EWM24532.1, cds6135 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|585106040|gb|EWM24532.1| (RNA binding protein [Nannochloropsis gaditana]) HSP 1 Score: 851.277 bits (2198), Expect = 0.000e+0 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 Query: 1 MGGGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLIELEKTGGVPPTAPVPGGGAGGGYGGGGGGSYSGGRPAGGYGGGGYSGSTYGSGGGGGYGQASYGGSSYGGSSGYGGYGGDYQQSSGSYYQGGYGSSGGGYGSSGGGYAGGYGRY 430 MGGGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLIELEKTGGVPPTAPVPGGGAGGGYGGGGGGSYSGGRPAGGYGGGGYSGSTYGSGGGGGYGQASYGGSSYGGSSGYGGYGGDYQQSSGSYYQGGYGSSGGGYGSSGGGYAGGYGRY Sbjct: 1 MGGGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLIELEKTGGVPPTAPVPGGGAGGGYGGGGGGSYSGGRPAGGYGGGGYSGSTYGSGGGGGYGQASYGGSSYGGSSGYGGYGGDYQQSSGSYYQGGYGSSGGGYGSSGGGYAGGYGRY 430
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|553187532|ref|XP_005854630.1| (rna binding protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294428|gb|EKU21728.1| rna binding protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 269/270 (99.63%), Postives = 270/270 (100.00%), Query Frame = 0 Query: 39 HFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAS 308 HFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAA+ Sbjct: 303 HFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572 HSP 2 Score: 110.153 bits (274), Expect = 2.064e-22 Identity = 83/295 (28.14%), Postives = 139/295 (47.12%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREAL--NKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEV 312 V+R+RGLP+ T D+ FF+ G G+ + GR+SG+A+VV + + AL DK+K+G RW+D+F S E+ A +F S +G+F DGR +GEA+V+ + E A R+AL +KQ M +RW+D++ + G++++ + + A YA ++RG+P T ++ +F +V G++I + GR TGEAY F + +D A R+ + + +R I++ ASK +V Sbjct: 220 VVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLH-----------------------------------AHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQE---AVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVG-YAG----VLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAA----REALNKQTMNNRWIDLYLASKGDV 467 HSP 3 Score: 97.0561 bits (240), Expect = 4.496e-18 Identity = 83/307 (27.04%), Postives = 133/307 (43.32%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVG------PTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDI-------FESHPGELFSRVGAAAV---------------------TLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGL--QVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYM 292 ++R+ GLP+ C+ D+Q+F +G P A+ + +D SSGEA V + S E AL ++G R++DI FE+ P + A A +L + GV++MRGLP+ T D+ +F + VA GV + GR +G+AYV+FET +A A + L+K+ + RWIDL+L+SK P + AH FFA + G++ GR++GEA+ S + +QA+ +++ M Sbjct: 90 ILRLSGLPWKCSVADVQNFLKHIGVSTRPDPAAD----IKILDD-SSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALK-LDKEKIGERWIDLFLSSK----------PEMLHAH------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKM 350 HSP 4 Score: 75.8702 bits (185), Expect = 4.437e-11 Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 0 Query: 8 RPGPKGVSIG-----GISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQE---AVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYA------------GVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPED 175 R G V++G G + V+++RGLPF T D+ +F S +G+F DGR +GEA+V+ + E A R+AL +KQ M +RW+D++ + G++++ + + VG A ++RG+P T ++ +F +V G++I + GR TGEAY F + +D Sbjct: 368 RVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREAL--NKQTMNNRWIDLYLASKGDVYTSTVHSPI-------VGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDD 544
