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Properties
| Property Name | Value |
|---|
| Product | RNA binding protein |
| Orig transcript id | gnl|cribi|Naga_100175g2.9487.mrna |
| Orig protein id | gnl|cribi|Naga_100175g2.9487 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:702884..705945 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6150 ID=rna6150|Name=rna6150|organism=Nannochloropsis gaditana|type=mRNA|length=605bp
AGGTATAAATTCATCCCTCTCTTTGTGTACGCACCCTGCAGAGACCTCTC
AAAAAGGGGGCCGAAATACGACGCTCCCTTAGTTGTACCATAAAGATGAT
GAGCGCTGCCCAGCAGCAAGCTCATGGGCAGCAGAATTCGCAGTATGTAG
GGCAGATGGACGGACAAAATTCCATGACCTTGGACGAGCCCGTCTGGCAG
ACCGTGAAAAGAGACTTGACACAAGTGGGCTCCAAGCTGCAGGTGGTGCT
CCTCCCAAGGGAAAACCAGGACGGGGTCCTGAAGAAGCTGAAAGACTGGG
ACCTCTGGGGCCCTCTCCTGGTCTGCCTGACGCTCTCCATCCTCTTGAGC
ATCACGGCCCCAGAGGAGCAGGGCGCCTTGGTCTTTGCCGCTGTCTTCTT
TGTCGTCTGGTTCGGCGCCGCCGTGGTCACCATGAACGCGCAGCTCTTGG
GAGGGACCATGTGCGTGCTGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGA
AGGAGGGAGCGTGGAGGGACTTGTCATGTCTGTCTTGGCTTGTTCCCAGG
CCCGCGTAGCGCCCGGTTCTATGATTCTTAGCCTCCCTCCCCCTTACCGC
CACCA back to topprotein sequence of rna6150 >rna6150-protein ID=rna6150-protein|Name=rna6150|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MGGGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANG
IFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGE
LFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPH
GVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASK
GDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFA
GLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDR
PIEVTAASKEEVLQLIELEKTGGVPPTAPVPGGGAGGGYGGGGGGSYSGG
RPAGGYGGGGYSGSTYGSGGGGGYGQASYGGSSYGGSSGYGGYGGDYQQS
SGSYYQGGYGSSGGGYGSSGGGYAGGYGRY back to topmRNA from alignment at CM002467.1:702884..705945+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6150 ID=rna6150|Name=rna6150|organism=Nannochloropsis gaditana|type=mRNA|length=3062bp|location=Sequence derived from alignment at CM002467.1:702884..705945+ (Nannochloropsis gaditana)
GCTCGCTGCATTGGTATCGGTGTGGTGCCGGTGGGAATGCTTGTTGGCCG
GTTGGCCGGGCTTTACGCAAGTCAGGAGTTCGGAGGACCAGCACTTTTGT
TCTATGTTTTCTTGATATCATCCTGCACTACCCTCACTCGTCCAGACACA
GGGCTTGCACGTCAACGGAAACTGCCACTGTGCTCTGTGTTTATACGTGT
GAGTTTACACGCACGCATCTAGGTGAAGCGAATGGCGACAAATTCGGCGT
