rna6137, rna6137 (mRNA) Nannochloropsis gaditana

Overview
Namerna6137
Unique Namerna6137
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2272
Alignment locationCM002467.1:671088..672036 +

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Properties
Property NameValue
Productglobin domain protein
Orig transcript idgnl|cribi|Naga_100613g3.4710.mrna
Orig protein idgnl|cribi|Naga_100613g3.4710
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:671088..672036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100613g3gene5928Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6137rna6137-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24551.1cds6122Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6137 ID=rna6137|Name=rna6137|organism=Nannochloropsis gaditana|type=mRNA|length=2272bp
GATAACATTTCACGTGAAAAATGAATTTACCCTGTAATTTTCACTTTAAT
ACCAACTTTTATGCACAGGAACGCAACAGGTTGTGGACGACGTATATGTA
GTGCCATGCCTACCCCTTCAGCACCATCATCTCCCTCGCCCCAACGACGC
AGCTCCCGCCTGGCCGCAGCCGCCGCTGCTACGTCCACATCACCTGGCAG
AGGGGTCATTGCAGCTGATTCATCGTCACTTTGGGGCTCGGCTGGAGCGA
GCGAGGCTTCCTCCACCTCCTCCTGTCCACCCACCTCCACTTGCAACTCC
CCCGCTCCCGCATGTAGATATTCCCCCAAAGCTTCGTCCCCACCTTTCCC
CTTCCACTCCACTCCTCTTTCCCTCGCCCTTCTTTCGCGCTCCCCAACGA
CGCGACACGGCTCGTTAAAAGTCAGCGGAAACCCCATGCTCTGGCGCGAG
GCCTACGGACCCCGGGTCGTCCGTCGCCTCAGCCTGGCCTATGCCGCCGC
GGACGGCGCCCACTTTTACCCCAACCTGTTGGCGGGGGCTGTAAGCGGTT
TCGAGTCTGCCCTTTTCAACGCGTCTTTCAGCAGGGACGGGCAGATGCTC
TTCACGGCCTGCCAGGACGGCACCATCAACTTGTACGGGATGGAACAGCT
GCTCTACGTGCAGGCCCGGTGCAAAGTTCGCGAGACAGAGGGAGGAGGGA
CCACAGCCGAGCCCTTCCAGGTATCTGCCTCCTGCCCCACCCCCCAGGCG
CCGGACCGGCTCCTCCCTCAGAAACAGATCCACTGTCAGTACGTGGGATG
GGCGATCGTCGGCTCCTGTTTCAGTCCGGATGCCAAGTGGATCGCGTATT
CCTCCTGGTCCCGCTCCCTGCATTTGACCAATACCTTTGGGCGCCACGAA
CTACACGAAGCCATCGTGGTGTCTCCCCATCGCTCCCACCATTTCTGCCT
TTTCTCCCTCGCCTTCTCGGCGGACGGGGCCAAGGTCATCGGGGGAGGTA
ACGACGGCGGCCTGCACCTCATCCACTTGGAACGGAAGCACGCCAGCCAC
ATTGAACAGGCGCACCAGGACGACGTGAACAGCGTCTGTTTTGTGGATCC
GGAGCAGGCACCGAGCCTGGTCCTGTCCGGTTCGGACGACGGCTTGATCA
AGCTGTGGGACTTGCGGACGGAGCGAGCCCACGGGCTGTTGGCGGGGCAT
GTGAGTGGGATCACGAGCGTCTGCAGCAAGGACGGTGGGCCCGGGGGAGG
GCGGGGGGGAGGGAGGTATTTGGTCAGCAATGGGAAAGACCAGACGACCA
AATTGTGGGATTTGAGGAAGATGGTGGAGGCCGGGCGGGACGCAGAGGCA
CGGTATGCGGTGGATTTGGACGGTGACTATCGGTTTGCGACGATTTGGAA
CGAAGGAGGTGGGCGGGGGGGGGGAGGCAGCGGCGGAGGAAGCATCCGGT
GGGCGATCACTCGATTCAGACGTGGCGGGGTCATCGGATTGCCCGGACGT
TGATTCAACCGGCGTTTTCCCCGGAGGCATTGACGGGGGGCAGGTACGTG
GTCACAGGGAGCGCGGACGGCCGCCTCTTTGCCTACGACACTTTGGCCGC
AGAGGGGGAAGAAGCGGGGCAGGCCGGGCGGGAGGACGGGCGGGCGGTGG
AAAAGCTGGCTTTCCACGACGACGTGGTTCGCACCGTGGCGTTTGCGCCT
CAGGTGGACCTGATGGTGTCCACAGGGTGGGACGGCAGCCTGGGCCTGTG
GCGTTTCCAAGGACAGCGGGCCAAGGGGGAGGGGGGGGAAGGGAGCTGAG
AGGGGGAGGAAGGGTGGATGGTGGAGCTGGAGAGGTAATCCCCCCCCCCA
TGCTGTGAGGATGTATGTATGGAATAAAAAGGTGCCAGGGTGTTTCCTCC
GCGAAGGCAGGGGCGGACGGGGCGTGGTGCCAGTGGGTGCGAAAGCCGGT
GCCGGGCGTGGGAAGGGGGAGGGAGAAAGGGTGGGGAGACCGTGGTCAAA
GACATCGCGTGCACGTCGTAGGAGGAAGTACGTCGGGGGCCTTGGAATTG
TAGATAATCTGCGAGAGGAAGGAGAGTGGTTGTGTGGAAGGGAGCCATGT
CTACATGCGGTGTGTACGATTGCCACGAGACGAAGCGAATCAAGCTGCAG
TGTAGAGGGGAGACAAACCTATGAAAGACCAGCACGGCGCATCCAATCGA
GCTTCCTCAGGAAAGGCAGGGAAGCATGGCTCGTCCCTAGGATCTCATTA
CTTTTACGCTGTGTTCACATGC
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protein sequence of rna6137

