|
|
Properties
| Property Name | Value |
| Product | threonyl-trna synthetase |
| Orig transcript id | gnl|cribi|Naga_100062g34.902.mrna |
| Orig protein id | gnl|cribi|Naga_100062g34.902 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002467.1 | supercontig | CM002467.1:609699..611879 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6115 ID=rna6115|Name=rna6115|organism=Nannochloropsis gaditana|type=mRNA|length=1229bp CATCAAGCAGGAAGGAAACGACACAGCGTCAATCATGGCGCTGCAGGGCT CCACGGCGGACGCCCTTTTTGTCGACAGTGTGCAAAACGTGCACGTGGAA GTCCACCCGGTCGTCATCTTCGGGATCCTGGACCATTACAACCGGCGGCC GGAGCAAGGACCGGGCCAGGCGCCAGGGCGTGTGATTGGGACACTTCTGG GAACGGTGGTGGGGAATGTGGTGCAGATTCACAATGCCTTTGGCGTGCCG CATGCGGAGAACGGGAATGAAGTGGCGCTGGGGCAGGACTATCACCGGAC CATGTACGCACAATTCACCCGCATTAACGACAAGGAACGGATCGTAGGAT GGTACGCCACTACATTAGAGGAGGGTAGGGCATTGAACTCGAACAGTATC ATCATCCATGGTTTCTATGCGGGCAATTCGGACGCAGCCGGGGCTCGCCT GGTGCATCTGGTGGTGGACGCCGCGGTGGCCTCTGGACGGGTCGCGATCA AAGCCTACGTCAGCACAGCAGTACATATCAGCGGGGCACCAGTGGCGAAC ATCTTCCACCAGGTGAAGGTCCAGGTGGTGAGCACAGCCCCGGAGCGCGT GTGTCTAGACCGCATGGTTCGGGGTCAGGGCCGGGAGAAAGCCTGGTCAG AGAGCGACACTTTCGCCAAAGTGCTGCCGGGGGGGGGGGCAGTCGCGGCC CGAGAAGATCTAGAAGCTTCTGTGGCGGCCCTCTTGAAGATGCTGGAGGA GGTAATCGACTTTGTGGACCGGGTGGTGGCGGGGAAGGTGGAGGCGGACA GTGCCATAGGGTGCGAGCTGGCAGACACCCTCTCAGCGGTCCCACGGGTG CGCCCGGAGCTCTTCGACTCAATATTCAATGGGAACCTCCAAGACTTGTT GATGGTGTCGTATCTGGCGAGTCTGACGAAGGCCAACTTGGCCATCTCGG AGAAATTGAGCGGGGTACGGCACAAATAGGGAGGGAGGGAGGGAGGGAAG GGAAGGGTGAATGGAAGGAGGAAGTCATGGATTGCACAGGGAGGGAGGCG ATGGGGAGGAAAGGGGACCCGGGCAGTGCTCGGGAGTCATGGGGATGTGG TGGGAGAGCCGGGCCCGGGGGCTGGCAGTGTATGGAAGGCGTGTGGCCTG CAGGCGGTGGGGAGGGAAAATGGACGTCATAAAGTTGACACGAACGGCCA GGCCCGTAAAGAAACAGCGACGGCTTTAA back to topprotein sequence of rna6115 >rna6115-protein ID=rna6115-protein|Name=rna6115|organism=Nannochloropsis gaditana|type=polypeptide|length=550bp MEQRSGTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATS GTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSF APRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQ RLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLP LRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAG PHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEY QRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFW KDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIR PMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFT QDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGS EEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGGEGGV back to topmRNA from alignment at CM002467.1:609699..611879+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6115 ID=rna6115|Name=rna6115|organism=Nannochloropsis gaditana|type=mRNA|length=2181bp|location=Sequence derived from alignment at CM002467.1:609699..611879+ (Nannochloropsis gaditana) CATAGCAGGCGCTACAATCGAGACGCGCAACGACCACAGAGATCTGTGGT
TGGTACAAAGGGAGACGTTGTTATGGAGCAACGCAGCGGTAGGTCTTGTC
AACAAGTATCTAGCCTCCCTTCAGCCTTGAGAGCGCACCGGGAGGGTGAA
AGGCGTGTAAAAAACACGGGTCGAAGCTGACTTGCACGGTTTTCCCTCCA
CAGGCACTGCATTTCGAAAGCATCTACCCTCTGCGTcactcctccccgct
gctgGCCTGACTTTGTGGGCGCTAACAACCGGTAGCATGCTTGTACTCTC
CTCAATCGCGTGcacggcctccgcccgcgccacgAGTGGCACTCGACGTG
CCGCCCTCAACGCATTTTTACGCCCCACACTATCATCGTATCTCCCGTCA
AGCCTTTCCAGCACCAGTCGGGCCCTGAGTATCAGTCGCTCGGTCTCCCG
GGCATCGCAACGTTTCCACGGACCCCCTCCAAGCTTCGCCCCCCGttcgc
cctcccacctcggCGCGGCGGCCACAAGCACCGAGGTCAGGCCCACGCAG
GCCGTTAAACTCCCCAGCAATGACCAGTCCCCGAATCTGCTTCGCATTCG
CCACACGTCTGCTCACGTGATGGCCATGGCCGTGcagcgcctcttcccct
ccgtgcAAGTGACGATCGGTCCCTGGATCGAGAACGGGTTTTACTACGAC
TTCGACACGGGGGACACCAAATTtacggaggaggatttgAACAAAATCAA
AAAAGAAATGGAGCGTATCATCAAGAAACGGCTCCCGCTtcgccgggagg
aggtgacgcgGGAGGAAGCCAGGAAACGGATCGAGGCGATGCAGGAGCCG
TACAAGTTGGAGATCTTGGACGGGATCAAGGtgaaggggcaggaaggaaa
ggcgacAGTGgaatgagggggaaggcatCAGTttggaggcaaggggaggg
atgggatgaCAGGGACCTTTGTCTTTGAAGGGGGTCCCTCACCTGTCACG
GTGGACCCacttgccttccctctcccccccctccccctcccctcactcGT
TCCCTAGACCGAGCCCATCACCATCTACCACATCGGGGACGAATGGTGGG
ATCTCTGCGCCGGGCCGCACGTGGAGTCGACCGGAGACCTCCCCTCCAAC
GCCATCAAGCTTGAGTCCCTGGCAGGCGCCTACTGGCGGGGCGACGAAAA
GCGGGCCATGCTCACCCGGATCTACGGCACCGCgtgggagagcaaggagc
aGCTTAAGGAATACCAGCggctgatggaggaggcgaagaaacGGGACCAC
CGGGTcttggggaggaggctggatCTGTTCTCCATccaggaggacgcggg
gggggggttggtgTTCTGGCACCCCAAGGGGGCGACCGTGCGGAAGATTG
TGGAGGACTTCTGGAAAGACGAGCACGAGCGACGTGGGTACCAGCTTCTC
TACACCCCGCACATGGCGAACCTGCAGCTCTGGAAGACGAGCGGGCACTT
TGACTTCTACAAGGAGGGCATGTTCGATcagatggaggtggagaacgAGG
CCTTTCAGATCCGGCCCATGAACTGCCCCTTCCACTGCTTGATATTTAAA
GACACACTGCGGAGTTACCGGGAGTTACCGATACGGTGGGCGGAGCTGGG
GACTGTGtacaggtgggaagggagggagggaggaagggcgggaggaaagg
agggagggaggaagggaggggaggaaggtccgCCCCGGGACACTTCCTCA
CTTTGAGTGACCTGGAGCATCACCTGGCGCACCCCTTCCTATTTCGCTCC
CTGATCCCTGCCCCGACTTTGTGTAGGTACGAGCGCTCCGGGACCCTGCA
CGGTCTGATGCGGGTGCGAGGGTTCACGCAGGATGATGCCCACAtcttct
gcctcccttcccagctCCAAGACGAGATCCGCGGCGTGCTGGACCTGGTG
GAGTCCATCCTCTCCAAGTTCGGCTTCGTCGACTACGAGGTGATGCTCAG
