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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100260g2.1403.mrna |
| Orig protein id | gnl|cribi|Naga_100260g2.1403 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:696467..698343 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6147 ID=rna6147|Name=rna6147|organism=Nannochloropsis gaditana|type=mRNA|length=1347bp
CGGCGATACCCTGACGTGCCTATACCTCCCTCTGAAACACGCATCTCCAG
TGTTCGAGTGAGAGGGGCTCGAACAGGCTTGACTGGTGTAAAGGTGATGA
CTCCAGTGCAGTGCGTGTGAGTCGATACATCAGGCATCGGACAAGGGGCA
ATGCCGATCGTGACGGGATCGGAGCCAGCTACTAAGAGGAGCTGCCAGTC
GTCCTACAGAAACTCCCAATGCTCAGTATTGGCGCAATGTGCATCTAATC
CTCCTCCTTTGTTTCATGACCTTCCTAGATCTCCTCATCAGAAATCTTCT
GCCACTGATTCCACTGTCAGATCTCTAGGGCCTAGAGAGAGCAGGACCAA
AGCTACTTGTGCGTGGGAGAGGACGGTAGGCCCCAAGCTAGGATAAAATC
TTATCTAATTCTGTGCATCATGGGGGGAGATGGCGCTCTTGACCCTGCAC
ACACCGCAACGCTTTCTCCTGAGAGGGTTCTGGCCGCTTATGACGCGTCT
GGGGATTATCTTGAGGCCCAAGAAAAGCTCAGAGTCTACTTGAAGCGAGC
CTTCCTCCTTGTGTCCCGGGCTAGAATGCGTCCCACTTCAGGTGGCGTAT
TGGAAAGTAGTTTCATTCGAGAGGATATCGGGGCTGCACGACGTGTGCAT
GGAGAACGGCTTGTCTTCGCGAAGTGTGGGTCGCACCCGAGCGATGTGGG
CGGTGTGGACCCCCCACCAACGAGGATGGAAGATCTCCTCGTGATATTAG
CCGGTGCACTTCCGTCCCCAGAGGTCCGAGAAGCACAGAAAGACTTTGTA
AAGGCGTTGGACTGTGTCATGGATTTGGCCGTCGCGGCGAAGGCGATCTG
GAGGACGCAAACGTGCGACACAGATGAGAAGCACGACGATGTATAGCGTA
AAATAATCACCCAACGCAAGTCAAGTAGAGCGTCACGCGCCTTCACGTGG
GCGGGGCCCTTACATTACGTCAATGCATTCCGTGTTTACTATCAAAACCG
CCCCGACTCGATCAATGTACACGTATCAACACAGTCTTCATGACTCTCAC
GCCCCCGGGATTGTTCCCATGGCCGTCCACTGGGCGGGAAAACAGGAGAC
GATCCCCGGGGAAGCGAGCAGGACCACACAAAGCCTCCAGCGACAGACCC
ACGCGCCCCCCTCTCTCTCTGTACACCACGATCCTCCCTCCTTCCCTCCC
TCCCTCCTTCCCTCCCTCCCTCCCTCCGCCCCCTCCTACGCCCGTTCCTC
GGACCCTTCCATCCCCTCCACCGTCAGAATCGCAGCTCCACATGCAAGTT
CAAGTCGCCTGGATCTAACGGCTGTCCTGTCACCGGATGCAACGAGA back to topprotein sequence of rna6147 >rna6147-protein ID=rna6147-protein|Name=rna6147|organism=Nannochloropsis gaditana|type=polypeptide|length=345bp
MRVTAQLVRPFTYCIHKRASGVLRGSGRRFASGCTPITETSTARMESLTR
IVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLD
GIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGAR
LLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFR
TQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYR
DFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELE
VYLQRLIRMPKASHNPDLLRFFSLHPVTGQPLDPGDLNLHVELRF back to topmRNA from alignment at CM002467.1:696467..698343- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6147 ID=rna6147|Name=rna6147|organism=Nannochloropsis gaditana|type=mRNA|length=1877bp|location=Sequence derived from alignment at CM002467.1:696467..698343- (Nannochloropsis gaditana)
ATGCGTGTGTGTCGTGGTTTTGCGGAGGCGAATACCTGTCTCCTTGGCCA
AGTCTGAAGTGCTCTCCACCTCCCTCTCTTGGAACATGACTTCTGATACG
ACTATTCCCCCTCACATCTCCATGCCACATCAAGGACTGCGCAACTTGTG
AGGCCCTTCACATACTGTATACATAAGAGAGCGAGTGGCGTCCTTCGTGG
AAGCGGGAGGAGATTTGCGAGCGGGTGTACGCCTATTACTGAGACAAGCA
CCGCGAGGATGGAAAGCCTCACCCGGATTGTTACAAATACCCTCAGAAAC
CCAGGAGGAGTCACGAAACTGTGGTCTTTTTCTTTGGCCGATCCCTCTCA
AGGAAGACGGGAACGACCACATAAGGTAAGCGGGTTGAAAGGAAGGAATG
CTGGTGTTGGAGGACGAGCAAGCAGTAGGGAGAAAACCATATTGTCGCTT
CACCTGTGCCGACGCGCGCAAGGAAGAGGTGCATCGCCACACGAATCAAC
GCGCGGCCCTGAGAAACGGAATACGAGTTCAATTGACATTATCTTAGGCC
ACGAGAAGCTTCCTTTGCTTGTTAAAGGACGTCGCTCCTACTCCCTCATC
TTCCCATCCCTTCCCTTCCCCTCCCCTAGCTCGTCCTCCGCCACAACAAA
CTCTCGGGGACGCGCTTCGTGGTCTTGGACGGCATTGAGGTGCCCGGCAC
CCGGGGCACGACTTCCCTATTGAACGCAGTGGAGATATTGTTCAAGGTCG
ATGACGCTACCGCCACCGTGAGCATTACCCCAGACCTGGGTGCGGGCGGG
TTTATATATAGGTAAGGAGCAGGGGCTTGAAGATACGAAACAAATGTCGG
ACCAGCCACTGACCTTCCTCCCTACCATCCACCCTTCCTCCCTTCCTCCC
TCCCTCCCTCCCTCCTTCCCCCCCTTCCCACAGCTGTCGCGTGGGAGCTC
GACTCTTGACCGAGCAGGCGGATGTATTGGAGGTCTCCGACATGGGTAGC
AGTCTCCCGCACATGGAGGACGTGGGCGGTGCCGCCAATGGGAGCGGTAA
CGGTCACGAGGCAGGGCGGGTGCCTGTGCGCGTGATGGTCCCGGAGTTCC
GGACGCAATCCAGCGAAGGGAAGCTCATTGTGCATTACAAGGTGGTTTGC
ACCCTTTCAGGGGCGGGGCGGGCGGGCGGGAAGGAGGGAGGGAGGGAGGG
AGGGGAGGAGGGAGGGAAGGAGGGAGAGGTGGTGGTGTTCCGCAGGTACC
GGGACTTTGATAAGCTGGATCGACTCGTGCGCTCCGCCTTCGCGGGCTCC
CACCTGTTGAGCAGCCTTCCCTCCCTCCCCATCAAGGTCCTGAACCCCTT
TGCCGATCAGTCCGACCCGCTCTTTATCGAACATCGCCGTCAGGAGTTGG
AGGTCTACCTCCAGCGGTTGATACGTATGCCCAAGGCCTCCCATAACCCA
GATTTGCTCCGATTTTTCTCGTTGCATCCGGTGACAGGACAGCCGTTAGA
TCCAGGCGACTTGAACTTGCATGTGGAGCTGCGATTCTGACGGTGGAGGG
GATGGAAGGGTCCGAGGAACGGGCGTAGGAGGGGGCGGAGGGAGGGAGGG
AGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGATCGTGGTGTACAGAGAGA
GAGGGGGGCGCGTGGGTCTGTCGCTGGAGGCTTTGTGTGGTCCTGCTCGC
TTCCCCGGGGATCGTCTCCTGTTTTCCCGCCCAGTGGACGGCCATGGGAA
CAATCCCGGGGGCGTGAGAGTCATGAAGACTGTGTTGATACGTGTACATT
GATCGAGTCGGGGCGGTTTTGATAGTAAACACGGAATGCATTGACGTAAT