>rna6137-protein ID=rna6137-protein|Name=rna6137|organism=Nannochloropsis gaditana|type=polypeptide|length=142bp
SDMLIRLGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWAS
VFSFISHVMIKAAAEEAQRVAREGKQEGGKGRGEGGEGGGEASHGEGRGK
GCPITAPAHMPVNKVLSGLQLESIHTSHPDGHYLHRTPAKKG
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mRNA from alignment at CM002467.1:671088..672036+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6137 ID=rna6137|Name=rna6137|organism=Nannochloropsis gaditana|type=mRNA|length=949bp|location=Sequence derived from alignment at CM002467.1:671088..672036+ (Nannochloropsis gaditana)
CTCAGACATGCTGATTCGGCTGGGGAAGCGGCATCACGACCTCGGAGTGC
GGCCACAGCAGTATGTAAGCATGCAGCGCTCGATCCTGGTCTCTTTGGAA
GAGCTCTTGGGGGCGGAATGGAACAGGGACTACCGCGATGCCTGGGCCTC
GGTCTTTTCCTTCATATCGCATGTCATGATCaaagcggcggcggaggagg
cgcagcgggtggcgcgggaagggaagcaagaggggggaaagggaaggggt
gaggggggcgaggggggcggggaggcgtcgcacggagagggaagagggaa
gggttgTCCGATCACTGCCCCGGCCCATATGCCTGTAAACAAGGTGTTGA
GCGGTTTGCAGCTCGAATCGATCCATACCTCCCATCCCGACGGTCACTAT
TTGCATCGGACACcggcgaagaaagggtgagggggagggaggccggcgga
gggggggtgggagacgaaggaaggagggcgaccgAAGGCGGAGTCAGGGC
GTCGGTGTATGTATTGTAATGTTTCCAGAGTGCTGCATGGTATTGTGCat
ggagcgggggggagaaattAGCAAAGAAGCGGTCTTTTTCGTGAGGCTGG
GTAGAAGAGAtgccaaggcggggaggaggagaaggaagggagggaggcaa
gcgtTGCGAGAGACTCGGAATCTTATCGCCGCATGATAGCGGGAGGCGCG
CAAGCGGGGTGCGTCTTCCATCATACTCCGAGCAACCCAAGCCCCGGGCC
GCTCTGGCACTGGGATGGTGAGACTTCTTGCTGCCTGCTATCTTTCAACC
CGAATTCCTACACAAGAAACACGAAACCATCTTGAACCTATTCCTGCCAT
TGCTTCCTGATTCATCATCACATTATTTCCATGCCCCTCTCGCACCACGC
CTTGGCTTCCCTCAGAGCTGCGCACGCCCTAAGGACTTTCGAACTGCTT
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Coding sequence (CDS) from alignment at CM002467.1:671088..672036+

>rna6137 ID=rna6137|Name=rna6137|organism=Nannochloropsis gaditana|type=CDS|length=429bp|location=Sequence derived from alignment at CM002467.1:671088..672036+ (Nannochloropsis gaditana)
TCAGACATGCTGATTCGGCTGGGGAAGCGGCATCACGACCTCGGAGTGCG
GCCACAGCAGTATGTAAGCATGCAGCGCTCGATCCTGGTCTCTTTGGAAG
AGCTCTTGGGGGCGGAATGGAACAGGGACTACCGCGATGCCTGGGCCTCG
GTCTTTTCCTTCATATCGCATGTCATGATCaaagcggcggcggaggaggc
gcagcgggtggcgcgggaagggaagcaagaggggggaaagggaaggggtg
aggggggcgaggggggcggggaggcgtcgcacggagagggaagagggaag
ggttgTCCGATCACTGCCCCGGCCCATATGCCTGTAAACAAGGTGTTGAG
CGGTTTGCAGCTCGAATCGATCCATACCTCCCATCCCGACGGTCACTATT
TGCATCGGACACcggcgaagaaagggtga
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Synonyms
Publications