CACCCGGCCCGAGAAGAGCGTGGGCAGCGAGGAGATATGGCAGGCTGCGA
CGGAGGCCCTGGTGGGAGCCTTGGAgcggaaggggtggggatacgaggtg
gacgagggggggggggcgtttTATGGGCCGAAGATCGACATCAAGATCCG
AGACGCGataggtggggagggtggggtgtAA back to topCoding sequence (CDS) from alignment at CM002467.1:609699..611879+ >rna6115 ID=rna6115|Name=rna6115|organism=Nannochloropsis gaditana|type=CDS|length=6612bp|location=Sequence derived from alignment at CM002467.1:609699..611879+ (Nannochloropsis gaditana) ATGGAGCAACGCAGCGGCACTGCATTTCGAAAGCATCTACCCTCTGCGTc actcctccccgctgctgGCCTGACTTTGTGGGCGCTAACAACCGGTAGCA TGCTTGTACTCTCCTCAATCGCGTGcacggcctccgcccgcgccacgAGT GGCACTCGACGTGCCGCCCTCAACGCATTTTTACGCCCCACACTATCATC GTATCTCCCGTCAAGCCTTTCCAGCACCAGTCGGGCCCTGAGTATCAGTC GCTCGGTCTCCCGGGCATCGCAACGTTTCCACGGACCCCCTCCAAGCTTC GCCCCCCGttcgccctcccacctcggCGCGGCGGCCACAAGCACCGAGGT CAGGCCCACGCAGGCCGTTAAACTCCCCAGCAATGACCAGTCCCCGAATC TGCTTCGCATTCGCCACACGTCTGCTCACGTGATGGCCATGGCCGTGcag cgcctcttcccctccgtgcAAGTGACGATCGGTCCCTGGATCGAGAACGG GTTTTACTACGACTTCGACACGGGGGACACCAAATTtacggaggaggatt tgAACAAAATCAAAAAAGAAATGGAGCGTATCATCAAGAAACGGCTCCCG CTtcgccgggaggaggtgacgcgGGAGGAAGCCAGGAAACGGATCGAGGC GATGCAGGAGCCGTACAAGTTGGAGATCTTGGACGGGATCAAGACCGAGC CCATCACCATCTACCACATCGGGGACGAATGGTGGGATCTCTGCGCCGGG CCGCACGTGGAGTCGACCGGAGACCTCCCCTCCAACGCCATCAAGCTTGA GTCCCTGGCAGGCGCCTACTGGCGGGGCGACGAAAAGCGGGCCATGCTCA CCCGGATCTACGGCACCGCgtgggagagcaaggagcaGCTTAAGGAATAC CAGCggctgatggaggaggcgaagaaacGGGACCACCGGGTcttggggag gaggctggatCTGTTCTCCATccaggaggacgcggggggggggttggtgT TCTGGCACCCCAAGGGGGCGACCGTGCGGAAGATTGTGGAGGACTTCTGG AAAGACGAGCACGAGCGACGTGGGTACCAGCTTCTCTACACCCCGCACAT GGCGAACCTGCAGCTCTGGAAGACGAGCGGGCACTTTGACTTCTACAAGG AGGGCATGTTCGATcagatggaggtggagaacgAGGCCTTTCAGATCCGG CCCATGAACTGCCCCTTCCACTGCTTGATATTTAAAGACACACTGCGGAG TTACCGGGAGTTACCGATACGGTGGGCGGAGCTGGGGACTGTGtacagGT ACGAGCGCTCCGGGACCCTGCACGGTCTGATGCGGGTGCGAGGGTTCACG CAGGATGATGCCCACAtcttctgcctcccttcccagctCCAAGACGAGAT CCGCGGCGTGCTGGACCTGGTGGAGTCCATCCTCTCCAAGTTCGGCTTCG TCGACTACGAGGTGATGCTCAGCACCCGGCCCGAGAAGAGCGTGGGCAGC GAGGAGATATGGCAGGCTGCGACGGAGGCCCTGGTGGGAGCCTTGGAgcg gaaggggtggggatacgaggtggacgagggggggggggcgtttTATGGGC CGAAGATCGACATCAAGATCCGAGACGCGataggtggggagggtggggtg tAAATGGAGCAACGCAGCGGCACTGCATTTCGAAAGCATCTACCCTCTGC GTcactcctccccgctgctgGCCTGACTTTGTGGGCGCTAACAACCGGTA GCATGCTTGTACTCTCCTCAATCGCGTGcacggcctccgcccgcgccacg AGTGGCACTCGACGTGCCGCCCTCAACGCATTTTTACGCCCCACACTATC ATCGTATCTCCCGTCAAGCCTTTCCAGCACCAGTCGGGCCCTGAGTATCA