EWM30064.1, cds614 (CDS) Nannochloropsis gaditana

Overview
NameEWM30064.1
Unique Namecds614
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1536257..1536389 -
Alignment locationCM002455.1:1535234..1536054 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30064.1
ProductProtein of unknown function DUF2305
Orig transcript idgnl|cribi|Naga_100170g3.5473.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1536257..1536389 -
CM002455.1supercontigCM002455.1:1535234..1536054 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR019363DUF2305
Homology
[Close]
BLAST of EWM30064.1 vs. NCBI_GenBank
Match: gi|585112696|gb|EWM30064.1| (Protein of unknown function DUF2305 [Nannochloropsis gaditana])

HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 
Query:    1 MPQKQQEQRKEHDQHLDHPAADIGEPKSTAEDHSVHIYFFSGNPYVYALYDNLLSLLRIRGHAKGHRISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQIWAHERARHSPSPTHTILVGHSFGAYIANLLLPHLTPVPIASIYLFPFLSEPSWRGKLQLALADQAYRRTPFLGSALHGVTSRLFDWVLRFISSPFKRQSLGGGIGPETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYTEGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVCQTVLQIVGKVVGGHEGKEALTDTRARL 317
            MPQKQQEQRKEHDQHLDHPAADIGEPKSTAEDHSVHIYFFSGNPYVYALYDNLLSLLRIRGHAKGHRISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQIWAHERARHSPSPTHTILVGHSFGAYIANLLLPHLTPVPIASIYLFPFLSEPSWRGKLQLALADQAYRRTPFLGSALHGVTSRLFDWVLRFISSPFKRQSLGGGIGPETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYTEGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVCQTVLQIVGKVVGGHEGKEALTDTRARL
Sbjct:    1 MPQKQQEQRKEHDQHLDHPAADIGEPKSTAEDHSVHIYFFSGNPYVYALYDNLLSLLRIRGHAKGHRISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQIWAHERARHSPSPTHTILVGHSFGAYIANLLLPHLTPVPIASIYLFPFLSEPSWRGKLQLALADQAYRRTPFLGSALHGVTSRLFDWVLRFISSPFKRQSLGGGIGPETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYTEGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVCQTVLQIVGKVVGGHEGKEALTDTRARL 317
[Close]
BLAST of EWM30064.1 vs. NCBI_GenBank
Match: gi|553188723|ref|XP_005854853.1| (hypothetical protein NGA_0419200 [Nannochloropsis gaditana CCMP526] >gi|422294207|gb|EKU21507.1| hypothetical protein NGA_0419200 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 309/317 (97.48%), Postives = 312/317 (98.42%), Query Frame = 0 
Query:    1 MPQKQQEQRKEHDQHLDHPAADIGEPKSTAEDHSVHIYFFSGNPYVYALYDNLLSLLRIRGHAKGHRISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQIWAHERARHSPSPTHTILVGHSFGAYIANLLLPHLTPVPIASIYLFPFLSEPSWRGKLQLALADQAYRRTPFLGSALHGVTSRLFDWVLRFISSPFKRQSLGGGIGPETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYTEGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVCQTVLQIVGKVVGGHEGKEALTDTRARL 317
            MPQKQQEQRKEHDQHLDHPAAD GEPKSTAEDHSV IYFFSGNPYVYALYDNLLSLLRIRGHAKG RISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQIWAHERARHSPSPTHT+LVGHSFGAYIANLLLPHLTPVPIASIYLFPFLSEPSWRGKLQLALADQAYRRTPFLGSA+HGVTS LFDWVLRFISSPFKRQSLGGGI PETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYTEGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVC+TVLQIVGKVVGGHEGKEALTDTRARL
Sbjct:    1 MPQKQQEQRKEHDQHLDHPAADTGEPKSTAEDHSVQIYFFSGNPYVYALYDNLLSLLRIRGHAKGRRISTLLVTYPSLPDFFLADPQAAFAYIAKDVHQQIWAHERARHSPSPTHTLLVGHSFGAYIANLLLPHLTPVPIASIYLFPFLSEPSWRGKLQLALADQAYRRTPFLGSAVHGVTSCLFDWVLRFISSPFKRQSLGGGIDPETLRAILRVAACERAEIGGKGPDLSHVDMHGERHGSMPYLVYTEGDEWSPRYVWDAWPEERRVDMSHVPHAFPCHEAHDEEVCETVLQIVGKVVGGHEGKEALTDTRARL 317
The following BLAST results are available for this feature:
BLAST of EWM30064.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112696|gb|EWM30064.1|0.000e+0100.00Protein of unknown function DUF2305 [Nannochlorops... [more]
gi|553188723|ref|XP_005854853.1|0.000e+097.48hypothetical protein NGA_0419200 [Nannochloropsis ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna614rna614Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications