EWM24579.1, cds6100 (CDS) Nannochloropsis gaditana

Overview
NameEWM24579.1
Unique Namecds6100
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:609771..609786 +
Alignment locationCM002467.1:609902..610578 +
Alignment locationCM002467.1:610756..611360 +
Alignment locationCM002467.1:611525..611879 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24579.1
Productthreonyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100062g34.902.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:609771..609786 +
CM002467.1supercontigCM002467.1:609902..610578 +
CM002467.1supercontigCM002467.1:610756..611360 +
CM002467.1supercontigCM002467.1:611525..611879 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0043039tRNA aminoacylation
GO:0006435threonyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0004829threonine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR018163Thr/Ala-tRNA-synth_IIc_edit
IPR006195aa-tRNA-synth_II
IPR002314aa-tRNA-synt_IIb_cons-dom
IPR012947tRNA_SAD
IPR002320Thr-tRNA-ligase_IIa
Homology
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|585106095|gb|EWM24579.1| (threonyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1137.87 bits (2942), Expect = 0.000e+0
Identity = 550/550 (100.00%), Postives = 550/550 (100.00%), Query Frame = 0
Query:    1 MEQRSGTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATSGTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGGEGGV 550
            MEQRSGTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATSGTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGGEGGV
Sbjct:    1 MEQRSGTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATSGTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGGEGGV 550          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|553190379|ref|XP_005855179.1| (threonyl-tRNA synthetase, partial [Nannochloropsis gaditana CCMP526] >gi|422293882|gb|EKU21182.1| threonyl-tRNA synthetase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 499/501 (99.60%), Postives = 501/501 (100.00%), Query Frame = 0
Query:    6 GTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATSGTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQA 506
            GTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATSGTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQL+EYQRLMEEAKKRDHRVLGR+LDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQA
Sbjct:  504 GTAFRKHLPSASLLPAAGLTLWALTTGSMLVLSSIACTASARATSGTRRAALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLQEYQRLMEEAKKRDHRVLGRKLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQA 1004          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|1210521803|dbj|GAX19238.1| (threonyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 315/452 (69.69%), Postives = 383/452 (84.73%), Query Frame = 0
