EWM24533.1, cds6141 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|585106041|gb|EWM24533.1| (dna replication licensing factor mcm5 [Nannochloropsis gaditana]) HSP 1 Score: 565.459 bits (1456), Expect = 0.000e+0 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR
Sbjct: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|298714028|emb|CBJ27260.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 334.339 bits (856), Expect = 1.620e-106 Identity = 185/286 (64.69%), Postives = 221/286 (77.27%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGA-EGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLE-SEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPE---QVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTIS+AKAGITT+LN+R SVLAAANPI+GRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDR IA+HV+ VH+NA+ V GA EGDID+ T+KKFVSYCR +CAPRLS A L+S+YV IR+ VRRRTLE ED + VPITVRQLEALVR+SESLAKMRL AEV+ +DV+EA+RLF+ ST +AA G +G RPE +V RAE+FLKRRI + ST ++ EE TGQG+ A+ RAI+++ RGEL E++RG +L R R
Sbjct: 460 MEQQTISVAKAGITTILNSRTSVLAAANPIYGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRSIAKHVMSVHINASG-----VNAGAQEGDIDIATMKKFVSYCRLKCAPRLSEAAATMLSSQYVSIREDVRRRTLELGEDAQA--VPITVRQLEALVRLSESLAKMRLSAEVSSQDVQEALRLFKVST---MAAASAGSTAGDLGSLRPETQQEVRRAEDFLKRRIAVRSTVNRKKVGEEATGQGHPATAVTRAIAIMAVRGELQEKNRGFLLYRAR 735
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|219115796|ref|XP_002178693.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409460|gb|EEC49391.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 321.627 bits (823), Expect = 2.624e-102 Identity = 164/290 (56.55%), Postives = 215/290 (74.14%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESE------DGNSPT-VPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERP--EQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTIS+AKAGITTVLN+R+SVLAAANP+FGRYDD KSA+ENIDLMTTILSRFD+IF+VRDIR+EERDR I +HV+G+H+ A+ + G G +D+P +KK++ YC+ RC+PRLS EAG+ L S YV IRD VRRR + S DG++ + +PITVRQLEALVR+SESLAKMRL +V EDV EA+RLF+ ST A A D N T P E++ R E FL+ R+ +GS R+ EEG+GQG++ + RA+S++ RGE++ER++GR+LKR++
Sbjct: 383 MEQQTISVAKAGITTVLNSRSSVLAAANPVFGRYDDFKSASENIDLMTTILSRFDVIFLVRDIREEERDRLICQHVMGIHIGAS-----NRSDGGLGHLDVPAMKKYIQYCKARCSPRLSEEAGEVLTSSYVKIRDDVRRRAIASSGRSDGRDGDTQSAIPITVRQLEALVRLSESLAKMRLDPQVRSEDVTEALRLFKVSTMAANAVDQNLGETSYASVSAPNREEMERTEAFLRSRLNVGSMVNKQRLVEEGSGQGFNAILIARALSIMASRGEVLERNQGRLLKRVK 667
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|223993407|ref|XP_002286387.1| (mcm5-like protein [Thalassiosira pseudonana CCMP1335] >gi|220977702|gb|EED96028.1| mcm5-like protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 320.857 bits (821), Expect = 8.252e-102 Identity = 163/281 (58.01%), Postives = 212/281 (75.44%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITTVLN+R+SVLAAANP+FGRYDDLKSA+ENIDLM+TILSRFDLIF+VRD+RDE RDR I RHV+GVH+ + G GA G++D+PT+KK++ YC+ +CAPRLS EAG LAS YV IRD VR+RT++S + +PITVRQLEALVR+SESLAKMRL ++V ED+ EA+RLF+ ST A + D +T E++ RAE FL+ R+ +G+ RI EE QGY+ + RA+S+++ RGE+ ER++ R++KR+R
Sbjct: 414 MEQQTISIAKAGITTVLNSRSSVLAAANPVFGRYDDLKSASENIDLMSTILSRFDLIFLVRDVRDETRDRMICRHVMGVHIGNSGGEG----DGA-GELDVPTMKKYIQYCKAKCAPRLSDEAGDILASSYVKIRDDVRKRTMDSGQAQA-AIPITVRQLEALVRVSESLAKMRLDSQVQSEDIAEALRLFKVSTMTANSTD------QTNAMPSQEELMRAETFLRSRLAIGAVLNKQRIVEEAAAQGYNAMTIARAMSIMVARGEVQERNQSRMVKRVR 682
