rna614, rna614 (mRNA) Nannochloropsis gaditana

Overview
Namerna614
Unique Namerna614
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1565
Alignment locationCM002455.1:1535180..1536540 -

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Properties
Property NameValue
ProductProtein of unknown function DUF2305
Orig transcript idgnl|cribi|Naga_100170g3.5473.mrna
Orig protein idgnl|cribi|Naga_100170g3.5473
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1535180..1536540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100170g3gene590Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna614rna614-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30064.1cds614Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna614 ID=rna614|Name=rna614|organism=Nannochloropsis gaditana|type=mRNA|length=1565bp
TGGCTCAAGTGCTTTTTCCTATAGGTCAGGTGTCAAGTGGAAGCCAACAT
TGCCCGGTACCGCTCCAAAGTATAGTGAGCGGGGTCTTCAAACAGCGCGA
GCAGGGAGTCTTTACGCCACTTGAAGTGTTTCCTTCTCGTCACAACCATG
GCCATTCTTTACGCGCTCGTCGCACGGGGCAAAACTGTACTTGCAGAGTT
CACGAGTACGAGCGGCAACTTCCCAACAGTAACGCGATTCCTCCTAGCGC
GCATCGAGGACAAGGGTGTATCTCAAGGCAGCAATGGGGAGTCGAGCGGA
CAGAAGATGTCCATCATTTACGATCAGCACATCTTTCACTACCTGGTCGA
CGGGCAGGGCCACGCTTCGTCGCCACTCATATACTTATGCATGGTGGATG
ACGCTGAGAACAAGCGTCGCATGGCTTTCTTGTTCCTGGAAGAAGTGCAG
CGGCGTTTCATGGCCGCGTATGGGGATACAGCCTACACGGCGATTGCTTT
TGCCATGAACGAATCCTTTTCGCCCTCTCTGAAAAGCATGATGGATTTTT
ACAACGCGGATCCTTCAGCCGATAACTTGCAGCAGCTGCGCACGAAGATC
GACGACACCAAGAGCGTCATGGTGGAGAACATCGACCAGGTGCTCGAACG
GGGCGAGAAAATCGAGCTTTTGGTCGACAAAACTGACAGGCTCAGCCAAC
AGGCAGTGCAGTTCAAGAGACAATCCCGACGCCTTCAACAGAGTATGTGG
TGGCGACGCCTCAACCGTTATCTCTTGCTCTCTTTCGGCCTGGCCCTGGC
TCTCTTCTTCCTCACCACCTTGGGTTGCGGAGGCTTCGACTTCCATAAAT
GCAAAAAATAACCCAGAAGCAGAAGAGTCATTCTTGCCTCTTGCATGCTC
ACCACTTGGGGGCCATAGAATTTGCGTGAGCCCTAAAAGGCTTCAGCAAG
GCAATGAATAGGGTGGCGAGCTTGCCTGGGCGGAGCTCAAGGGGTTATGC
CCCTCTGGCTGGCCTTAAGGCTTGTCTGTGTACATAGATGCGAGTCCGGA
GCATGAGCTGATCGTTTCACTCAGCTAGTATGGTACAGAAACCAGATTGC
AACAAGCTTTAAAGGAAATCAACGACCTGTCATTCGCGCATTTTTTCCTC
CTTTCATCTTCTCGTGTCATGTCGTCACTCTAGAGCCTGGCCCGGGTGTC
GGTCAGAGCCTCCTTGCCTTCATGCCCTCCCACCACCTTCCCGACGATCT
GCAGCACAGTCTGGCACACCTCCTCGTCATGCGCCTCGTGGCAGGGAAAG
GCGTGCGGCACGTGACTCATGTCCACGCGGCGCTCCTCCGGCCAGGCGTC
CCACACGTACCGAGGGCTCCACTCGTCCCCCTCCGTGTACACCAGGTAGG
GCATGCTGCCATGCCGCTCCCCATGCATGTCAACATGGGAAAGGTCCGGA
CCTTTGCCCCCGATCTCGGCACGCTCACAAGCGGCCACACGCAAAATGGC