GTAAGGGCCCCGCCCACGTGAAGGCGC back to topCoding sequence (CDS) from alignment at CM002467.1:696467..698343- >rna6147 ID=rna6147|Name=rna6147|organism=Nannochloropsis gaditana|type=CDS|length=4152bp|location=Sequence derived from alignment at CM002467.1:696467..698343- (Nannochloropsis gaditana)
CTGTCGCGTGGGAGCTCGACTCTTGACCGAGCAGGCGGATGTATTGGAGG
TCTCCGACATGGGTAGCAGTCTCCCGCACATGGAGGACGTGGGCGGTGCC
GCCAATGGGAGCGGTAACGGTCACGAGGCAGGGCGGGTGCCTGTGCGCGT
GATGGTCCCGGAGTTCCGGACGCAATCCAGCGAAGGGAAGCTCATTGTGC
ATTACAAGGTGGTTTGCACCCTTTCAGGGGCGGGGCGGGCGGGCGGGAAG
GAGGGAGGGAGGGAGGGAGGGGAGGAGGGAGGGAAGGAGGGAGAGGTGGT
GGTGTTCCGCAGGTACCGGGACTTTGATAAGCTGGATCGACTCGTGCGCT
CCGCCTTCGCGGGCTCCCACCTGTTGAGCAGCCTTCCCTCCCTCCCCATC
AAGGTCCTGAACCCCTTTGCCGATCAGTCCGACCCGCTCTTTATCGAACA
TCGCCGTCAGGAGTTGGAGGTCTACCTCCAGCGGTTGATACGTATGCCCA
AGGCCTCCCATAACCCAGATTTGCTCCGATTTTTCTCGTTGCATCCGGTG
ACAGGACAGCCGTTAGATCCAGGCGACTTGAACTTGCATGTGGAGCTGCG
ATTCTGACTCGTCCTCCGCCACAACAAACTCTCGGGGACGCGCTTCGTGG
TCTTGGACGGCATTGAGGTGCCCGGCACCCGGGGCACGACTTCCCTATTG
AACGCAGTGGAGATATTGTTCAAGGTCGATGACGCTACCGCCACCGTGAG
CATTACCCCAGACCTGGGTGCGGGCGGGTTTATATATAGGACTGCGCAAC
TTGTGAGGCCCTTCACATACTGTATACATAAGAGAGCGAGTGGCGTCCTT
CGTGGAAGCGGGAGGAGATTTGCGAGCGGGTGTACGCCTATTACTGAGAC
AAGCACCGCGAGGATGGAAAGCCTCACCCGGATTGTTACAAATACCCTCA
GAAACCCAGGAGGAGTCACGAAACTGTGGTCTTTTTCTTTGGCCGATCCC
TCTCAAGGAAGACGGGAACGACCACATAAGATGCGTGTCTGTCGCGTGGG
AGCTCGACTCTTGACCGAGCAGGCGGATGTATTGGAGGTCTCCGACATGG
GTAGCAGTCTCCCGCACATGGAGGACGTGGGCGGTGCCGCCAATGGGAGC
GGTAACGGTCACGAGGCAGGGCGGGTGCCTGTGCGCGTGATGGTCCCGGA
GTTCCGGACGCAATCCAGCGAAGGGAAGCTCATTGTGCATTACAAGGTGG
TTTGCACCCTTTCAGGGGCGGGGCGGGCGGGCGGGAAGGAGGGAGGGAGG
GAGGGAGGGGAGGAGGGAGGGAAGGAGGGAGAGGTGGTGGTGTTCCGCAG
GTACCGGGACTTTGATAAGCTGGATCGACTCGTGCGCTCCGCCTTCGCGG
GCTCCCACCTGTTGAGCAGCCTTCCCTCCCTCCCCATCAAGGTCCTGAAC
CCCTTTGCCGATCAGTCCGACCCGCTCTTTATCGAACATCGCCGTCAGGA
GTTGGAGGTCTACCTCCAGCGGTTGATACGTATGCCCAAGGCCTCCCATA
ACCCAGATTTGCTCCGATTTTTCTCGTTGCATCCGGTGACAGGACAGCCG
TTAGATCCAGGCGACTTGAACTTGCATGTGGAGCTGCGATTCTGACTCGT
CCTCCGCCACAACAAACTCTCGGGGACGCGCTTCGTGGTCTTGGACGGCA
TTGAGGTGCCCGGCACCCGGGGCACGACTTCCCTATTGAACGCAGTGGAG
ATATTGTTCAAGGTCGATGACGCTACCGCCACCGTGAGCATTACCCCAGA
CCTGGGTGCGGGCGGGTTTATATATAGGACTGCGCAACTTGTGAGGCCCT
TCACATACTGTATACATAAGAGAGCGAGTGGCGTCCTTCGTGGAAGCGGG
AGGAGATTTGCGAGCGGGTGTACGCCTATTACTGAGACAAGCACCGCGAG