CCGAGGACGTGCAGGTAAGCAGTTTGTGAGAAAAGCCTTCCCATCATCCT
AGTCAGATATCCCACGCCCTGGTCTCTTGTTGCGATGCACATTTCCGATT
CCTTCTTTGTTATCCCCTGATAGATCGAGACGACAAAGAAACGCacgcgt
gaggaggaggaacaggaagagCAGCAACCTCAGCGCGAGAACGGTGACAG
CACCGAGACTGCCAACGATACTATCCCTGCTGCCGAACCTCAGGGCACAG
ACGCCGGGACAGAAGAAACGGGCAGCAAGAAGGCAAAGGTTGATACTGGT
GTAGAAGACGCGACTGAGGGAGAGACACCCGAGGTGTTTGTGGCCCCCGG
TACCTTGATATTACGACTGTCGGGGCTGCCGTGGAAGTGCTCGGTGGCGG
ACGTGCAAAATTTCTTAAAGCACATCGGTGTGAGCACAAGACCCGACCCC
GCGGCGGACATCAAAATCTTGGACGATTCGAGCGGAGAAGCCTTGGTCCG
AGTGGGaagtgccgaggaggaagagacggcgTTGAAGCTGAAGGTGGGTC
GTCTGGGGAAACGTTTCGTGGACATTGGCAGCACCACCGAGGAGGCATTC
gaggccacgcccgccacctCGGAAGAAGCCATGAACGCACCCGCAACCGT
GGTGCCTGACGCGGCGACAGCcacgggcgaggcgggggacgGGACCGCCG
gcgaagcctcctccttgacggtCCCGGAATCGAGCGCGCCGCAGGGTGTA
GTCCGGATGCGGGGCTTGCCGTACAGCGCCACGGAGAAGGACATCCTCGC
CTTTTTTTCCGGCTTtggcgtggcggagggcggggtccacATGCACTACG
ACCATATGGGCCGGGCCTCGGGGCAGGCCTACGTGGTGTTTGAGACCGTG
CCCGAGGCCCAGCACGCCTTGAAgctcgacaaggagaagatcgGGGAGCG
GTGGATCGATttgttcctttcctccaagccGGAGATGCTCCACGCGGTCC
CCTCCATGCGCGGGTACGGCccgccgggaggggggggggagggatgggag
gagggggggggatccgACCAGGGCCCAAAGGGGTGAGCATTGGGGGTATC
TCCCATGTGATTCGCGTGCGTGGCCTGCCCTTCGACTGCACGCGGATGGA
CCTGCAGCATTTCTTCGCCTCGGTGGGCCCGACGGCCAATGGGATTTTTT
TCGTTCATCGCATGGACGGACGCTCGAGCGGGGAGGCCTTTGTGGTGCTG
CACAGTCAAGAGGCAGTGCGCCAGGCGCTAATGCAAGACAAGCAAAAAAT
GGGCTCGCGCTGGCTGGACATCTTCGAGTCCCACCCGGGGGAGCTGTTCT
CTCGCGTGGGCGCGGCGGCCGTGACGCTGGGCGCCAAGGATGACGTGGGC
TATGCAGGAGTGTTGAAAATGCGGGGGCTGCCCTTCCAAACCACCGTCCC
CGACGTTGCCACCTGGTTCGGCTCCTACCGCGTGGCGCCTCACGGGGTAT
TCATCACCATGGGCGCGGACGGACGGCCAACGGGGGAGGCCTACGTGATC
TTCGAGACGCCTGAGGACGCAGTCGCGGCCCGAGAAGCCTTGAACAAGCA
GACGATGAACAACCGTTGGATCGACTTGTATCTGGCTTCGAAGGGTGACG
TCTATACTTCCACGGTACATTCGCCCATCGTGGGGCAGGCCCATGGCGGG
TGCCCGGTGTACGCGAACACGCCCATGACCTGCGCGCGGCTCCGCGGTGT
TCCTTCCAcagtgacggaggaagagctctTTCGGTTTTTCGCCGGCTTGC
AGGTGATTGGGCTCTACATCTGTCGCGACTCCTCGGGGAGGGCCACGGGG
GAGGCTTACGCCGAGTTTGGGTCCTTGGACGACTGCCAGCAGGCCATGAG
CCGTAACCGAGACTAtatgcccggggggggggtcggagaTCGACCGATCG
AGGTCACGGCGGCGAGTAAGGAGGAAGTGTTGCAGTTGATCGAGCTGGAA
AAAACGGGTGGCGtgccccccacggccccggtcccggggggtggggccgg
gggagggtatggggggggagggggaggctcgTATTCGGGCGGGAGGCCTG
CAGGTGGCTACGGTGGGGGGGGATACTCCGGCTCGACATATGGatcgggt
ggggggggagggtatgGCCAAGCGTCTTACGGAGGGTCTTCGTACGGGGG
