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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100140g9.4489.mrna |
| Orig protein id | gnl|cribi|Naga_100140g9.4489 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:636740..637780 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6126 ID=rna6126|Name=rna6126|organism=Nannochloropsis gaditana|type=mRNA|length=5236bp
ATGGCCTGCGCAGTCTTTCTTTGGACAAATCGAAAAGAAAATAAAGCATG
GCATGCTTTTAATCGAGCATCTCGCAACGCCCATTCCGTTCAAGCCCTTC
GACGTCTCCATCTCAACCATGACAATATACGGCCTCCATCGGCGCACAGG
GACATCCATTCACCTGTTTCCAGGTCTTTCTTCTCGTGCTTGGAATCTTT
CCGCCTAGGTGCTTCGAGATACTTTGAGGCATTAGTACATCGAGTTCGCG
ATTCAGTTCCATCGAGCCGCAACATGGCCCGTCCCCACAACCAACCGAAA
TGGACAGGAAAGCGCATTCTTTCGTTACAATTGTACCAAAATATCGGTGG
TCTCTTCGGTGGCTTAATATCATGGGAACATTTGCCGTTCATGGTGCTGT
ACGCAGTCGTTTTCCACTGGTGCTATACGACTATGGGTGACCCGTACCAG
CAGGCCTTGGCCAAGGCCGACAGTGAGGGCGCCAGTTTGCCTCACACGGT
GGAGCATCTCCGTGCCTCCGCCTCTGCGTTCCTCTTGAAGGCGCCCGTGG
ACCCGTCAGCCGCGGAGAAGGAGGCCCCGTTCTCTTTTTGGGGGATGGGG
GAAGCGAACAACGAGCCAGCGGTCCCGGACTACTACCTCCCTTCCCCGTA
CCTCCCTGGGTTTTGGCCGCTGTTCGCCCTGGGCTCGGTCGCCACCTTGC
ACGCCCTGATCCTCCTCTTGCAAGTGTGGGTGGTGGATATAAAGTGCTGG
GTCCGGTACCGGCCTGTGAGGAACGTCTCGGAGGCCACGCACTTGAGGAT
CGTCCCCCGTGCCTTCCGTGGGAAGAAGCAGCTGCTCCCGCTCGAGAGGG
GGGGGTTGGGCACCTGGTTTCTATTGGAGCGTCGGCGGTACCTGTATATC
CCAGAGAAGGAGACCTTCCAGAAGATTCGGTGCAAGGTAGACTGGCCCCT
GGCCTTCTTTGGGAAATGGCGAGGCTTTGCAACGGACGGGGAGGTGATGG
ACGCGCAGGAACGCTTTGGGAAGAACCTATTCGAGATCACCCTGCCCGCC
TTCATGGATTTGTACAAGCAGCAGTTGCTGAGCCCCTTCACGGTTTTTCA
GCTCTTCTGCGTCATCCTCTGGTGCCTGGATTCTTACTGGCAGTACAGCG
TCTTCACCCTCTTCATGATATTCTCCTTTGAGGCCAGCGTGGTGATGCAA
CGGATCAAGAACCTGAACGTGCTCAAGGGTATGGACAACAAAGTACTGGA
CGTGCTGGTGTTTCGAAACCGACGCTGGGAAGTGACTCGGACCACGGAGC
TGGTCCCTGGGGATGTGTTTTCGTTGCTTAAGACCCCGGAGAACGACGGC
ATTGTGCCCTGCGATTGCCTCCTCCTCCAGGGCTCGACCGTAGTGAACGA
GGCGACCCTGACAGGCGAGAGCATCCCCCAGATGAAGGAGGCCCTGGCCA
AGGGAGAGGGGGAGGGCGGGGAGGTTCTGGACATCAAGAGCGGGACGGGG