GATGGAAAGCCTCACCCGGATTGTTACAAATACCCTCAGAAACCCAGGAG
GAGTCACGAAACTGTGGTCTTTTTCTTTGGCCGATCCCTCTCAAGGAAGA
CGGGAACGACCACATAAGATGCGTGTCTGTCGCGTGGGAGCTCGACTCTT
GACCGAGCAGGCGGATGTATTGGAGGTCTCCGACATGGGTAGCAGTCTCC
CGCACATGGAGGACGTGGGCGGTGCCGCCAATGGGAGCGGTAACGGTCAC
GAGGCAGGGCGGGTGCCTGTGCGCGTGATGGTCCCGGAGTTCCGGACGCA
ATCCAGCGAAGGGAAGCTCATTGTGCATTACAAGGTGGTTTGCACCCTTT
CAGGGGCGGGGCGGGCGGGCGGGAAGGAGGGAGGGAGGGAGGGAGGGGAG
GAGGGAGGGAAGGAGGGAGAGGTGGTGGTGTTCCGCAGGTACCGGGACTT
TGATAAGCTGGATCGACTCGTGCGCTCCGCCTTCGCGGGCTCCCACCTGT
TGAGCAGCCTTCCCTCCCTCCCCATCAAGGTCCTGAACCCCTTTGCCGAT
CAGTCCGACCCGCTCTTTATCGAACATCGCCGTCAGGAGTTGGAGGTCTA
CCTCCAGCGGTTGATACGTATGCCCAAGGCCTCCCATAACCCAGATTTGC
TCCGATTTTTCTCGTTGCATCCGGTGACAGGACAGCCGTTAGATCCAGGC
GACTTGAACTTGCATGTGGAGCTGCGATTCTGACTCGTCCTCCGCCACAA
CAAACTCTCGGGGACGCGCTTCGTGGTCTTGGACGGCATTGAGGTGCCCG
GCACCCGGGGCACGACTTCCCTATTGAACGCAGTGGAGATATTGTTCAAG
GTCGATGACGCTACCGCCACCGTGAGCATTACCCCAGACCTGGGTGCGGG
CGGGTTTATATATAGGACTGCGCAACTTGTGAGGCCCTTCACATACTGTA
TACATAAGAGAGCGAGTGGCGTCCTTCGTGGAAGCGGGAGGAGATTTGCG
AGCGGGTGTACGCCTATTACTGAGACAAGCACCGCGAGGATGGAAAGCCT
CACCCGGATTGTTACAAATACCCTCAGAAACCCAGGAGGAGTCACGAAAC
TGTGGTCTTTTTCTTTGGCCGATCCCTCTCAAGGAAGACGGGAACGACCA
CATAAGATGCGTGTCTGTCGCGTGGGAGCTCGACTCTTGACCGAGCAGGC
GGATGTATTGGAGGTCTCCGACATGGGTAGCAGTCTCCCGCACATGGAGG
ACGTGGGCGGTGCCGCCAATGGGAGCGGTAACGGTCACGAGGCAGGGCGG
GTGCCTGTGCGCGTGATGGTCCCGGAGTTCCGGACGCAATCCAGCGAAGG
GAAGCTCATTGTGCATTACAAGGTGGTTTGCACCCTTTCAGGGGCGGGGC
GGGCGGGCGGGAAGGAGGGAGGGAGGGAGGGAGGGGAGGAGGGAGGGAAG
GAGGGAGAGGTGGTGGTGTTCCGCAGGTACCGGGACTTTGATAAGCTGGA
TCGACTCGTGCGCTCCGCCTTCGCGGGCTCCCACCTGTTGAGCAGCCTTC
CCTCCCTCCCCATCAAGGTCCTGAACCCCTTTGCCGATCAGTCCGACCCG
CTCTTTATCGAACATCGCCGTCAGGAGTTGGAGGTCTACCTCCAGCGGTT
GATACGTATGCCCAAGGCCTCCCATAACCCAGATTTGCTCCGATTTTTCT
CGTTGCATCCGGTGACAGGACAGCCGTTAGATCCAGGCGACTTGAACTTG
CATGTGGAGCTGCGATTCTGACTCGTCCTCCGCCACAACAAACTCTCGGG
GACGCGCTTCGTGGTCTTGGACGGCATTGAGGTGCCCGGCACCCGGGGCA
CGACTTCCCTATTGAACGCAGTGGAGATATTGTTCAAGGTCGATGACGCT
ACCGCCACCGTGAGCATTACCCCAGACCTGGGTGCGGGCGGGTTTATATA
TAGGACTGCGCAACTTGTGAGGCCCTTCACATACTGTATACATAAGAGAG
CGAGTGGCGTCCTTCGTGGAAGCGGGAGGAGATTTGCGAGCGGGTGTACG
CCTATTACTGAGACAAGCACCGCGAGGATGGAAAGCCTCACCCGGATTGT
TACAAATACCCTCAGAAACCCAGGAGGAGTCACGAAACTGTGGTCTTTTT
CTTTGGCCGATCCCTCTCAAGGAAGACGGGAACGACCACATAAGATGCGT
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