EWM24547.1, cds6132 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|585106056|gb|EWM24547.1| (hypothetical protein Naga_100260g2 [Nannochloropsis gaditana]) HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0 Query: 1 MRVTAQLVRPFTYCIHKRASGVLRGSGRRFASGCTPITETSTARMESLTRIVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRFFSLHPVTGQPLDPGDLNLHVELRF 345 MRVTAQLVRPFTYCIHKRASGVLRGSGRRFASGCTPITETSTARMESLTRIVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRFFSLHPVTGQPLDPGDLNLHVELRF Sbjct: 1 MRVTAQLVRPFTYCIHKRASGVLRGSGRRFASGCTPITETSTARMESLTRIVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRFFSLHPVTGQPLDPGDLNLHVELRF 345
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|553187541|ref|XP_005854633.1| (hypothetical protein NGA_0169700 [Nannochloropsis gaditana CCMP526] >gi|422294431|gb|EKU21731.1| hypothetical protein NGA_0169700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 334.339 bits (856), Expect = 5.798e-113 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 Query: 45 MESLTRIVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIV 210 MESLTRIVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIV Sbjct: 1 MESLTRIVTNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIV 166
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|299473012|emb|CBN79878.1| (hypothetical protein Esi_0538_0008 [Ectocarpus siliculosus]) HSP 1 Score: 117.857 bits (294), Expect = 4.132e-27 Identity = 94/283 (33.22%), Postives = 129/283 (45.58%), Query Frame = 0 Query: 60 GGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSG--TRFVVLDGIEVPGTR-----GTTSLLNAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEG---EVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRFFSLHPVTGQPL 332 G + + W L DPS+GRRE HK+ LRH L+G +R V +DGI V G G SL V + +V V G + YSC + G +P + D G G V + + P + G + ++VV TL G R GG G+ G VV+RR+ F L V + GSHLL SLP LP K +NP +Q F+E RR+ L+ YL+RL+ +PKA + +L+ F LHP+TG PL Sbjct: 10 GPMVRTWHMRLPDPSRGRREEVHKVQLRHFPLTGHSSRSVTVDGIAVQGAESAPPPGGGSLKKTVTLKVRVGSHDCWVGYRASARPGRYFYSCIID----------------GVVMPELNDTVGDTGDDEGVPLPGEVFIDSIEP---AKDRFGTEFLEFRVV-TLRGTRRRDSCGGGGGAGKAVDGGGGCYHAVVWRRFSAFRSLHSDVTAMLWGSHLLDSLPPLPAKCINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMGFLGLHPITGYPL 272
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|553180403|ref|XP_005853399.1| (px domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422295662|gb|EKU22961.1| px domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 82.4185 bits (202), Expect = 3.541e-14 Identity = 51/122 (41.80%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 212 YKVVCTLSGAGRAGGKEGGREG--GEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRFFSLHPVTGQP 331 + + T A G E G +G G G KE E R+RDFDKLD +RS F G HL SSLP LP K L + P F+E RR L+ Y+QRL P NPD F V G+P Sbjct: 189 FYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRF--RFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAF-----VLGEP 303
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|585101340|gb|EWM21227.1| (px domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 82.4185 bits (202), Expect = 3.940e-14 Identity = 51/122 (41.80%), Postives = 61/122 (50.00%), Query Frame = 0 Query: 212 YKVVCTLSGAGRAGGKEGGREG--GEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRFFSLHPVTGQP 331 + + T A G E G +G G G KE E R+RDFDKLD +RS F G HL SSLP LP K L + P F+E RR L+ Y+QRL P NPD F V G+P Sbjct: 194 FYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRF--RFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAF-----VLGEP 308
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|676389375|ref|XP_009037966.1| (expressed protein [Aureococcus anophagefferens] >gi|323451462|gb|EGB07339.1| expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 81.2629 bits (199), Expect = 4.913e-14 Identity = 76/276 (27.54%), Postives = 112/276 (40.58%), Query Frame = 0 Query: 62 VTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLL-------NAVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHM-EDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRF--FSLHPV 327 V ++W D GRRE + L HN LSG V I PG+ + I F V VSI P A GF Y + E ++ + S P M DV S H V+ T+ + ++ + T G RE + +R+ +F V+ A+AGSHL S++P+ P K LNPF +Q DP F+E+RR EL + ++++ +P+ NP LL F +L P+ Sbjct: 2 VARVWLQPFVDAQNGRRETLCVVYLEHNNLSGA---VSLQIRAPGSEVVVDGGVGRVVVGKSATIPFSVAACVGRVSILPK--ATGFDYLLNWAGNGVAE----VQQRTIESLEPLMPRDVTVEVGPSVECHSGKSFYKLVVSANGETREPASCIRDDFRGILTGKTINVVTDARGRRE------------LTKRFSEFQDCYERVKDAYAGSHLRSNVPAPPKKCLNPFQNQLDPDFVENRRVELNDFAKKMVVLPRVLVNPALLDFLGLALQPI 256