Query:  106 SHLGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            S L   A  +E    + V+LP+N+    LL+IRH+SAHVMAMAVQ++FP  QVTIGPWI+NGFYYDF        +TG+T    K TE+DL  +KKEM++II K  P+RREEV+REEA++RI  + EP+KLEILD IKTEPITIYHIG+EWWDLCAGPHVEST  +P  AI L+S+AGAYWRGDEKR ML RIY TAW+  +QLK+Y++++EEAKKRDHR+LG++LDLFS+QE+AGGGLVFWHPKG+ +R+++EDFWK+ HE  GY ++Y+PH+AN+ LWKTSGHFDFY+  MFDQM+VENE +QI+PMNCPFHCL+FKD LRSYR+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL+DEI GVLDL E ILS+FGF  Y++MLST+PEK+VGS++IW+AAT+AL GAL++KGW Y VDEGGGAFYGPKID+KIRDAIG
Sbjct:   14 STLAPPAEQSEAE--EIVQLPTNEDDEELLKIRHSSAHVMAMAVQQVFPEAQVTIGPWIDNGFYYDFYFPETVNKETGETVPSRKLTEQDLKAVKKEMDKIISKDYPIRREEVSREEAQRRINEINEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTSRIPKKAISLDSVAGAYWRGDEKREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSVQEEAGGGLVFWHPKGSKIRRMIEDFWKNAHEDAGYDIVYSPHIANINLWKTSGHFDFYRSDMFDQMDVENEQYQIKPMNCPFHCLMFKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGVDEGGGAFYGPKIDLKIRDAIG 463          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|1210518432|dbj|GAX22709.1| (threonyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 694.115 bits (1790), Expect = 0.000e+0
Identity = 315/457 (68.93%), Postives = 381/457 (83.37%), Query Frame = 0
Query:  102 PRSPSHLGAAATSTE-VRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDT------------KFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            P +   L   A  TE     + ++LP+N+    LL+IRH+SAHVMAMAVQ++FP  QVTIGPWI+NGFYYDF   DT            K TE+DL  +KKEM++II K  P+RREEV+REEAR+RI  + EP+KLEILD IKTEPITIYHIG+EWWDLCAGPHVEST  +P  AI L+S+AGAYWRGDEKR ML RIY TAW+  +QLK+Y++++EEAKKRDHR+LG++LDLFS+QE+AGGGLVFWHPKG+ +R+++EDFWK+ HE  GY ++Y+PH+AN+ LWKTSGHFDFY+  MFDQM+VENE +QI+PMNCPFHCL+FKD LRSYR+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL+DEI GVLDL E ILS+FGF  Y++MLST+PEK+VGS++IW+AAT+AL GAL++KGW Y VDEGGGAFYGPKID+KIRDAIG
Sbjct:   43 PLTRHFLSTLAPPTEQSEAEEIIQLPTNEDDEELLKIRHSSAHVMAMAVQQVFPEAQVTIGPWIDNGFYYDFYFPDTVDKETGEKVPSRKLTEQDLKAVKKEMDKIISKDYPIRREEVSREEARRRINEIGEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTSSIPKKAISLDSVAGAYWRGDEKREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSVQEEAGGGLVFWHPKGSKIRRMIEDFWKNAHEDAGYDIVYSPHIANINLWKTSGHFDFYRSDMFDQMDVENEQYQIKPMNCPFHCLMFKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGVDEGGGAFYGPKIDLKIRDAIG 499          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|219113189|ref|XP_002186178.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583028|gb|ACI65648.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0
Identity = 315/432 (72.92%), Postives = 372/432 (86.11%), Query Frame = 0
Query:  126 PSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            P+ND    LLRIRH+SAHVMAMAVQR+FP  QVTIGPWI++GFYYDF        ++G+T    K +E+DL  +KK M++II K  P+ RE+V+REEAR+RIE + EP+KLEILD IKTEPIT+YHIGDEWWDLCAGPHV+STG LP  AI+L+S+AGAYWRGDE R ML RIY TAW+  +QLK+Y++++EEAKKRDHR+LG++LDLFSIQEDAGGGLVFWHPKG+ VR+++EDFWKD H + GY ++Y+PH+AN+ LWKTSGHFDFY+  MFDQM+VENE +QI+PMNCPFHCL++KD LRSYR+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QLQDEI GVLDL E+ILS+FGF  Y+VMLSTRPEKSVGS+EIW AAT AL GAL+ KGW Y VDEGGGAFYGPKID+KIRDAIG