CTCGTCGGGATATGGCGGGTATGGCGGTGACTACCAGCAGAGCAGTGGGA
GCTATTACCAGGGCGGGTACGGCTCAAGTGGAGGCGGGTACGGCTCAAGT
GGAGGCGGGTACGCCGGGGGATATGGACGCTATTGAGTGAGGTGGTGTTT
GGTGGACCTTGGGTAAGGAGTGAGTGAAGTGTCGTGGGGGGTTGGCGGAC
ACGCGGCGGGAAACCGTTAATTCTGGAAAAATACGGACGTGTCGTGTGCT
TTTCCTTGCAGTAGGAGTGCgacgggagggcgtgggaagaCCCGGCCGGT
GCCAGTAGGAGTAGAGCTCTCCGGTGTTGGCAGACAAGGGCAGGGCacag
gggaaaagaagagacggAACAGGCGGAGGTCTGTGGTTGTGGAAGATGGA
TCGATGAGGTCGATCCATCTTCCTTTTGCGTTCCGTGTCTCATTTTGAAG
CTTGCAGAAATCCGCCAAATGGCACAGGCAATCGCAGAGAATATACGGGG
CATGAGGACGTACTACAGCCACTGTACACTGCCTACATCTCCGCGGTGCT
ACCTCCTACCTGACGTTCAGGCCTTCATCTCCCATGAAACATGAGGTTTT
CGCCCCGTCGCC back to topCoding sequence (CDS) from alignment at CM002467.1:702884..705945+ >rna6150 ID=rna6150|Name=rna6150|organism=Nannochloropsis gaditana|type=CDS|length=1293bp|location=Sequence derived from alignment at CM002467.1:702884..705945+ (Nannochloropsis gaditana)
atgggaggagggggggggatccgACCAGGGCCCAAAGGGGTGAGCATTGG
GGGTATCTCCCATGTGATTCGCGTGCGTGGCCTGCCCTTCGACTGCACGC
GGATGGACCTGCAGCATTTCTTCGCCTCGGTGGGCCCGACGGCCAATGGG
ATTTTTTTCGTTCATCGCATGGACGGACGCTCGAGCGGGGAGGCCTTTGT
GGTGCTGCACAGTCAAGAGGCAGTGCGCCAGGCGCTAATGCAAGACAAGC
AAAAAATGGGCTCGCGCTGGCTGGACATCTTCGAGTCCCACCCGGGGGAG
CTGTTCTCTCGCGTGGGCGCGGCGGCCGTGACGCTGGGCGCCAAGGATGA
CGTGGGCTATGCAGGAGTGTTGAAAATGCGGGGGCTGCCCTTCCAAACCA
CCGTCCCCGACGTTGCCACCTGGTTCGGCTCCTACCGCGTGGCGCCTCAC
GGGGTATTCATCACCATGGGCGCGGACGGACGGCCAACGGGGGAGGCCTA
CGTGATCTTCGAGACGCCTGAGGACGCAGTCGCGGCCCGAGAAGCCTTGA
ACAAGCAGACGATGAACAACCGTTGGATCGACTTGTATCTGGCTTCGAAG
GGTGACGTCTATACTTCCACGGTACATTCGCCCATCGTGGGGCAGGCCCA
TGGCGGGTGCCCGGTGTACGCGAACACGCCCATGACCTGCGCGCGGCTCC
GCGGTGTTCCTTCCAcagtgacggaggaagagctctTTCGGTTTTTCGCC
GGCTTGCAGGTGATTGGGCTCTACATCTGTCGCGACTCCTCGGGGAGGGC
CACGGGGGAGGCTTACGCCGAGTTTGGGTCCTTGGACGACTGCCAGCAGG
CCATGAGCCGTAACCGAGACTAtatgcccggggggggggtcggagaTCGA
CCGATCGAGGTCACGGCGGCGAGTAAGGAGGAAGTGTTGCAGTTGATCGA
GCTGGAAAAAACGGGTGGCGtgccccccacggccccggtcccggggggtg
gggccgggggagggtatggggggggagggggaggctcgTATTCGGGCGGG
AGGCCTGCAGGTGGCTACGGTGGGGGGGGATACTCCGGCTCGACATATGG
atcgggtggggggggagggtatgGCCAAGCGTCTTACGGAGGGTCTTCGT
ACGGGGGCTCGTCGGGATATGGCGGGTATGGCGGTGACTACCAGCAGAGC
AGTGGGAGCTATTACCAGGGCGGGTACGGCTCAAGTGGAGGCGGGTACGG
CTCAAGTGGAGGCGGGTACGCCGGGGGATATGGACGCTATTGA back to top
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