GCGAAGTGTTTCAGGACCAATGCCGCCACCTAGGCTCTGCCGCTTGAACG
GCGAAGAGATGAAGC
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protein sequence of rna614

>rna614-protein ID=rna614-protein|Name=rna614|organism=Nannochloropsis gaditana|type=polypeptide|length=317bp
MPQKQQEQRKEHDQHLDHPAADIGEPKSTAEDHSVHIYFFSGNPYVYALY
DNLLSLLRIRGHAKGHRISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQ
IWAHERARHSPSPTHTILVGHSFGAYIANLLLPHLTPVPIASIYLFPFLS
EPSWRGKLQLALADQAYRRTPFLGSALHGVTSRLFDWVLRFISSPFKRQS
LGGGIGPETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYT
EGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVCQTVLQIVGKV
VGGHEGKEALTDTRARL
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mRNA from alignment at CM002455.1:1535180..1536540-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna614 ID=rna614|Name=rna614|organism=Nannochloropsis gaditana|type=mRNA|length=1361bp|location=Sequence derived from alignment at CM002455.1:1535180..1536540- (Nannochloropsis gaditana)
CACCTTCTTGCATGGGAACCTGGCAATCTCCCTCTGATTCCAAGTCAATT
TTTTCCTATGCAGCGAGAGAGCAACAAAGAGCGCGACCCGAAGCCATTCC
CCCCGATCGACCCAGGCCCACGCGTGGGAGGGAGCCAACTCGCCTACCTG
AATGCCGCAGAAGCAGCAAGAACAACGAAAAGAGCATGATCAACACCTTG
ATCATCCCGCTGCTGACATTGGCGAGCCGAAATCAACAGCAGAGGATCAC
AGTGTTCACATCTACTTCTTCAGCGGAAATCCTTGTACGTCGAGGGAGGG
ATACAATCTGGAGGAAGATACAAGTTTTACTGGGAGAACTTTGAAACTCA
CAGATAAACACTGATCGAAAATGAATACCCTAAGACTTGGGGGGGTTTAA
TGCGCTCTGTCATCGGTCACGCCTTTTTTCACTTCCGCGCTTTTCACCCA
ACTTCCCCGTCCTCCCCCTATCTCCCGCTCCCACAGATGTGTACGCATTG
TACGACAACCTTCTGTCGCTCCTGCGCATCCGGGGGCACGCTAAAGGACA
CCGGATCTCCACACTTCTTGTGACCTATCCCTCTTTGCCCGATTTCTTCC
TAGCTGACCCTCAGGCAGCCTTTGCCTACATAGCCAAGGACGTGCACCAG
CAAATCTGGGCCCACGAACGCGCCCGTCATTCGCCTTCTCCTACCCACAC
TATTCTCGTCGGTCATTCCTTTGGCGCATACATTGCCAACCTACTGCTGC
CCCATCTCACGCCCGTTCCGATAGCATCCATCTACCTCTTCCCATTCCTC
TCGGAGCCCTCTTGGCGGGGCAAGCTCCAGCTCGCTCTCGCCGACCAAGC
CTACCGACGAACTCCTTTCTTGGGTAGCGCTCTCCATGGTGTCACCTCTC
GCCTCTTTGATTGGGTCCTGCGCTTCATCTCTTCGCCGTTCAAGCGGCAG
AGCCTAGGTGGCGGCATTGGTCCTGAAACACTTCGCGCCATTTTGCGTGT
GGCCGCTTGTGAGCGTGCCGAGATCGGGGGCAAAGGTCCGGACCTTTCCC
ATGTTGACATGCATGGGGAGCGGCATGGCAGCATGCCCTACCTGGTGTAC
ACGGAGGGGGACGAGTGGAGCCCTCGGTACGTGTGGGACGCCTGGCCGGA
GGAGCGCCGCGTGGACATGAGTCACGTGCCGCACGCCTTTCCCTGCCACG
AGGCGCATGACGAGGAGGTGTGCCAGACTGTGCTGCAGATCGTCGGGAAG
GTGGTGGGAGGGCATGAAGGCAAGGAGGCTCTGACCGACACCCGGGCCAG
GCTCTAGAGTGACGACATGACACGAGAAGATGAAAGGAGGAAAAAATGCG
CGAATGACAGG
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Coding sequence (CDS) from alignment at CM002455.1:1535180..1536540-

>rna614 ID=rna614|Name=rna614|organism=Nannochloropsis gaditana|type=CDS|length=1908bp|location=Sequence derived from alignment at CM002455.1:1535180..1536540- (Nannochloropsis gaditana)
ATGTGTACGCATTGTACGACAACCTTCTGTCGCTCCTGCGCATCCGGGGG
CACGCTAAAGGACACCGGATCTCCACACTTCTTGTGACCTATCCCTCTTT
GCCCGATTTCTTCCTAGCTGACCCTCAGGCAGCCTTTGCCTACATAGCCA
AGGACGTGCACCAGCAAATCTGGGCCCACGAACGCGCCCGTCATTCGCCT
TCTCCTACCCACACTATTCTCGTCGGTCATTCCTTTGGCGCATACATTGC
CAACCTACTGCTGCCCCATCTCACGCCCGTTCCGATAGCATCCATCTACC
TCTTCCCATTCCTCTCGGAGCCCTCTTGGCGGGGCAAGCTCCAGCTCGCT
CTCGCCGACCAAGCCTACCGACGAACTCCTTTCTTGGGTAGCGCTCTCCA
TGGTGTCACCTCTCGCCTCTTTGATTGGGTCCTGCGCTTCATCTCTTCGC
CGTTCAAGCGGCAGAGCCTAGGTGGCGGCATTGGTCCTGAAACACTTCGC
GCCATTTTGCGTGTGGCCGCTTGTGAGCGTGCCGAGATCGGGGGCAAAGG
TCCGGACCTTTCCCATGTTGACATGCATGGGGAGCGGCATGGCAGCATGC
CCTACCTGGTGTACACGGAGGGGGACGAGTGGAGCCCTCGGTACGTGTGG
GACGCCTGGCCGGAGGAGCGCCGCGTGGACATGAGTCACGTGCCGCACGC
CTTTCCCTGCCACGAGGCGCATGACGAGGAGGTGTGCCAGACTGTGCTGC
AGATCGTCGGGAAGGTGGTGGGAGGGCATGAAGGCAAGGAGGCTCTGACC
GACACCCGGGCCAGGCTCTAGATGCCGCAGAAGCAGCAAGAACAACGAAA
AGAGCATGATCAACACCTTGATCATCCCGCTGCTGACATTGGCGAGCCGA
AATCAACAGCAGAGGATCACAGTGTTCACATCTACTTCTTCAGCGGAAAT
CCTTATGTGTACGCATTGTACGACAACCTTCTGTCGCTCCTGCGCATCCG
GGGGCACGCTAAAGGACACCGGATCTCCACACTTCTTGTGACCTATCCCT
CTTTGCCCGATTTCTTCCTAGCTGACCCTCAGGCAGCCTTTGCCTACATA
GCCAAGGACGTGCACCAGCAAATCTGGGCCCACGAACGCGCCCGTCATTC
GCCTTCTCCTACCCACACTATTCTCGTCGGTCATTCCTTTGGCGCATACA
TTGCCAACCTACTGCTGCCCCATCTCACGCCCGTTCCGATAGCATCCATC
TACCTCTTCCCATTCCTCTCGGAGCCCTCTTGGCGGGGCAAGCTCCAGCT
CGCTCTCGCCGACCAAGCCTACCGACGAACTCCTTTCTTGGGTAGCGCTC
TCCATGGTGTCACCTCTCGCCTCTTTGATTGGGTCCTGCGCTTCATCTCT
TCGCCGTTCAAGCGGCAGAGCCTAGGTGGCGGCATTGGTCCTGAAACACT
TCGCGCCATTTTGCGTGTGGCCGCTTGTGAGCGTGCCGAGATCGGGGGCA
AAGGTCCGGACCTTTCCCATGTTGACATGCATGGGGAGCGGCATGGCAGC
ATGCCCTACCTGGTGTACACGGAGGGGGACGAGTGGAGCCCTCGGTACGT
GTGGGACGCCTGGCCGGAGGAGCGCCGCGTGGACATGAGTCACGTGCCGC
ACGCCTTTCCCTGCCACGAGGCGCATGACGAGGAGGTGTGCCAGACTGTG
CTGCAGATCGTCGGGAAGGTGGTGGGAGGGCATGAAGGCAAGGAGGCTCT
GACCGACACCCGGGCCAGGCTCTAGATGCCGCAGAAGCAGCAAGAACAAC
GAAAAGAGCATGATCAACACCTTGATCATCCCGCTGCTGACATTGGCGAG
CCGAAATCAACAGCAGAGGATCACAGTGTTCACATCTACTTCTTCAGCGG
AAATCCTT
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Synonyms
Publications