Sbjct:   74 PTNDNDEELLRIRHSSAHVMAMAVQRIFPEAQVTIGPWIDSGFYYDFFFPERTDEESGETIPARKLSEQDLKDVKKAMDKIIGKDYPISREDVSREEARRRIEKIGEPFKLEILDSIKTEPITLYHIGDEWWDLCAGPHVDSTGKLPKKAIQLQSVAGAYWRGDENREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHIQDGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALKVKGWDYNVDEGGGAFYGPKIDLKIRDAIG 505          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|1189389443|gb|OSX76429.1| (hypothetical protein BU14_0191s0009 [Porphyra umbilicalis])

HSP 1 Score: 679.863 bits (1753), Expect = 0.000e+0
Identity = 325/483 (67.29%), Postives = 389/483 (80.54%), Query Frame = 0
Query:   66 SSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAA---ATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            S++ P  LS  S A S +R    A+ R      S   RS   + AA   AT     P   V+LP+N+ S  LLRIRH+++HVMAMAVQ LFP+ +VTIGPWI+NGFYYDFD  +  F++ DL  IKKEM++IIK++LPLRREE++R EA++RI+A+ E YKLEILD IK+EPIT+YH+GDEWWDLCAGPHVE TG++ + A+ LES+AGAYWRGDE +A L RIYGTAWES +QLKEY+R+ EEAK+RDHR+LG +L LFSIQEDAGGGLVFWH KGA VR+I+EDFWKD H   GY+LL TPH+AN  LWKTSGH DFY++ MFDQM+VE E +Q++PMNCPFHCLIF+D LRSYRELP+RWAELGTVYR+ERSGTLHGLMRVRGFTQDDAHIFCLP QL  EI  VLDL E+IL +FGFV+YE+MLSTRPEKSVGS++IW  AT AL  AL+ K W Y VD+GGGAFYGPKID+KIRDAIG
Sbjct:   20 STWRPGPLSQWSSASSSARHCLPAAVR----SSSLQKRSSPLMTAAVTTATPVSSEPPPPVRLPTNESSERLLRIRHSTSHVMAMAVQNLFPNAKVTIGPWIDNGFYYDFDV-EEPFSDADLKAIKKEMDKIIKRKLPLRREELSRSEAQERIQALGESYKLEILDSIKSEPITLYHLGDEWWDLCAGPHVEHTGEINAKAVALESVAGAYWRGDETKATLQRIYGTAWESPDQLKEYKRMKEEAKRRDHRMLGPKLGLFSIQEDAGGGLVFWHAKGARVRRIIEDFWKDAHVAAGYELLVTPHVANAALWKTSGHLDFYQDSMFDQMDVEGEQYQLKPMNCPFHCLIFRDGLRSYRELPLRWAELGTVYRFERSGTLHGLMRVRGFTQDDAHIFCLPDQLAPEIERVLDLTENILGRFGFVEYEIMLSTRPEKSVGSDDIWDKATAALRAALDAKDWAYSVDDGGGAFYGPKIDVKIRDAIG 497          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|551632821|ref|XP_005819275.1| (threonyl-tRNA synthetase [Guillardia theta CCMP2712] >gi|428163211|gb|EKX32295.1| threonyl-tRNA synthetase [Guillardia theta CCMP2712])

HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0
Identity = 304/439 (69.25%), Postives = 371/439 (84.51%), Query Frame = 0
Query:  108 LGAAATSTEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGI-KTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            +  ++   E + T+ V LP+ND+SP L++IRH+SAH+MAMAVQRLFP  QVTIGPWIENGF+YDFD     F E+DL  I+KEM++II K+LP+ RE V+REEARKRIEA +EPYKLE+LD I + E I+IYHIG+EWWDLCAGPHVE+TGD+   A+KLE ++GAYWRGDE +A L RIYGTAWE+++QLK YQ ++EEAK+RDHR LG+ +DLFSIQE AGGGLVFWHPKG  +R I+E FWKD H R GY+L+Y+PH+AN++LWK SGHF+FY E MFDQM+VE E +QI+PMNCPFH L++K+T RSYR+LPIRWAELGTVYRYERSGTL GL RVRGFTQDDAH+FCLP Q++DEI  +LDL ES+LSKFGF +YE+ LSTRPEKS+GS++IW  AT AL+ ALERKGW Y VDEGGGAFYGPKID+KIRDA+G