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|1072236657|gb|OEU21385.1| (MCM-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 318.546 bits (815), Expect = 1.065e-100 Identity = 169/292 (57.88%), Postives = 215/292 (73.63%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLES--EDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADY-NG--------DPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITTVLN+R++VLAAANP+FGRYDD KSA+ENIDLMTTILSRFD+IF+VRDIR+EERD I RHV+GVH+ A +RV +GD+D+PT+KK++ YC+ RC P LS EAGQ L S YV IRD VR+ L S ED + T+PITVRQLEALVRISESLAK+RL +EV EDV EA+RLF+ ST A + D NG G E+ RA+ FL+ R+ +GST ++ EEG+GQGY+ +VR +S + +RGE++ER++GR+LKR++
Sbjct: 423 MEQQTISIAKAGITTVLNSRSAVLAAANPVFGRYDDFKSASENIDLMTTILSRFDMIFLVRDIREEERDLMICRHVMGVHIPI-AENMMRVATTGQGDLDVPTMKKYIQYCKSRCKPTLSEEAGQVLTSSYVKIRDDVRKSILRSQGEDAQA-TIPITVRQLEALVRISESLAKLRLDSEVRIEDVNEALRLFRVSTMAANSTDQTNGMAGGAGGQSILSGAGANNREEFDRAQGFLRCRLAIGSTVNKQKLIEEGSGQGYNFMTMVRVLSAMAQRGEILERNQGRLLKRVK 712
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|676396623|ref|XP_009041589.1| (hypothetical protein AURANDRAFT_39241 [Aureococcus anophagefferens] >gi|323447825|gb|EGB03734.1| hypothetical protein AURANDRAFT_39241 [Aureococcus anophagefferens]) HSP 1 Score: 295.819 bits (756), Expect = 8.368e-92 Identity = 153/292 (52.40%), Postives = 208/292 (71.23%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPA----GIRVTQGA----EGD-IDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAA--DYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITTVLN+R SVLAAANP++GRYDDL+SAAENID+M+TILSRFD IFIVRDIRDE RD IA+HV+GVHM A+ + G+ G + D +D+ ++K+FV+YCR +C+PRL+ + L+SEYV IR+ V+ R ++ VP+TVRQLEALVR++ESLAKMRL+A V +DV EA+R+F+ ST A + G R +G ++ Q+ AE+FLK+R+P+G+ KT R+ EEG G+ AL RA+ ++ R E E ++G+ L+R+R
Sbjct: 424 MEQQTISIAKAGITTVLNSRTSVLAAANPVYGRYDDLRSAAENIDMMSTILSRFDCIFIVRDIRDESRDLSIAKHVMGVHMKASNASRSHRGVNTQPGCASAHDADTLDLKSLKEFVAYCRAKCSPRLNNQTSALLSSEYVAIREAVKSRGEQAGGRRHQAVPVTVRQLEALVRLAESLAKMRLQASVQPQDVHEALRIFKVSTMTAASTTPQTAGAELRFLGDDQRTQIQNAEQFLKQRVPVGADAKTIRLLEEGIALGHCDSALRRALKIMSNRAEFAELEKGKRLRRLR 715
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|676393057|ref|XP_009039806.1| (hypothetical protein AURANDRAFT_38450 [Aureococcus anophagefferens] >gi|323449536|gb|EGB05423.1| hypothetical protein AURANDRAFT_38450 [Aureococcus anophagefferens]) HSP 1 Score: 285.804 bits (730), Expect = 1.394e-89 Identity = 154/292 (52.74%), Postives = 206/292 (70.55%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIR----VTQGAEG-----DIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVA--LAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITTVLN+R SVLAAANPIFGRYDDL+S AENID+M+TILSRFD IFIVRDIRDE RD IA+HV+GVHM A+ A + VT G ++++ ++ ++S+CR RC+PRL E LASEYV IR +++R E+ VPIT+RQLEALVR++ESLAKMRL ++V DV EA+RLF+ ST A +A+ +G R + + Q+ AE+F+K+R+P+G+ T R+ EEG G+S AL RA++++ +R EL E +GR ++R+R
Sbjct: 274 MEQQTISIAKAGITTVLNSRTSVLAAANPIFGRYDDLRSTAENIDMMSTILSRFDCIFIVRDIRDESRDIFIAKHVMGVHMKASDSARVNDAPEVTAGQSSHEHLQNLELSMLRDYISFCRSRCSPRLDEETSALLASEYVLIRSAIKQRAEEAGGPRQLAVPITIRQLEALVRLAESLAKMRLNSKVDVADVYEALRLFKMSTMTAASVASPASGAEMRFLADDERAQIQNAEQFVKQRVPIGADASTMRLLEEGIVLGHSDFALRRALNIMNQRTELSELSQGRRVRRLR 565
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|568039635|gb|ETM37119.1| (hypothetical protein L914_16304, partial [Phytophthora parasitica]) HSP 1 Score: 268.47 bits (685), Expect = 1.553e-83 Identity = 147/285 (51.58%), Postives = 194/285 (68.07%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVT----QGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITT+LN+RASVLAAANP+FGRYDD++SA+ENIDLM+TILSRFD+IFIVRDI+D+ RDR +A HV+ +H NA A A + + + G+ + +KKF++YCR RCAPRLSV A Q L YVG+RD VRR G T+P+TVRQLEALVRI+ESLAKM L E T+E V+EAIRLF ST AA G GF E+ E+ + R + +G+ +TS + QGY+ A+ RAI ++++G L + + + + R++
Sbjct: 224 MEQQTISIAKAGITTILNSRASVLAAANPVFGRYDDMRSASENIDLMSTILSRFDMIFIVRDIQDDARDRQMAAHVVRMHTNALASAAGKPSASENASSGGEFEPWLLKKFITYCRTRCAPRLSVGAAQALQDFYVGVRDDVRR-----TQGGETTIPVTVRQLEALVRIAESLAKMHLLNEATREHVQEAIRLFSVST--MNAAKDGGTQGLFGGFH--EKAQEVEQSINRTLRIGTRVETSALYSRLEAQGYNPNAIQRAIRAMVQKGSLRQLSQYKFVSRVK 499
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|970665359|gb|KUG02041.1| (DNA replication licensing factor MCM5 [Phytophthora nicotianae]) HSP 1 Score: 267.7 bits (683), Expect = 5.482e-83 Identity = 147/285 (51.58%), Postives = 194/285 (68.07%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVT----QGAEGDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMGFERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITT+LN+RASVLAAANP+FGRYDD++SA+ENIDLM+TILSRFD+IFIVRDI+D+ RDR +A HV+ +H NA A A + + + G+ + +KKF++YCR RCAPRLSV A Q L YVG+RD VRR G T+P+TVRQLEALVRI+ESLAKM L E T+E V+EAIRLF ST AA G GF E+ E+ + R + +G+ +TS + QGY+ A+ RAI ++++G L + + + + R++
Sbjct: 252 MEQQTISIAKAGITTILNSRASVLAAANPVFGRYDDMRSASENIDLMSTILSRFDMIFIVRDIQDDARDRQMAAHVVRMHTNALASAAGKPSASENASSGGEFEPWLLKKFITYCRTRCAPRLSVGAAQALQDFYVGVRDDVRR-----TQGGETTIPVTVRQLEALVRIAESLAKMHLLNEATREHVQEAIRLFSVST--MNAAKDGGTQGLFGGFH--EKAQEVEQSINRTLRIGTRVETSALYSRLEAQGYNPNAIQRAIRAMVQKGSLRQLSQYKFVSRVK 527
BLAST of EWM24533.1 vs. NCBI_GenBank
Match: gi|953496621|emb|CEG42221.1| (dna replication licensing factor mcm5 [Plasmopara halstedii]) HSP 1 Score: 271.552 bits (693), Expect = 2.492e-82 Identity = 148/288 (51.39%), Postives = 200/288 (69.44%), Query Frame = 0
Query: 1 MEQQTISIAKAGITTVLNTRASVLAAANPIFGRYDDLKSAAENIDLMTTILSRFDLIFIVRDIRDEERDRGIARHVLGVHMNANAPAGIRVTQGAE-----GDIDMPTIKKFVSYCRQRCAPRLSVEAGQTLASEYVGIRDTVRRRTLESEDGNSPTVPITVRQLEALVRISESLAKMRLRAEVTQEDVREAIRLFQASTGVALAADYNGDPTRTMG--FERPEQVARAEEFLKRRIPLGSTTKTSRIQEEGTGQGYSHPALVRAISLLIRRGELMERDRGRVLKRIR 281
MEQQTISIAKAGITT+LN+RASVLAAANP+FGRYDD++SA+ENIDLM+TILSRFD+IFIVRDI+D+ RDR +A HV+ +H NA AP + T +E G+ + +KKF++YCR RCAP+LS EA Q+L YVG+RD VRR G T+P+TVRQLEALVRI+ESLAKM L+ E T+E VREAIRLF ST + A +G G E+ ++V E+ + R + +G+ +TS + QGY+ A+ RAI ++++G L + + + + R++
Sbjct: 465 MEQQTISIAKAGITTILNSRASVLAAANPVFGRYDDMRSASENIDLMSTILSRFDMIFIVRDIQDDARDRRMAAHVVRMHTNAVAPV-VENTHASENYSSGGEFEPWLLKKFITYCRTRCAPQLSAEAAQSLQDYYVGVRDDVRR-----TQGVETTIPVTVRQLEALVRIAESLAKMHLQNEATREHVREAIRLFSVST---MNAAKDGGTQGLFGGLHEKAQEV---EQSINRTLRIGTRVETSALYSRLEAQGYNPNAIQRAIRAMVQKGSLRQLSQYKFVSRVK 740 The following BLAST results are available for this feature:
BLAST of EWM24533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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