GTCGCTCGGTCTCCCGGGCATCGCAACGTTTCCACGGACCCCCTCCAAGC TTCGCCCCCCGttcgccctcccacctcggCGCGGCGGCCACAAGCACCGA GGTCAGGCCCACGCAGGCCGTTAAACTCCCCAGCAATGACCAGTCCCCGA ATCTGCTTCGCATTCGCCACACGTCTGCTCACGTGATGGCCATGGCCGTG cagcgcctcttcccctccgtgcAAGTGACGATCGGTCCCTGGATCGAGAA CGGGTTTTACTACGACTTCGACACGGGGGACACCAAATTtacggaggagg atttgAACAAAATCAAAAAAGAAATGGAGCGTATCATCAAGAAACGGCTC CCGCTtcgccgggaggaggtgacgcgGGAGGAAGCCAGGAAACGGATCGA GGCGATGCAGGAGCCGTACAAGTTGGAGATCTTGGACGGGATCAAGACCG AGCCCATCACCATCTACCACATCGGGGACGAATGGTGGGATCTCTGCGCC GGGCCGCACGTGGAGTCGACCGGAGACCTCCCCTCCAACGCCATCAAGCT TGAGTCCCTGGCAGGCGCCTACTGGCGGGGCGACGAAAAGCGGGCCATGC TCACCCGGATCTACGGCACCGCgtgggagagcaaggagcaGCTTAAGGAA TACCAGCggctgatggaggaggcgaagaaacGGGACCACCGGGTcttggg gaggaggctggatCTGTTCTCCATccaggaggacgcggggggggggttgg tgTTCTGGCACCCCAAGGGGGCGACCGTGCGGAAGATTGTGGAGGACTTC TGGAAAGACGAGCACGAGCGACGTGGGTACCAGCTTCTCTACACCCCGCA CATGGCGAACCTGCAGCTCTGGAAGACGAGCGGGCACTTTGACTTCTACA AGGAGGGCATGTTCGATcagatggaggtggagaacgAGGCCTTTCAGATC CGGCCCATGAACTGCCCCTTCCACTGCTTGATATTTAAAGACACACTGCG GAGTTACCGGGAGTTACCGATACGGTGGGCGGAGCTGGGGACTGTGtaca gGTACGAGCGCTCCGGGACCCTGCACGGTCTGATGCGGGTGCGAGGGTTC ACGCAGGATGATGCCCACAtcttctgcctcccttcccagctCCAAGACGA GATCCGCGGCGTGCTGGACCTGGTGGAGTCCATCCTCTCCAAGTTCGGCT TCGTCGACTACGAGGTGATGCTCAGCACCCGGCCCGAGAAGAGCGTGGGC AGCGAGGAGATATGGCAGGCTGCGACGGAGGCCCTGGTGGGAGCCTTGGA gcggaaggggtggggatacgaggtggacgagggggggggggcgtttTATG GGCCGAAGATCGACATCAAGATCCGAGACGCGataggtggggagggtggg gtgtAAATGGAGCAACGCAGCGGCACTGCATTTCGAAAGCATCTACCCTC TGCGTcactcctccccgctgctgGCCTGACTTTGTGGGCGCTAACAACCG GTAGCATGCTTGTACTCTCCTCAATCGCGTGcacggcctccgcccgcgcc acgAGTGGCACTCGACGTGCCGCCCTCAACGCATTTTTACGCCCCACACT ATCATCGTATCTCCCGTCAAGCCTTTCCAGCACCAGTCGGGCCCTGAGTA TCAGTCGCTCGGTCTCCCGGGCATCGCAACGTTTCCACGGACCCCCTCCA AGCTTCGCCCCCCGttcgccctcccacctcggCGCGGCGGCCACAAGCAC CGAGGTCAGGCCCACGCAGGCCGTTAAACTCCCCAGCAATGACCAGTCCC CGAATCTGCTTCGCATTCGCCACACGTCTGCTCACGTGATGGCCATGGCC GTGcagcgcctcttcccctccgtgcAAGTGACGATCGGTCCCTGGATCGA GAACGGGTTTTACTACGACTTCGACACGGGGGACACCAAATTtacggagg aggatttgAACAAAATCAAAAAAGAAATGGAGCGTATCATCAAGAAACGG CTCCCGCTtcgccgggaggaggtgacgcgGGAGGAAGCCAGGAAACGGAT CGAGGCGATGCAGGAGCCGTACAAGTTGGAGATCTTGGACGGGATCAAGA CCGAGCCCATCACCATCTACCACATCGGGGACGAATGGTGGGATCTCTGC GCCGGGCCGCACGTGGAGTCGACCGGAGACCTCCCCTCCAACGCCATCAA GCTTGAGTCCCTGGCAGGCGCCTACTGGCGGGGCGACGAAAAGCGGGCCA TGCTCACCCGGATCTACGGCACCGCgtgggagagcaaggagcaGCTTAAG GAATACCAGCggctgatggaggaggcgaagaaacGGGACCACCGGGTctt