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|676389975|ref|XP_009038266.1| (hypothetical protein AURANDRAFT_71905 [Aureococcus anophagefferens] >gi|323451151|gb|EGB07029.1| hypothetical protein AURANDRAFT_71905 [Aureococcus anophagefferens]) HSP 1 Score: 80.4925 bits (197), Expect = 7.107e-13 Identity = 70/259 (27.03%), Postives = 106/259 (40.93%), Query Frame = 0 Query: 60 GGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLN--AVEILFKVDDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNP 316 G V + W F H++ L H+ L+G R ++D E+ G+ GT+S+ + I F + I GF Y+C AD + V + S+ G A SG V V R +S IV Y + S +G + V RR+RDF LD + A AG H+ +S+P LP+K L F D +D F+E RR++L+ Y+ +L+ +P P Sbjct: 7 GEVNRTWRFCDGGGQH------HEVSLYHHPLTGARAALVDHEELEGSLGTSSVFHGSTTTIPFACGGCRGAIHIQRS-AFFGFSYAC---------SADGVSVPEATSATADPRRAPGHAGRSGPALRVNSCRVLAHVTT-RDHASPSAPIVWYLIETHAS----------------KGDEVATTRVHRRFRDFADLDEAITGALAGHHVRNSVPRLPLKKLKLFQDHNDAAFLEARRRDLDGYVAKLVHVPHVWATP 232
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|553195737|ref|XP_005856197.1| (px domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292875|gb|EKU20177.1| px domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.559 bits (179), Expect = 2.990e-11 Identity = 44/101 (43.56%), Postives = 53/101 (52.48%), Query Frame = 0 Query: 212 YKVVCTLSGAGRAGGKEGGREG--GEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMP 310 + + T A G E G +G G G KE E R+RDFDKLD +RS F G HL SSLP LP K L + P F+E RR L+ Y+QRL P Sbjct: 189 FYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRF--RFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFP 287
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|553182844|ref|XP_005853793.1| (px domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422295267|gb|EKU22566.1| px domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 72.4034 bits (176), Expect = 3.215e-10 Identity = 76/261 (29.12%), Postives = 108/261 (41.38%), Query Frame = 0 Query: 53 TNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAV--EILFKV-DDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMP 310 TN L+ G V + W + P+ + H + L H+ ++G R V + EVPG+ G++ +A I F V D + I G F Y+C V R L L D E A G+ N + SS+ K + Y++ T G +G R +V RRYR+F L V +AF G HL SSLP LP + L D +D F+E RR LE L +L+ +P Sbjct: 4 TNVLQ--GEVHRSWVW--LSPAGAK----HVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSAEAHHINFTVGQDQCRGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADEDE-------ERFNIAILGAANAY-----------------SSKEKSVTWYELTVTR-------GSDGAR-----------TLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVP 214
BLAST of EWM24547.1 vs. NCBI_GenBank
Match: gi|585102925|gb|EWM22419.1| (px domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 72.4034 bits (176), Expect = 3.273e-10 Identity = 76/261 (29.12%), Postives = 108/261 (41.38%), Query Frame = 0 Query: 53 TNTLRNPGGVTKLWSFSLADPSQGRRERPHKLVLRHNKLSGTRFVVLDGIEVPGTRGTTSLLNAV--EILFKV-DDATATVSITPDLGAGGFIYSCRVGARLLTEQADVLEVSDMGSSLPHMEDVGGAANGSGNGHEAGRVPVRVMVPEFRTQSSEGKLIVHYKVVCTLSGAGRAGGKEGGREGGEEGGKEGEVVVFRRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMP 310 TN L+ G V + W + P+ + H + L H+ ++G R V + EVPG+ G++ +A I F V D + I G F Y+C V R L L D E A G+ N + SS+ K + Y++ T G +G R +V RRYR+F L V +AF G HL SSLP LP + L D +D F+E RR LE L +L+ +P Sbjct: 4 TNVLQ--GEVHRSWVW--LSPAGAK----HVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSAEAHHINFTVGQDQCRGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADEDE-------ERFNIAILGAANAY-----------------SSKEKSVTWYELTVTR-------GSDGAR-----------TLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVP 214 The following BLAST results are available for this feature:
BLAST of EWM24547.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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