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Properties
| Property Name | Value |
|---|
| Product | threonyl-trna synthetase |
| Orig transcript id | gnl|cribi|Naga_100462g5.1413.mrna |
| Orig protein id | gnl|cribi|Naga_100462g5.1413 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:612049..613409 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6116 ID=rna6116|Name=rna6116|organism=Nannochloropsis gaditana|type=mRNA|length=1725bp
CATAGCAGGCGCTACAATCGAGACGCGCAACGACCACAGAGATCTGTGGT
TGGTACAAAGGGAGACGTTGTTATGGAGCAACGCAGCGGCACTGCATTTC
GAAAGCATCTACCCTCTGCGTCACTCCTCCCCGCTGCTGGCCTGACTTTG
TGGGCGCTAACAACCGGTAGCATGCTTGTACTCTCCTCAATCGCGTGCAC
GGCCTCCGCCCGCGCCACGAGTGGCACTCGACGTGCCGCCCTCAACGCAT
TTTTACGCCCCACACTATCATCGTATCTCCCGTCAAGCCTTTCCAGCACC
AGTCGGGCCCTGAGTATCAGTCGCTCGGTCTCCCGGGCATCGCAACGTTT
CCACGGACCCCCTCCAAGCTTCGCCCCCCGTTCGCCCTCCCACCTCGGCG
CGGCGGCCACAAGCACCGAGGTCAGGCCCACGCAGGCCGTTAAACTCCCC
AGCAATGACCAGTCCCCGAATCTGCTTCGCATTCGCCACACGTCTGCTCA
CGTGATGGCCATGGCCGTGCAGCGCCTCTTCCCCTCCGTGCAAGTGACGA
TCGGTCCCTGGATCGAGAACGGGTTTTACTACGACTTCGACACGGGGGAC
ACCAAATTTACGGAGGAGGATTTGAACAAAATCAAAAAAGAAATGGAGCG
TATCATCAAGAAACGGCTCCCGCTTCGCCGGGAGGAGGTGACGCGGGAGG
AAGCCAGGAAACGGATCGAGGCGATGCAGGAGCCGTACAAGTTGGAGATC
TTGGACGGGATCAAGACCGAGCCCATCACCATCTACCACATCGGGGACGA
ATGGTGGGATCTCTGCGCCGGGCCGCACGTGGAGTCGACCGGAGACCTCC
CCTCCAACGCCATCAAGCTTGAGTCCCTGGCAGGCGCCTACTGGCGGGGC
GACGAAAAGCGGGCCATGCTCACCCGGATCTACGGCACCGCGTGGGAGAG
CAAGGAGCAGCTTAAGGAATACCAGCGGCTGATGGAGGAGGCGAAGAAAC
GGGACCACCGGGTCTTGGGGAGGAGGCTGGATCTGTTCTCCATCCAGGAG
GACGCGGGGGGGGGGTTGGTGTTCTGGCACCCCAAGGGGGCGACCGTGCG
GAAGATTGTGGAGGACTTCTGGAAAGACGAGCACGAGCGACGTGGGTACC
AGCTTCTCTACACCCCGCACATGGCGAACCTGCAGCTCTGGAAGACGAGC
GGGCACTTTGACTTCTACAAGGAGGGCATGTTCGATCAGATGGAGGTGGA
GAACGAGGCCTTTCAGATCCGGCCCATGAACTGCCCCTTCCACTGCTTGA
TATTTAAAGACACACTGCGGAGTTACCGGGAGTTACCGATACGGTGGGCG
GAGCTGGGGACTGTGTACAGGTACGAGCGCTCCGGGACCCTGCACGGTCT
GATGCGGGTGCGAGGGTTCACGCAGGATGATGCCCACATCTTCTGCCTCC
CTTCCCAGCTCCAAGACGAGATCCGCGGCGTGCTGGACCTGGTGGAGTCC
ATCCTCTCCAAGTTCGGCTTCGTCGACTACGAGGTGATGCTCAGCACCCG
GCCCGAGAAGAGCGTGGGCAGCGAGGAGATATGGCAGGCTGCGACGGAGG
CCCTGGTGGGAGCCTTGGAGCGGAAGGGGTGGGGATACGAGGTGGACGAG
GGGGGGGGGGCGTTTTATGGGCCGAAGATCGACATCAAGATCCGAGACGC
GATAGGTGGGGAGGGTGGGGTGTAA back to topprotein sequence of rna6116 >rna6116-protein ID=rna6116-protein|Name=rna6116|organism=Nannochloropsis gaditana|type=polypeptide|length=212bp
FPPSLVTSFSPFLHLPFIPSLPFSPAGRLWQCSTIQCDFNLPERFDLEYV
ADDGSKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVT
DKAMDHAQAIKKRLSSAGFRVEVDPGSERLGKQIRNAEQARIPVMGIIGA
KEVESGGVTVRTRLGGQLGLYGVEELASGLVSAVESTKELHEVLEKRDDE
VKKEKEQEKEGV back to topmRNA from alignment at CM002467.1:612049..613409+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6116 ID=rna6116|Name=rna6116|organism=Nannochloropsis gaditana|type=mRNA|length=1361bp|location=Sequence derived from alignment at CM002467.1:612049..613409+ (Nannochloropsis gaditana)
ttccctccttccctcgttacctccttttcaccttttctccatcttccctt
cattccttcactccctttctcccctgcAGGTCGTCTCTGGCAGTGCTCCA
CCATCCAGTGTGACTTCAACCTGCCCGAGCGCTTCGATCTCGAGTACGTG
GCAGACGACGGCTCCAAGGTACGGTCTTTACCATTTCGCGTCCGGCCTTG
CAGCATCCATGCGCCTGGCTGGGTCTCAGGGCTGGCGTCAGAACCCTCTC
TctgttcctttccttcatctGAAGGCTCTGTCCGGGAGGACTGCTTTCCc
acccgttcctccctccgcccctcctggATTCTTCACAagtcttctctcct
tcctcgctcgcctctccttttcttgcctTCCGCTGCGAAAGACGTCACCc
gttctttttctcccacTTTCCCCATTGGCTTCCCTTTGGATTTTAGAAAC
GCCCCATCATGGTGCATCGGGCCATTTTCGGGTCGATTGAGCGGTTTTTC
GGCATTCTGGTCGAAAACACGGCCGGGGATTTCCCTTTGTGGATGAGTCC
GGTTCAAATGCGACTCTTGCCGGTTACGGACAAGGTAGGAAATAAGAGAG
GATTTAAAGAACGGGAGAGATACTTATAGAGGAAAGTTTGACAAGGCGGC
TCcacgtgagggaggggcgatgGCTGACTATCTCAACCTTTTCTCggcgt
ctttttctttccctagGCCATGGATCACGCCCAGGCTATCAAGAAACGCC
TTTCCAGCGCTGGTTTtagggtggaggtggatcCAGGCTCGGAACGGCTT
GGGAAACAGATCCGTAACGCGGAACAAGCACGCATTCCGGTCATGGGCAT
CATCGGCGCCAAGGTACCGTGTTGTTGggtggtcgggggggggaaggagc
gatgGCAATGCGATGAATTGTGGCGCATTAGAAAGAACTTGCTCGTGTAC
ACATATATACACGATAATCCTAGAGCTCATTGAATGGTTATTTATCACTG
TTGTTTacgcaggaggtggagagtgGGGGGGTGACCGTCCGTACTCGATT
AGGGGGACAACTCGGGCTTTATGGAGTGGAGGAATTGGCATCCGGGCTCG
TTTCAGCGGTGGAGAGCACCAAAGAACTGCACGAGGTTCTTGAAAAGCGC
GATGACGaagtgaagaaggagaaggaacaggagaaagagggggttTGAAG
ATTGGAGGGGAGAGGCCTATGGCAAAGAACAGCATTGTAGATTCAGCCAT
GaccgaggacgaggctgaACGAGGGGTGCATTATTAATTCCAGTGGCTCT
CAATAATACTTTTAGATTGCCGTCGAACAACGAAAGAATCTGATAACCTT
TTTGATAAATC back to topCoding sequence (CDS) from alignment at CM002467.1:612049..613409+ >rna6116 ID=rna6116|Name=rna6116|organism=Nannochloropsis gaditana|type=CDS|length=2556bp|location=Sequence derived from alignment at CM002467.1:612049..613409+ (Nannochloropsis gaditana)
ttccctccttccctcgttacctccttttcaccttttctccatcttccctt
cattccttcactccctttctcccctgcAGGTCGTCTCTGGCAGTGCTCCA
CCATCCAGTGTGACTTCAACCTGCCCGAGCGCTTCGATCTCGAGTACGTG
GCAGACGACGGCTCCAAGAAACGCCCCATCATGGTGCATCGGGCCATTTT
CGGGTCGATTGAGCGGTTTTTCGGCATTCTGGTCGAAAACACGGCCGGGG