ggggaggaggctggatCTGTTCTCCATccaggaggacgcggggggggggt tggtgTTCTGGCACCCCAAGGGGGCGACCGTGCGGAAGATTGTGGAGGAC TTCTGGAAAGACGAGCACGAGCGACGTGGGTACCAGCTTCTCTACACCCC GCACATGGCGAACCTGCAGCTCTGGAAGACGAGCGGGCACTTTGACTTCT ACAAGGAGGGCATGTTCGATcagatggaggtggagaacgAGGCCTTTCAG ATCCGGCCCATGAACTGCCCCTTCCACTGCTTGATATTTAAAGACACACT GCGGAGTTACCGGGAGTTACCGATACGGTGGGCGGAGCTGGGGACTGTGt acagGTACGAGCGCTCCGGGACCCTGCACGGTCTGATGCGGGTGCGAGGG TTCACGCAGGATGATGCCCACAtcttctgcctcccttcccagctCCAAGA CGAGATCCGCGGCGTGCTGGACCTGGTGGAGTCCATCCTCTCCAAGTTCG GCTTCGTCGACTACGAGGTGATGCTCAGCACCCGGCCCGAGAAGAGCGTG GGCAGCGAGGAGATATGGCAGGCTGCGACGGAGGCCCTGGTGGGAGCCTT GGAgcggaaggggtggggatacgaggtggacgagggggggggggcgtttT ATGGGCCGAAGATCGACATCAAGATCCGAGACGCGataggtggggagggt ggggtgtAAATGGAGCAACGCAGCGGCACTGCATTTCGAAAGCATCTACC CTCTGCGTcactcctccccgctgctgGCCTGACTTTGTGGGCGCTAACAA CCGGTAGCATGCTTGTACTCTCCTCAATCGCGTGcacggcctccgcccgc gccacgAGTGGCACTCGACGTGCCGCCCTCAACGCATTTTTACGCCCCAC ACTATCATCGTATCTCCCGTCAAGCCTTTCCAGCACCAGTCGGGCCCTGA GTATCAGTCGCTCGGTCTCCCGGGCATCGCAACGTTTCCACGGACCCCCT CCAAGCTTCGCCCCCCGttcgccctcccacctcggCGCGGCGGCCACAAG CACCGAGGTCAGGCCCACGCAGGCCGTTAAACTCCCCAGCAATGACCAGT CCCCGAATCTGCTTCGCATTCGCCACACGTCTGCTCACGTGATGGCCATG GCCGTGcagcgcctcttcccctccgtgcAAGTGACGATCGGTCCCTGGAT CGAGAACGGGTTTTACTACGACTTCGACACGGGGGACACCAAATTtacgg aggaggatttgAACAAAATCAAAAAAGAAATGGAGCGTATCATCAAGAAA CGGCTCCCGCTtcgccgggaggaggtgacgcgGGAGGAAGCCAGGAAACG GATCGAGGCGATGCAGGAGCCGTACAAGTTGGAGATCTTGGACGGGATCA AGACCGAGCCCATCACCATCTACCACATCGGGGACGAATGGTGGGATCTC TGCGCCGGGCCGCACGTGGAGTCGACCGGAGACCTCCCCTCCAACGCCAT CAAGCTTGAGTCCCTGGCAGGCGCCTACTGGCGGGGCGACGAAAAGCGGG CCATGCTCACCCGGATCTACGGCACCGCgtgggagagcaaggagcaGCTT AAGGAATACCAGCggctgatggaggaggcgaagaaacGGGACCACCGGGT cttggggaggaggctggatCTGTTCTCCATccaggaggacgcgggggggg ggttggtgTTCTGGCACCCCAAGGGGGCGACCGTGCGGAAGATTGTGGAG GACTTCTGGAAAGACGAGCACGAGCGACGTGGGTACCAGCTTCTCTACAC CCCGCACATGGCGAACCTGCAGCTCTGGAAGACGAGCGGGCACTTTGACT TCTACAAGGAGGGCATGTTCGATcagatggaggtggagaacgAGGCCTTT CAGATCCGGCCCATGAACTGCCCCTTCCACTGCTTGATATTTAAAGACAC ACTGCGGAGTTACCGGGAGTTACCGATACGGTGGGCGGAGCTGGGGACTG TGtacagGTACGAGCGCTCCGGGACCCTGCACGGTCTGATGCGGGTGCGA GGGTTCACGCAGGATGATGCCCACAtcttctgcctcccttcccagctCCA AGACGAGATCCGCGGCGTGCTGGACCTGGTGGAGTCCATCCTCTCCAAGT TCGGCTTCGTCGACTACGAGGTGATGCTCAGCACCCGGCCCGAGAAGAGC GTGGGCAGCGAGGAGATATGGCAGGCTGCGACGGAGGCCCTGGTGGGAGC CTTGGAgcggaaggggtggggatacgaggtggacgagggggggggggcgt ttTATGGGCCGAAGATCGACATCAAGATCCGAGACGCGataggtggggag ggtggggtgtAA back to top
|