EWM24551.1, cds6122 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24551.1 vs. NCBI_GenBank
Match: gi|585106062|gb|EWM24551.1| (globin domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 290.426 bits (742), Expect = 2.123e-99 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 SDMLIRLGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWASVFSFISHVMIKAAAEEAQRVAREGKQEGGKGRGEGGEGGGEASHGEGRGKGCPITAPAHMPVNKVLSGLQLESIHTSHPDGHYLHRTPAKKG 142
SDMLIRLGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWASVFSFISHVMIKAAAEEAQRVAREGKQEGGKGRGEGGEGGGEASHGEGRGKGCPITAPAHMPVNKVLSGLQLESIHTSHPDGHYLHRTPAKKG
Sbjct: 1 SDMLIRLGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWASVFSFISHVMIKAAAEEAQRVAREGKQEGGKGRGEGGEGGGEASHGEGRGKGCPITAPAHMPVNKVLSGLQLESIHTSHPDGHYLHRTPAKKG 142
BLAST of EWM24551.1 vs. NCBI_GenBank
Match: gi|1179947579|ref|WP_083469933.1| (hemin receptor [Herpetosiphon geysericola]) HSP 1 Score: 56.9954 bits (136), Expect = 1.064e-7 Identity = 22/57 (38.60%), Postives = 42/57 (73.68%), Query Frame = 0
Query: 7 LGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWASVFSFISHVMIKAA 63
LG+RH D GV+P+ Y ++ +++ +L + LG +WN + +DAW + +S +++VMI+A+
Sbjct: 69 LGRRHIDYGVKPEHYDTVGAALVWALAQQLGPQWNTEVQDAWVAAYSLVANVMIEAS 125
BLAST of EWM24551.1 vs. NCBI_GenBank
Match: gi|934113552|gb|KPL86218.1| (hemin receptor [Herpetosiphon geysericola]) HSP 1 Score: 56.9954 bits (136), Expect = 1.258e-7 Identity = 22/57 (38.60%), Postives = 42/57 (73.68%), Query Frame = 0
Query: 7 LGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWASVFSFISHVMIKAA 63
LG+RH D GV+P+ Y ++ +++ +L + LG +WN + +DAW + +S +++VMI+A+
Sbjct: 80 LGRRHIDYGVKPEHYDTVGAALVWALAQQLGPQWNTEVQDAWVAAYSLVANVMIEAS 136
BLAST of EWM24551.1 vs. NCBI_GenBank
Match: gi|655257474|ref|WP_028667990.1| (hemin receptor [Runella zeae]) HSP 1 Score: 55.4546 bits (132), Expect = 4.586e-7 Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query: 3 MLIRLGKRHHDLGVRPQQYVSMQRSILVSLEELLGAEWNRDYRDAWASVFSFISHVMIKAA 63
+L LGKRH GV QY S+ S + +LEE+L E+ D R AW V+ +S VMI+AA
Sbjct: 73 LLQDLGKRHIKYGVEASQYASVSESFMWTLEEILKDEFTPDIRQAWEEVYQLMSSVMIEAA 133 The following BLAST results are available for this feature:
BLAST of EWM24551.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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