AAGGTGCACGTCATGTTTGGGGGCACGCGTCTGTTGCAAGTGAGTGCCGG
GGGCGGGAGCAACACGGTCGAGGTGCTGGACGACGAGGAACGTGCCGAGG
AAGGGGAAGCTTCTCTCCACGGCCCACATGCGACGGAGGGGCAAGAGAAG
GATGGGGGAAGCGAGGAAGGGGAGAATGGAGAAAGCGTGTCTATGGACGA
GGAGGGCATCCCACCCCCGCCGGACCACGGCTGTGTGTGCTACGCCCTCC
GTACGGGTTTCAGCTCCTCCCAGGGGAAACTGGTGCGCATGATCGAGGGG
AGCACGGAGGGCGTCCGCACGGACACCCGGGACACCGCGCTCCTCCTCCT
CCTCCTCCTCCTTTTCGCCATCGCTGCCTCTGGCTACGTGCTGAAGAAAG
GGATGGAGCGCGGGGACAAGTCCAAGTACCAGCTTCTCCTCCACTGCGTG
CTCATCGTCACCAGCGTCATCCCCCCCGAGCTCCCCATGCAGATGGCCCT
GGCCGTGAACTCCGCCCTACTGACCCTGATCAAGATGCAGATCTTTTGCA
CGGAGCCCTTCCGCGTCCCCGCGGCTGGGAAAGTGGATGTCTGCCTCTTC
GACAAGACGGGGACCCTAACCACGGACGAGCTGGTGGCGGTGGGGGTCAC
GGATATGGGCCGGCGGGGAAGCGAAAGCGGGCGGGACGGAGGGAGGGAAA
CGGAAGCCTTGGGTCTGACGGGCATGCAGGAGGCAGGGGCGGCGGCCACG
GTGGTATTGGGCGCCTGCCATGCCCTGGTGCTCGTGGACGGGAAAGTGGC
GGGCGATCCGATCGAGGCTGCCGCCCTGAAGGAGATCAAGTGGGAGATTG
TGGAACGATCCCGCGTCCAGGAAAGGAAGGGCGGGAGGCCGGGGAGAGAC
GGTGGGAGTAGCGCGGGCATGGTGACGGAATGTCGCCCCCTGCCCGCGCA
AACGGCGGCGCGGGGCCCTCGGGCTTTCCATGTCGAAGGCTTTGGGCCGG
CGGGGTGCCTGCATATTGTCGCCCGCCACCATTTCTCCAGCAAGTTGCAA
CGCATGTCCGTGGTGGTGCGGGCAGGCCTCCCGGCATCCGGGACGGCCGT
CAGTGGTCAGGGCGCCCCCAAGGCACTGGTCTTGGTGAAGGGTTCTCCGG
AAGCCATCGCCAAGCTCCTGGCTCCGGCGGCGGCCGCCTCGCTGCCCCTG
ACCCGCTACCATCAAACGGCCGCGCACTTGGCGAAAGAAGGGATGCGGGT
CCTAGCCTTGGCCTACAAAGTCGTGGAAGGCACGGTGGAAGAGGTAGACC
GTGTGGTGAGCAGCCGGCAGGCCGCCGAGTCGGACCTGCTATTCGCGGGC
TTTGTGGCGTTTACCTGCCGGGTACGGAGAGACACGGCGGCGGTGGTGGC
CCAGCTGAAGGAAGGGAAGCACGCGGTCGCCATGGTGACGGGGGATGCTC
TGCTCACGGCGGTGCATGTGGCGAAACAAGTGGGGATATGTCGTGCGGGG
AGGAAAGGAATGTTGATCCTTGGGGTGCAGGGGGAGGGAGAGGAGGGCGG
GCACGAGAAAAATCCGGGGCCGCCCAGGATTTTTTGGGAGAGTTACGAGA
CTGGAAAAGAGGTGGACGTAGCCTTTGACCCTGAAAAAGTACCACTTCTG
GCGCGAGATTACGATTTATGCACCGCCGGAATGCCCTTGGCGGTGGCCAG
CAAGGTCCACCCCGCCCTCCGTCGGCACCTGGAGCATTTCGTGGTGTTTG
CGCGAATGACGCCCGACGAGAAGGAGGCCGTGATCACCTCGCTGAAGGCG
GAGGGCCGGGTGTGCATGATGTGTGGAGACGGCGCGAACGACGTGGGGGC
GCTGAAACAAGCGGACGTAGGCGTCGCCCTCCTCTCCGGCTTTGGAGACC
TGAATGTGGACCGTGGTACAGGCGCTGCCAACGACTCCACAGGGGCTACC
CCTTCCACTTCCTCTCTGACGGCCATCATGACGAAGGCCCAACTGGAGGA
ACTGCAGCGGATGAAACCCTCAGAAATCAAGAAGAAGCTTCGCGCCTTGG
GTGTGGCTCCCGAGGATCACCCGCAGGTGGTGGAGAAGGCGGAGCTGATC
CGGCTCTACCAAGCCGCAGTGCAACGCCGGGCGGCGAAAGAGCACGACGC
AAAGAACGCACGCGAGGCAGCGGCGGGCGTGGTCGCCGCGGGTGGGCGCA
AGGGACAACCCAAGACCCCCCAAGAGCTCCGGGCCCAGCAAGAGAAAGAG
CGGCGGGAGATGCTGTTGGCCAAGCAGGAAGAACTTCGGAAAGAAATGGA
GGAGCGGACGGCCAAGGGGGAGAGCTTTGCCATGGTGCGCGCCTTGATGT
CGGTGTATCAGAAAGAGGCGGCTGCCGCCAAGGAAAAGCGAGCCAAAATG
GCTGCTGACAGCACGCTGACCGCGTCGGCAGCAAAAATGGCGGCAATGAT
GGAGGAAATGGACACAGGGGAAGGTGGTGGGGAGCTGCCCATGGTCAAGG
TGGGCGATGCCTCGGTCGCGGCGCCGTTTACTTCCAAGATGCCCTCGATC
CGTGGCACCGTCGACATTATCCGGCAAGGCCGGTGCACGCTCGTCACCAC
CATTCAGATGTACCAAATCCTGGCTCTGACCTGCTTGATCTCCTCTTACT
CCCTCTCGGTGCTCCACTTGGATGGAGTCAAGTACGGAGACTATCAGATG
ACGGCCTTGGGTATTCTCATGTCCATCTCCTTTGTGACCGTGTCCCGCGC
CAAACCCTTGGAGCGTCTGTCCAGTGTGCGGCCATTCAATTCGATCTTCC
ACCCCGCCTTGTTTTTCTCCATTTTGGGCCAGTTCGCCCTGCACCTGATA
TGTATGATGCTGGCGGTACGGGAGAGCAAGAAGCACCTCCCGCCCGATTT
CAAGATTGAGGTGGAAGGGGAGTTTAAGGCCAACATTATCAACTCGGTGG
TCTTTCTGGTCTCCGCCGTCCAGCAAGTGAGCGTCTTCGTCGTGAACCTG
AAAGGCCCTCCCTTTATGAGCGGCCTGGGGGACAACAGTCCTCTGCTCTA
TTCGCTGGCAAGCACATTTGTCCTGACTTTCTTGCTGGCCTCCGAAAGCA
TGCCGCAACTGAACAAATTTCTCCAGCTTGTTCCTTTCCCCACTCCCGGC
TTCCGGAATTTGGTCCTCCTGCTTTTGGCGGGAGACATTGCCTGCGCTAC
CGTGTGGGACCGTCTGATGACCTTTATCTTCGCACCGCACGTTCTTCGAG
CCAGCTTGGAAGGTTTGACGGGAAAAGATGGCGTGCGCATGCTCAAGATT
TTGGTCGTGATCACGGGCGTGATCTGGTTTCTTTGCCAAGGAGACCTAGA
TTTGGAGGAGTTCGGCGGCTTGATGGGCGGGGACGCTGCCGTTGGGGTTG
AGAAAAATGAGACTGGCTCCTGGCTGAACGTGGTGGTGCCACCGCGGCCG
ACGTTGGAAGGGGGAGGCCTGGAAGATGGACTGGATGAGTTTGTGGGTAC
CTAAGTAGATACGGTGACAGGATTTTCCGGCACGAAGACTGCCAGTCAGG
GACAAAGAAGGGCATAGGAATCATAGACTCAAATCGGATGGACGAAGGGG
GACCAAAACCATTAAAGTCAGAAAAGCCCCAGGCAGCGATGCAAGTAAGA
GAGCACCAATGGCTGGGCATCTTGGAAGGTTTTCTTTTATAGGCGACATT
TTGGCCGTCACTTGCTTGCTTGCTACGGGAACGTGG back to topprotein sequence of rna6126 >rna6126-protein ID=rna6126-protein|Name=rna6126|organism=Nannochloropsis gaditana|type=polypeptide|length=286bp
MKTGVSRGLKRGRHMNPYQKSFLLLAAAFTAGASSGLGSADYVEKGQSSK
LHVVSPKAQLPHFLVRGGSSFVPPPPSQQSSPRAPPSQRKDDQQQPQERP
PQETAMYREQHVVTRPWGPSSTAYSYQRYYSVNPPSPEGGARHEILYPRI
MRTVGNSGVCILFMILTARSTHLYELADQISGIFKRLLVTLPVVGLLCAN
LAGVLLSLMQSFSRNSRSKTRLKAILSLNGLAEVIQIAYNAFRLILGNDQ
WTPREAYVGRIFTSVWILTICYAFSTSRWDSSGQFQ back to topmRNA from alignment at CM002467.1:636740..637780- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6126 ID=rna6126|Name=rna6126|organism=Nannochloropsis gaditana|type=mRNA|length=1041bp|location=Sequence derived from alignment at CM002467.1:636740..637780- (Nannochloropsis gaditana)
ATGAAAACGGGAGTCTCCCGCGGTCTGAAACGTGGTAGACATATGAACCC
GTACCAGAAATCTTTTCTTCTCCTCGCCGCAGCCTTTACCGCGGGGGCTA
GCTCTGGACTCGGGAGTGCAGACTATGTCGAGAAAGGGCAGTCCAGCAAG
CTGCACGTGGTCTCACCCAAGGTAGGTGGCACGAAAAGAGAGAACGAAGC
GGAACGAAGGAGATTTACTTTTTTTTGTTTAATCTTTCGACGACTGACAG
GCGGGTCACGTGGCAGAAGACGGGCGGGAAAATATCTGCCATATTCCGCT
TTTCCTCATGCTACGAGTGCTCTTCTCCTTCCACTTCCTTTCCCGAGACA
GGCACAACTTCCACACTTTCTCGTCAGGGGTGGCTCTAGTTTCGTCCCTC
CCCCTCCTTCTCAGCAATCAAGCCCTCGAGCACCCCCGTCTCAGCGCAAG
GACGACCAACAACAGCCGCAGGAGCGCCCCCCCCAAGAGACGGCGATGTA
CCGGGAACAGCATGTGGTCACCCGGCCATGGGGACCCTCGAGCACGGCTT
ACAGCTATCAAAGATACTATTCGGTCAACCCTCCCTCCCCAGAAGGAGGG
GCCCGGCACGAAATATTGTACCCCCGGATCATGCGCACGGTTGGTAACTC
GGGTGTGTGCATCCTTTTCATGATCTTGACGGCCCGTTCTACACATTTGT
ACGAGCTCGCGGACCAGATATCGGGGATTTTCAAGCGTCTCTTGGTCACG
CTGCCTGTCGTGGGTCTGCTTTGTGCGAACTTGGCCGGCGTCCTCCTCTC
CCTCATGCAATCGTTTTCGCGCAATTCTCGGAGCAAGACCCGGCTAAAGG
CCATCTTGAGCTTGAACGGCCTGGCCGAAGTGATACAAATTGCATACAAC
GCCTTCCGGCTTATTCTAGGTAACGATCAATGGACGCCTCGGGAGGCCTA
CGTGGGACGGATTTTTACCAGCGTATGGATTCTGACCATATGCTACGCCT
TCAGCACGAGTCGGTGGGATAGCTCGGGGCAGTTTCAGTAG back to topCoding sequence (CDS) from alignment at CM002467.1:636740..637780- >rna6126 ID=rna6126|Name=rna6126|organism=Nannochloropsis gaditana|type=CDS|length=1722bp|location=Sequence derived from alignment at CM002467.1:636740..637780- (Nannochloropsis gaditana)
GCACAACTTCCACACTTTCTCGTCAGGGGTGGCTCTAGTTTCGTCCCTCC
CCCTCCTTCTCAGCAATCAAGCCCTCGAGCACCCCCGTCTCAGCGCAAGG
ACGACCAACAACAGCCGCAGGAGCGCCCCCCCCAAGAGACGGCGATGTAC
CGGGAACAGCATGTGGTCACCCGGCCATGGGGACCCTCGAGCACGGCTTA
CAGCTATCAAAGATACTATTCGGTCAACCCTCCCTCCCCAGAAGGAGGGG
CCCGGCACGAAATATTGTACCCCCGGATCATGCGCACGGTTGGTAACTCG
GGTGTGTGCATCCTTTTCATGATCTTGACGGCCCGTTCTACACATTTGTA
CGAGCTCGCGGACCAGATATCGGGGATTTTCAAGCGTCTCTTGGTCACGC
TGCCTGTCGTGGGTCTGCTTTGTGCGAACTTGGCCGGCGTCCTCCTCTCC
CTCATGCAATCGTTTTCGCGCAATTCTCGGAGCAAGACCCGGCTAAAGGC
CATCTTGAGCTTGAACGGCCTGGCCGAAGTGATACAAATTGCATACAACG
CCTTCCGGCTTATTCTAGGTAACGATCAATGGACGCCTCGGGAGGCCTAC
GTGGGACGGATTTTTACCAGCGTATGGATTCTGACCATATGCTACGCCTT
CAGCACGAGTCGGTGGGATAGCTCGGGGCAGTTTCAGTAGATGAAAACGG
GAGTCTCCCGCGGTCTGAAACGTGGTAGACATATGAACCCGTACCAGAAA
TCTTTTCTTCTCCTCGCCGCAGCCTTTACCGCGGGGGCTAGCTCTGGACT
CGGGAGTGCAGACTATGTCGAGAAAGGGCAGTCCAGCAAGCTGCACGTGG
TCTCACCCAAGGCACAACTTCCACACTTTCTCGTCAGGGGTGGCTCTAGT
TTCGTCCCTCCCCCTCCTTCTCAGCAATCAAGCCCTCGAGCACCCCCGTC
TCAGCGCAAGGACGACCAACAACAGCCGCAGGAGCGCCCCCCCCAAGAGA
CGGCGATGTACCGGGAACAGCATGTGGTCACCCGGCCATGGGGACCCTCG
AGCACGGCTTACAGCTATCAAAGATACTATTCGGTCAACCCTCCCTCCCC
AGAAGGAGGGGCCCGGCACGAAATATTGTACCCCCGGATCATGCGCACGG
TTGGTAACTCGGGTGTGTGCATCCTTTTCATGATCTTGACGGCCCGTTCT
ACACATTTGTACGAGCTCGCGGACCAGATATCGGGGATTTTCAAGCGTCT
CTTGGTCACGCTGCCTGTCGTGGGTCTGCTTTGTGCGAACTTGGCCGGCG
TCCTCCTCTCCCTCATGCAATCGTTTTCGCGCAATTCTCGGAGCAAGACC
CGGCTAAAGGCCATCTTGAGCTTGAACGGCCTGGCCGAAGTGATACAAAT
TGCATACAACGCCTTCCGGCTTATTCTAGGTAACGATCAATGGACGCCTC
GGGAGGCCTACGTGGGACGGATTTTTACCAGCGTATGGATTCTGACCATA
TGCTACGCCTTCAGCACGAGTCGGTGGGATAGCTCGGGGCAGTTTCAGTA
GATGAAAACGGGAGTCTCCCGCGGTCTGAAACGTGGTAGACATATGAACC
CGTACCAGAAATCTTTTCTTCTCCTCGCCGCAGCCTTTACCGCGGGGGCT
AGCTCTGGACTCGGGAGTGCAGACTATGTCGAGAAAGGGCAGTCCAGCAA
GCTGCACGTGGTCTCACCCAAG back to top
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