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|553188131|ref|XP_005854740.1| (rna binding protein [Nannochloropsis gaditana CCMP526] >gi|422294318|gb|EKU21618.1| rna binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 530.791 bits (1366), Expect = 0.000e+0 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0 Query: 35 MDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSR 287 MDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSR Sbjct: 1 MDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSR 253 HSP 2 Score: 75.485 bits (184), Expect = 1.466e-11 Identity = 56/188 (29.79%), Postives = 97/188 (51.60%), Query Frame = 0 Query: 8 RPGPKGVSIG-----GISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQE---AVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVT--------LGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAA 179 R G V++G G + V+++RGLPF T D+ +F S +G+F DGR +GEA+V+ + E A R+AL +KQ M +RW+D++ + G++++ + + + A + A ++RG+P T ++ +F +V G++I + GR TGEAY F + +D A Sbjct: 70 RVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREAL--NKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCA---RLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQA 250
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|298710505|emb|CBJ25569.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 283.878 bits (725), Expect = 1.703e-85 Identity = 148/337 (43.92%), Postives = 210/337 (62.31%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLIELEKTGG---------------------VPPTAPVPGGGAGG 337 V+R+RGLPF+ T+ ++ FF + + IF V R DG++SGEAFV+ ++ +AL++DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRGLPF + V ++ T+F Y+V HGVF+ G D RPTGE+YV+F++ ++A A +AL+KQ + +RWI+L+ ++KGD+YT+TV S ++G GG +Y PMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF ++DDCQ AMSRNR+ M DR +EV A SKE+VLQ I T GGG GG Sbjct: 249 VVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGA-MYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQIGASGTAANGGNRGGGYGGGGNGGGRGYGGGGGQVGGGGGGGG 578 HSP 2 Score: 168.703 bits (426), Expect = 1.697e-42 Identity = 106/311 (34.08%), Postives = 160/311 (51.45%), Query Frame = 0 Query: 12 KGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRV-------GAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMT----CARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASK 309 KG GG V+R+RGLP+ D+++FF + +GI DGR SGEA+VV ++EA ++AL +DK K+G RW+DIFE+ GE++S V+ D Y GV++MRGLPF+ T + +F V +FI DG+ +GEA+V+F T +A A +K+ + +RWIDL+ +KG +Y Q G A P R+RG+P EE+ FF G +V G+++ R TGE+Y F S D+ ++A + +GDR IE+ ++K Sbjct: 132 KGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDS-AYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKAL-LKDKEKLGDRWIDLFATNKGALY----------QRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFK----ALDKQKIGDRWIELFRSTK 426 HSP 3 Score: 157.532 bits (397), Expect = 1.823e-38 Identity = 95/295 (32.20%), Postives = 162/295 (54.92%), Query Frame = 0 Query: 20 SHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREAL--NKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMT-CARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASK 309 +H + +RGLP++ + +L FFA + I VH S GEA+V L ++ + AL +D+ +G R++++F S ++ V+ D GY GV++MRGLP+ D+ +F + G+ +T+ DGRP+GEAYV+FET E AA+EAL +K + RWID++ A+KG+VY+ T G G ++ T R+RG+P T+ ++ FF G+ V ++I G+A+GEA+ F + + ++A+ ++++ + GDR I++ A +K Sbjct: 45 THAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVH----NSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDV--EHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEE---AAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKL-----GDRWIDLFATNK 325
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|731325687|ref|XP_010673643.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein H [Beta vulgaris subsp. vulgaris] >gi|870863333|gb|KMT14497.1| hypothetical protein BVRB_4g072690 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 161.77 bits (408), Expect = 5.957e-42 Identity = 103/312 (33.01%), Postives = 168/312 (53.85%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRV--------------GAAAVTLGA-KDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAG--LQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316 V+R+RGLPFDCT D+Q F G I FVH+ GR SGEA+ VL V AL +++Q +G R++++F S E + + G+ A + K+ + + G+L++RGLPF D+ +F + +A + IT + GRP+GEA+V F PED+ A +K T+ +R+++L+ AS+ D+ + Q PV + ++RG+P + T+E++ FF G L ++I S GR TGEA+ EF S +D + AM ++R +G R IE+ A+S+E++ + + Sbjct: 70 VVRLRGLPFDCTEADVQEFLR--GLDLVDILFVHK-GGRFSGEAYCVLGYPMQVDFALQRNRQNIGRRYVEVFRSKRHEYYKAITNEVADASGVSPHRGSRAKSYDEGKELLEHTGILRLRGLPFSARREDIKKFFKDFVLADDVIHITYNSAGRPSGEAFVEFPGPEDSRGAM-VKDKMTLGSRYVELFPASREDMAEAIAKGRANSQDDLNEPVKHTGVL---KMRGLPFSATKEDIIEFFDGFVLSEDSIHITSMSDGRPTGEAFVEFASAEDSEAAMEKDR-----KTLGSRYIELFASSQEDLNEAL 369
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|922852462|gb|KOO21150.1| (epithelial splicing regulatory protein 2 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 166.777 bits (421), Expect = 3.147e-41 Identity = 134/431 (31.09%), Postives = 204/431 (47.33%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTA--NGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYA--------GVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREAL--NKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTC----ARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLIELEKTGGVPPTAPVPGGGAGGGYGGGGGGSYSGGRPAGGYG-GGGYSGSTYGSGGG---GGYGQASYGGSSYGGSSGYGGYGGDYQQSSGSYYQ--GGYGSSGGGYGSSGGGYAGGYGRY 430 V+R+RGLPF + D+ FF S PT + + + + DGRSSG+A+ V ++EA +AL DKQK+GSRW+D+F+S+ GEL+S + LG G V+K+RGLP+ T+ ++A + + GV + G +GRP+G AYV + ED +EAL +KQ++ R+ID++ S+ ++ G GG P + + T +LRG+P + E+++ FF L V+ + I + S + +G Y +F + +D QA+ R + + LQ + + + +SG GGY GGGY G+ Y G G SY G+ Y G G Y QS+G Y Q GGYG GGYG + G GYG + Sbjct: 789 VLRMRGLPFSTSPEDILVFFGS-PPTLQLSNVHLMRKADGRSSGDAYAVFDTEEAAVEALQYDKQKLGSRWVDLFQSNKGELYSLTSLGGIMLGQDAQAGSPVAALGDGYWVVKLRGLPWSVTLENIAIFLNGITIPKGGVHLMNGVNGRPSGLAYVELSSEED---QKEALCRDKQSIGGRYIDVFACSQTELQARLAG----GLERGGLPGNSGSSSTADAHFVKLRGLPYQINEQQISAFFQPLFVVAVQIAFNPSRQPSGFGYVQFRTPEDTTQALHR--------------------TNQAALQTLAMRQ-------------------------HHSGYTQQGGYASGGGYHGAEYAVANGALSAANGNGSYAAGYGSGADVYSGTAGGYGQSTGGYAQGSGGYGQVAGGYGPTAGSGGAGYGTH 1166 HSP 2 Score: 147.517 bits (371), Expect = 1.158e-34 Identity = 107/337 (31.75%), Postives = 179/337 (53.12%), Query Frame = 0 Query: 21 HVIRVRGLPFDCTRMDLQHFFASVGPTAN--GIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGS-YRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTST-VHSPIVGQ-AHGGCPVYANTP-MTCARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLIELEKTGGVPPTAPVPGGGAGGGYGGGGGGSYSG 349 H+ R+RGLP++ ++ F ++V + +H ++GEAFV L + + + L + Q++G R+++IF S+ E + T+ +DD Y GVL+MRGLPF T+ D+ +FGS + V + ADGR +G+AY +F+T E AV A + +KQ + +RW+DL+ ++KG++Y+ T + ++GQ A G PV A +LRG+P +VT E + F G+ + G+++ +GR +G AY E S +D ++A+ R++ +G R I+V A S+ E+ A + GG GG G G S + Sbjct: 691 HIARLRGLPWNYGIKEVCEFLSNVNVNLQPAAVTMLHN----AAGEAFVTLSTAAQLGEVLQANHQEIGRRYVEIFTSNSEEKQAACERNRATM--RDDADYRGVLRMRGLPFSTSPEDILVFFGSPPTLQLSNVHLMRKADGRSSGDAYAVFDTEEAAVEALQ-YDKQKLGSRWVDLFQSNKGELYSLTSLGGIMLGQDAQAGSPVAALGDGYWVVKLRGLPWSVTLENIAIFLNGITIPKGGVHLMNGVNGRPSGLAYVELSSEEDQKEALCRDKQ-----SIGGRYIDVFACSQTEL--------------QARLAGGLERGGLPGNSGSSSTA 1001
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|902221772|gb|KNA19007.1| (hypothetical protein SOVF_065660 [Spinacia oleracea]) HSP 1 Score: 158.303 bits (399), Expect = 1.124e-40 Identity = 101/312 (32.37%), Postives = 166/312 (53.21%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFS--------------RVGAAAVTLGA-KDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVI--GLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316 V+R+RGLPFDCT D+Q F G I FVH+ GR SGEAF VL V AL +++Q +G R++++F + + R G+ A + K+ + + G+L++RGLPF D+ +F + +A + + IT + GRP+GEA+V F PED+ AA +K T+ +R+++L+ A + ++ + Q PV + +LRG+P + T+EE+ FF G + ++I GR TGEA+ EF +D + AM ++R +G R IE+ A+S+E++ + + Sbjct: 77 VVRLRGLPFDCTEADVQEFLR--GLDLVDILFVHK-GGRFSGEAFCVLGYPMQVDFALQRNRQNVGRRYVEVFRGKRHDYYKAIANEVSDASGVSPRRGSRAKSHDEGKEQLEHTGILRLRGLPFSARREDIKNFFKDFVLADNVIHITYNSAGRPSGEAFVEFPGPEDSRAAM-VKDKMTLGSRYVELFPAFREEMDEAIAKGRANSQDDLNEPVKHTGVL---KLRGLPFSATKEEIIEFFNGFVLTEDSVHITSMPDGRPTGEAFVEFAGPEDSEAAMEKDR-----KSLGSRYIELFASSQEDLSEAL 376