Sbjct:    6 VATSSKQEESKETEFVPLPTNDESPGLVKIRHSSAHIMAMAVQRLFPKAQVTIGPWIENGFFYDFDLQGGSFEEKDLKAIQKEMQKIINKKLPIWREVVSREEARKRIEAQKEPYKLELLDAIPEGEDISIYHIGEEWWDLCAGPHVETTGDISGKALKLERVSGAYWRGDETKASLQRIYGTAWENEDQLKSYQHMIEEAKRRDHRKLGQEMDLFSIQEKAGGGLVFWHPKGGRMRNIIESFWKDLHMRSGYELVYSPHIANVELWKQSGHFEFYSESMFDQMDVEEEVYQIKPMNCPFHVLMYKNTKRSYRQLPIRWAELGTVYRYERSGTLSGLFRVRGFTQDDAHVFCLPDQVEDEILKILDLTESVLSKFGFTNYEINLSTRPEKSIGSDDIWDLATSALIKALERKGWSYAVDEGGGAFYGPKIDLKIRDALG 444          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|1072225858|gb|OEU10603.1| (threonyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 309/434 (71.20%), Postives = 368/434 (84.79%), Query Frame = 0
Query:  124 KLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            +LP+N+    LLRIRH+S HVMAMAVQ+LFP  Q TIGPWI+NGFYYDF        +TG+T    K + +DL K+KK+M++II K  P+ REE+TREEA +RI+ + EP+KLEIL+G+  EPITIYHIGDEWWDLCAGPHVEST  +P  AI L+S+AGAYWRGDE R ML RIY T W+   QLK Y++++EEAKKRDHR+LG++LDLFSIQE AGGGLVFWHPKG+ VRKI+ED+WKD H + GY ++YTPH+ANL LWKTSGHFDFYK+ MFDQMEVENE +QI+PMNCPFHCL++K+ LRSYR+LPIRW ELGTVYRYERSGTLHGL RVRGFTQDDAHIFCLP+QL+DEI  VLDL ESIL+KFGF  Y+VMLSTRPEK+VGS++IW+AAT+AL GAL RKGW Y++DEGGGAFYGPKID+KIRDAIG
Sbjct:   20 ELPTNENDGELLRIRHSSGHVMAMAVQKLFPEAQTTIGPWIDNGFYYDFYFPETIDAETGETIESRKLSTDDLKKVKKQMDKIISKNYPITREEITREEAERRIKEINEPFKLEILEGL-VEPITIYHIGDEWWDLCAGPHVESTNQIPKKAIALQSVAGAYWRGDENREMLQRIYATGWKDPMQLKRYKKMLEEAKKRDHRMLGKKLDLFSIQEGAGGGLVFWHPKGSKVRKIIEDYWKDAHAKDGYDVIYTPHIANLDLWKTSGHFDFYKDDMFDQMEVENEQYQIKPMNCPFHCLMYKNELRSYRDLPIRWGELGTVYRYERSGTLHGLFRVRGFTQDDAHIFCLPTQLEDEIVQVLDLTESILTKFGFDKYDVMLSTRPEKAVGSDDIWEAATKALEGALVRKGWPYKIDEGGGAFYGPKIDLKIRDAIG 452          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|397611615|gb|EJK61406.1| (hypothetical protein THAOC_18112, partial [Thalassiosira oceanica])

HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0
Identity = 328/522 (62.84%), Postives = 397/522 (76.05%), Query Frame = 0
Query:   56 ALNAFLRPTLSSYLPSSLSSTSRALSISRSVSRASQRFHGPPPSFAPRSPSHLGAAATSTE--------------VRPTQ------AVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
            A++A L  + S++LPS    T+R LS   S  R   R      + APR+  +  A     E              V P        A +LP+N+   +LL+IRH+S+HVMAMAVQ+ FP  QVTIGPWI+NGFYYDF        +TG+T    K T++DL K+KK M++II K  P+ R E+TR+EAR+RIE + EP+KLEILD IKTEPITIY IGDEWWDLCAGPHVESTG LP  AI+L+S+AGAYWRGDEKR ML RIY TAW+  +QLK Y++LMEEAKKRDHR+LG++LDLFSIQEDAGGGLVFWHPKG+ +R  +EDFWK +H   GY L+Y+PH+ANL LWKTSGHFDFY +GMFDQM VE+E +QI+PMNCPFHCL++KD +RSYR+LP RWAELGTVYRYERSGTLHGL RVRGFTQDDAH+FCLP QLQDEI  VL L +SILS+FGF  YE+M+STRPEKSVGS++IW+AA  AL G+L+  GW Y +DEGGGAFYGPKID+KI+DAIG
Sbjct:   22 AMSAMLLRSASAFLPSVTRRTAR-LSGGASTRRLPSR------AVAPRTGLYSTAVTKEEETTAAPVNGSGRRIKVLPPSPADEQPAEELPTNENDEDLLKIRHSSSHVMAMAVQQAFPEAQVTIGPWIDNGFYYDFYFPETVDEETGETIPSRKLTDQDLKKVKKAMDKIISKNYPIERIELTRDEARERIEKLGEPFKLEILDSIKTEPITIYTIGDEWWDLCAGPHVESTGKLPKKAIQLQSVAGAYWRGDEKREMLQRIYATAWKDPKQLKAYKKLMEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSVIRTKMEDFWKQQHIDAGYDLVYSPHIANLDLWKTSGHFDFYADGMFDQMAVEDETYQIKPMNCPFHCLMYKDDIRSYRDLPFRWAELGTVYRYERSGTLHGLFRVRGFTQDDAHVFCLPDQLQDEIVDVLKLTKSILSRFGFDKYELMISTRPEKSVGSDDIWEAAESALRGSLDELGWDYGLDEGGGAFYGPKIDLKIKDAIG 536          
BLAST of EWM24579.1 vs. NCBI_GenBank
Match: gi|168027962|ref|XP_001766498.1| (predicted protein [Physcomitrella patens] >gi|162682407|gb|EDQ68826.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 309/426 (72.54%), Postives = 360/426 (84.51%), Query Frame = 0
Query:  120 TQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545
             + + LP+N+ S NL++IRHT+AHV+AMAVQ+LFP  QVTIGPWIE GFYYDFD  +  FTE+DL KIKKEM+RII + LPL REEV+REEA +RI+A+ EPYKLEIL+GIK+EPITIY IG++WWDLCAGPHVE TG L   AI+LES+AGAYWRGDEK  ML R+YGTAWE++EQLK YQ   EEAK+RDHR LG+ L+LFSIQEDAGGGLVFWHPKGA +R I+ED+WK  H   GY+LLYTPH+A L LWKTSGH+DFYKE MFDQM++E E +QIRPMNCPFH  ++KD LRSYRELP+R AELGTVYRYERSGTLHGL RVRGFTQDD HIFCLP Q++DEIRGVLDL E IL +FGF  +E+ LSTRPEK+VGS+EIW+ AT AL  ALE KGW Y +DEGGGAFYGPKID+KI DAIG
Sbjct:   29 NKIIVLPTNESSENLVKIRHTTAHVLAMAVQKLFPEAQVTIGPWIEKGFYYDFDMKEA-FTEKDLKKIKKEMDRIISRNLPLVREEVSREEAERRIKAINEPYKLEILEGIKSEPITIYRIGEDWWDLCAGPHVERTGQLNKRAIELESVAGAYWRGDEKNQMLQRVYGTAWETEEQLKAYQVQKEEAKRRDHRRLGQDLNLFSIQEDAGGGLVFWHPKGAMIRHIIEDYWKKMHFANGYELLYTPHIAKLDLWKTSGHYDFYKENMFDQMQIEEELYQIRPMNCPFHIQVYKDALRSYRELPMRVAELGTVYRYERSGTLHGLFRVRGFTQDDGHIFCLPDQIRDEIRGVLDLTEMILKQFGFSKFEINLSTRPEKAVGSDEIWEKATTALKSALEDKGWEYGIDEGGGAFYGPKIDVKIEDAIG 453          
The following BLAST results are available for this feature:
BLAST of EWM24579.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106095|gb|EWM24579.1|0.000e+0100.00threonyl-trna synthetase [Nannochloropsis gaditana... [more]
gi|553190379|ref|XP_005855179.1|0.000e+099.60threonyl-tRNA synthetase, partial [Nannochloropsis... [more]
gi|1210521803|dbj|GAX19238.1|0.000e+069.69threonyl-tRNA synthetase [Fistulifera solaris][more]
gi|1210518432|dbj|GAX22709.1|0.000e+068.93threonyl-tRNA synthetase [Fistulifera solaris][more]
gi|219113189|ref|XP_002186178.1|0.000e+072.92predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1189389443|gb|OSX76429.1|0.000e+067.29hypothetical protein BU14_0191s0009 [Porphyra umbi... [more]
gi|551632821|ref|XP_005819275.1|0.000e+069.25threonyl-tRNA synthetase [Guillardia theta CCMP271... [more]
gi|1072225858|gb|OEU10603.1|0.000e+071.20threonyl-tRNA synthetase [Fragilariopsis cylindrus... [more]
gi|397611615|gb|EJK61406.1|0.000e+062.84hypothetical protein THAOC_18112, partial [Thalass... [more]
gi|168027962|ref|XP_001766498.1|0.000e+072.54predicted protein [Physcomitrella patens] >gi|1626... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6115rna6115Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications