC
TGGCCAAGATGCGTCTGCGCGCGGAAGTGACACAGGAGGACGTCCGAGAG
GCGATCCGATTGTTTCAGGCCTCCACCGGCGTGGCGCTCGCGGCCGCTAC
TGTCGACAACGCTGTGCCCCCCGCCTCTCCGTCGAAGCAGGGCAGACCCT
GGCGAGCGAGTACGTGGGCATTCGGGATACCGTGCGCCGTCGCACCCTCG
AGTCCGAGGCGGGCATCACGACCGTCCTCAACACCCGTGCCTCCGTTCTG
GCCGCCGCCAATCCCATCTTCGGGCGCTACGACGACTTGAAATCCGCAGC
TGAGAACATCGACCTCATGACCACCATCCTTTCCCGCTTCGACCTGATAT
TCATCGTCCGGGACATTCGGGACGAAGAACGGGACAGGGGCATTGCTCGG
CACGTCCTCGGGGTCCACATGAACGCGAACGCGCCGGCGGGGATCCGCGT
CACGCAGGGGGCGGAGGGGGATATTGACATGCCCACCATCAAGAAATTCG
TCAGATGGAGCAGCAGACTATTTCGATCGCCAAGATTACAACGGGGACCC
TACCCGCACCATGGGCTTCGAACGTCCCGAACAAGTCGCCCGGGCGGAGG
AATTCCTCAAGCGGCGGATTCCCTTGGGGAGCACCACCAAAACGAGCCGG
ATCCAGGAAGAAGGAACAGGGCAAGGCTACAGTCACCCAGCCTTGGTGCG
TGCGATCTCCCTACTCATCCGACGCGGGGAGTTGATGGAAAGGGATCGGG
GGAGGGTGTTGAAGAGAATCCGGTAGGATGGCAACAGCCCCACCGTTCCC
ATCACAGTCCGCCAGCTGGAAGCCTTGGTGCGAATCAGCGAGTCCCTGGC
CAAGATGCGTCTGCGCGCGGAAGTGACACAGGAGGACGTCCGAGAGGCGA
TCCGATTGTTTCAGGCCTCCACCGGCGTGGCGCTCGCGGCCGCTACTGTC
GACAACGCTGTGCCCCCCGCCTCTCCGTCGAAGCAGGGCAGACCCTGGCG
AGCGAGTACGTGGGCATTCGGGATACCGTGCGCCGTCGCACCCTCGAGTC
CGAGGCGGGCATCACGACCGTCCTCAACACCCGTGCCTCCGTTCTGGCCG
CCGCCAATCCCATCTTCGGGCGCTACGACGACTTGAAATCCGCAGCTGAG
AACATCGACCTCATGACCACCATCCTTTCCCGCTTCGACCTGATATTCAT
CGTCCGGGACATTCGGGACGAAGAACGGGACAGGGGCATTGCTCGGCACG
TCCTCGGGGTCCACATGAACGCGAACGCGCCGGCGGGGATCCGCGTCACG
CAGGGGGCGGAGGGGGATATTGACATGCCCACCATCAAGAAATTCGTCAG
ATGGAGCAGCAGACTATTTCGATCGCCAAG back to top
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