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|661876690|emb|CDP19319.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 157.147 bits (396), Expect = 2.566e-40 Identity = 97/309 (31.39%), Postives = 168/309 (54.37%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAA-----------AVTLGA-----KDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAG--LQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEV 312 V+R+RGLPFDCT D+ FF ++ + FVH+ G+ +GEAF VL V AL +++Q +G R++++F S E + + AV KD + G L+MRGLPF + D+ +F + ++ + IT +DGRPTGEAYV F +PED+ AA + ++ T+ +R+I+L+ +S+ ++ + ++ ++ G + P R+RG+P + ++++ FF L +++ + GR TGEA+ EF S +D + A++++R +G R IE+ +S EE+ Sbjct: 63 VVRLRGLPFDCTEADIAEFFHNLD--VIDVLFVHK-GGKFTGEAFSVLGYPLQVDFALQRNRQNIGRRYVEVFRSRKDEYYKAIANEVSDARGGSPRRAVPRARSFDEGKDLAEHTGFLRMRGLPFSASKEDIIDFFKDFVLSEEKISITATSDGRPTGEAYVEFASPEDSRAAM-SRDRMTLGSRYIELFPSSREELDEAISRGGLLPKSADGKDL--TVPTGVLRMRGLPFSAGKDDIMEFFKDFVLSEDSIHVTFNFEGRPTGEAFVEFASPEDAKAALAKDR-----MTLGSRYIELFPSSLEEL 360
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|747085153|ref|XP_011090021.1| (RNA-binding protein sym-2 isoform X1 [Sesamum indicum]) HSP 1 Score: 155.992 bits (393), Expect = 5.095e-40 Identity = 95/310 (30.65%), Postives = 167/310 (53.87%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGA---------------KDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMN--NRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAG--LQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEV 312 V+R+RGLPFDC ++ FF G I FVH+ G+ +GEA+ VL + AL +++Q +G R++++F S E + + + A +D + GVL++RGLPF + ++ +F + ++ V + ++GRP GEA+V F TPED +R+A++K M R+I+L+ AS+ ++ + ++ ++ G A P T R+RG+P + ++++ FF L ++I + GR TGEA+ EF S +D ++A++++R +G R IE+ A+S EE+ Sbjct: 58 VVRLRGLPFDCAEAEIVDFFH--GLDVVDILFVHK-GGKPTGEAYCVLGYPLQIDFALQRNRQNIGRRYVEVFRSRKDEYYKAIANEILEAPAGSPRRAASRARSSAERDLSEFKGVLRLRGLPFSASKEEIINFFKDFALSEDKVHLIANSEGRPAGEAFVEFATPED---SRDAMSKDRMTLGYRYIELFPASREELEEAASRGRLMPKSFEGKD--ATEPTTVLRMRGLPFSAGKDDIIDFFKNFTLSEESIHITYNFEGRPTGEAFVEFASAEDAKEALAKDR-----MTLGSRYIELFASSPEEL 354
BLAST of EWM24532.1 vs. NCBI_GenBank
Match: gi|747085155|ref|XP_011090022.1| (RNA-binding protein sym-2 isoform X2 [Sesamum indicum]) HSP 1 Score: 155.992 bits (393), Expect = 5.508e-40 Identity = 95/310 (30.65%), Postives = 167/310 (53.87%), Query Frame = 0 Query: 22 VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGA---------------KDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMN--NRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAG--LQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEV 312 V+R+RGLPFDC ++ FF G I FVH+ G+ +GEA+ VL + AL +++Q +G R++++F S E + + + A +D + GVL++RGLPF + ++ +F + ++ V + ++GRP GEA+V F TPED +R+A++K M R+I+L+ AS+ ++ + ++ ++ G A P T R+RG+P + ++++ FF L ++I + GR TGEA+ EF S +D ++A++++R +G R IE+ A+S EE+ Sbjct: 55 VVRLRGLPFDCAEAEIVDFFH--GLDVVDILFVHK-GGKPTGEAYCVLGYPLQIDFALQRNRQNIGRRYVEVFRSRKDEYYKAIANEILEAPAGSPRRAASRARSSAERDLSEFKGVLRLRGLPFSASKEEIINFFKDFALSEDKVHLIANSEGRPAGEAFVEFATPED---SRDAMSKDRMTLGYRYIELFPASREELEEAASRGRLMPKSFEGKD--ATEPTTVLRMRGLPFSAGKDDIIDFFKNFTLSEESIHITYNFEGRPTGEAFVEFASAEDAKEALAKDR-----MTLGSRYIELFASSPEEL 351 The following BLAST results are available for this feature:
BLAST of EWM24532.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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