ATTTCCCTTTGTGGATGAGTCCGGTTCAAATGCGACTCTTGCCGGTTACG
GACAAGGCCATGGATCACGCCCAGGCTATCAAGAAACGCCTTTCCAGCGC
TGGTTTtagggtggaggtggatcCAGGCTCGGAACGGCTTGGGAAACAGA
TCCGTAACGCGGAACAAGCACGCATTCCGGTCATGGGCATCATCGGCGCC
AAGgaggtggagagtgGGGGGGTGACCGTCCGTACTCGATTAGGGGGACA
ACTCGGGCTTTATGGAGTGGAGGAATTGGCATCCGGGCTCGTTTCAGCGG
TGGAGAGCACCAAAGAACTGCACGAGGTTCTTGAAAAGCGCGATGACGaa
gtgaagaaggagaaggaacaggagaaagagggggttTGAttccctccttc
cctcgttacctccttttcaccttttctccatcttcccttcattccttcac
tccctttctcccctgcAGGTCGTCTCTGGCAGTGCTCCACCATCCAGTGT
GACTTCAACCTGCCCGAGCGCTTCGATCTCGAGTACGTGGCAGACGACGG
CTCCAAGAAACGCCCCATCATGGTGCATCGGGCCATTTTCGGGTCGATTG
AGCGGTTTTTCGGCATTCTGGTCGAAAACACGGCCGGGGATTTCCCTTTG
TGGATGAGTCCGGTTCAAATGCGACTCTTGCCGGTTACGGACAAGGCCAT
GGATCACGCCCAGGCTATCAAGAAACGCCTTTCCAGCGCTGGTTTtaggg
tggaggtggatcCAGGCTCGGAACGGCTTGGGAAACAGATCCGTAACGCG
GAACAAGCACGCATTCCGGTCATGGGCATCATCGGCGCCAAGgaggtgga
gagtgGGGGGGTGACCGTCCGTACTCGATTAGGGGGACAACTCGGGCTTT
ATGGAGTGGAGGAATTGGCATCCGGGCTCGTTTCAGCGGTGGAGAGCACC
AAAGAACTGCACGAGGTTCTTGAAAAGCGCGATGACGaagtgaagaagga
gaaggaacaggagaaagagggggttTGAttccctccttccctcgttacct
ccttttcaccttttctccatcttcccttcattccttcactccctttctcc
cctgcAGGTCGTCTCTGGCAGTGCTCCACCATCCAGTGTGACTTCAACCT
GCCCGAGCGCTTCGATCTCGAGTACGTGGCAGACGACGGCTCCAAGAAAC
GCCCCATCATGGTGCATCGGGCCATTTTCGGGTCGATTGAGCGGTTTTTC
GGCATTCTGGTCGAAAACACGGCCGGGGATTTCCCTTTGTGGATGAGTCC
GGTTCAAATGCGACTCTTGCCGGTTACGGACAAGGCCATGGATCACGCCC
AGGCTATCAAGAAACGCCTTTCCAGCGCTGGTTTtagggtggaggtggat
cCAGGCTCGGAACGGCTTGGGAAACAGATCCGTAACGCGGAACAAGCACG
CATTCCGGTCATGGGCATCATCGGCGCCAAGgaggtggagagtgGGGGGG
TGACCGTCCGTACTCGATTAGGGGGACAACTCGGGCTTTATGGAGTGGAG
GAATTGGCATCCGGGCTCGTTTCAGCGGTGGAGAGCACCAAAGAACTGCA
CGAGGTTCTTGAAAAGCGCGATGACGaagtgaagaaggagaaggaacagg
agaaagagggggttTGAttccctccttccctcgttacctccttttcacct
tttctccatcttcccttcattccttcactccctttctcccctgcAGGTCG
TCTCTGGCAGTGCTCCACCATCCAGTGTGACTTCAACCTGCCCGAGCGCT
TCGATCTCGAGTACGTGGCAGACGACGGCTCCAAGAAACGCCCCATCATG
GTGCATCGGGCCATTTTCGGGTCGATTGAGCGGTTTTTCGGCATTCTGGT
CGAAAACACGGCCGGGGATTTCCCTTTGTGGATGAGTCCGGTTCAAATGC
GACTCTTGCCGGTTACGGACAAGGCCATGGATCACGCCCAGGCTATCAAG
AAACGCCTTTCCAGCGCTGGTTTtagggtggaggtggatcCAGGCTCGGA
ACGGCTTGGGAAACAGATCCGTAACGCGGAACAAGCACGCATTCCGGTCA
TGGGCATCATCGGCGCCAAGgaggtggagagtgGGGGGGTGACCGTCCGT
ACTCGATTAGGGGGACAACTCGGGCTTTATGGAGTGGAGGAATTGGCATC
CGGGCTCGTTTCAGCGGTGGAGAGCACCAAAGAACTGCACGAGGTTCTTG
AAAAGCGCGATGACGaagtgaagaaggagaaggaacaggagaaagagggg
gttTGA back to top
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