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Properties
| Property Name | Value |
|---|
| Product | Basic-leucine zipper domain protein |
| Orig transcript id | gnl|cribi|Naga_100062g17.915.mrna |
| Orig protein id | gnl|cribi|Naga_100062g17.915 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:566909..569686 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6100 ID=rna6100|Name=rna6100|organism=Nannochloropsis gaditana|type=mRNA|length=1563bp
GCGGTGGGAAAGAGGTAAATTGTATTATATATCGTTGGAACATATTAATA
ACTATGCATTTAATTAGATTTTTGGATATGTGAATTCCTCTTGAATCGAT
GTATGGACTGCATCCGTACAGTTAGGTTTCGGCCTATCCGCAAAGTTTTG
GCGCGAGTGATGTGTTCTGCGGTTTGGAATATACGAGAAGGTTCATCGTA
GTACTTCGACATCGAAAATCTGTTTTCACCGAAAGATTCAGTTTGCCTTT
CACTCCAGTTGTAAAGACTACAATGTATGGTAGTTATATGTGGTTCAGAC
TAACACCTTTATCTTCTTATCTTGCGCATGTCTCTACGGACCAACCTCCC
CCTAGTTTGTCTGAGTCATGCCTCACGGACATATTTCACTGCAACCTTTC
GGCCTATGTGCTGCGGCTGCATTCGCGGTGACCACCACGCAAGGGTTTGT
CCCGCCCATTACCCCAGCGACAAGCCATGCAGGCTCTTGTGTGTGTTTTT
CTGCACCTTCTCCATCTGTGTCGATTGCCCCTACGCCGCCTACAAACCCA
GCAGAGGCCAGTCCAATCGACGCGCATGAGCTGCGCGGGGTCCTTAAAGA
TGCACTGTATCGCAGCCTAGGGAACGAAGCGACGACATCTTCAAGAGCGG
AAAATTATGACGCTATGGAGCACGTTTTGGCCTGCCCGCTGACATTGAAG
CCCCTACGGCGAGTGGTCCGCCTCGCCGGCCCGTTTGGTCAAGTGGTGAA
CATGGTCACAACTCGCGGCAACAAATATCCTGCGAACGAGGTGTACATGG
ATCTTGTTCCCGCAGAAGAACGAATGCAAGTGCCTTTCTTTTCTCCCTCG
GCCATTGTCACCCAAGAGTTGTTTCGTTCCCCTCTCACATCCTTCCTGTA
CGAGCGAGGATGGCGGGACAACTTCAAGACCGCGGGCTTTCCTGGCATCG
ACGAGGAATTCAGAGACCTGGAGGCTTTTTTCGCCCCGCTATCCGATGCG
GGATCTGAATCCGAGCGTGAGGGTGAGCAGCAGCGAAGGAGTGGTCGGGG
GACTGTGATCGATCTGAGTTGTGGGAGCGGCCTTACGGCCCGGCGCCTGT
GCCGGTCGCGGAAATGGAAACGGGTCATCGCGGCAGATTTCAGCGAGTCC
ATGCTGCGAGAGACTCGGCGACGTTTCCTGGAAGAGAAGTTACCAGTGCC
GGAGCTGGTGCGAGCGGACGCGTCCCGACAACCGTTTCAGACGTCGAGTG
TTGATGCCATCCACGCGGGTGCGGCCTTGCATTGCTGGCCTCGGTTGGAA
GAAAGCCTGCGGGAATGCCTCCGGGTACTCAAACCAGGTGGGAGGATGTA
CGCGTCAACGTTTGAAGTGAATGAACGGCTTCAGAGTAATACGTTTCGGT
TTTTCCAGTTGGATGAGTTGCGGCGCTTGTTTGTGTCGAGTGGATTTGTG
GAGGTTGAGGTCAGGAGGGAGGGGGTGGCTTGTTTAATAGTGAAGGCTGT
GAAAGCCATGGACAGCGGAGGAAGGCAGTAGCAGCTACAAAGAAATAATG
TTGTCTGACTATT back to topprotein sequence of rna6100 >rna6100-protein ID=rna6100-protein|Name=rna6100|organism=Nannochloropsis gaditana|type=polypeptide|length=411bp
MSAHNAASSADLRGESKGGLDGGVRNMHAHAVRTHPHMSSSTSNEGSFVS
TSSSKDGRTDDESLSDGSRSPSSSSLSSASCASSTTMTANAPAYKPRSRM
EKMMHMSQQQQYQDHEDRLEEEEKALAAAAVIASVRHEDPTVWQGNKKAV
ARASPSHPLSSAPSAAPRPAPAPGSPTYALDVTRRGAVPSQSGGSGVDSR
PEPEKPTGFPPSLPVDACHAAADSLVSMFPQVGSFSSTLASKTAKDSGWS
DHGREGKSNPSAPAPSSASSAPTMSRNSSFCSVDEFEPTEEQKATMTKKE
LRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQTTYG
ELHLASDGMQGVGRSISQENLQMGHGDGDKQGHTREAGRRAESRAPRIQD
NRADEEEEDED back to topmRNA from alignment at CM002467.1:566909..569686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6100 ID=rna6100|Name=rna6100|organism=Nannochloropsis gaditana|type=mRNA|length=2778bp|location=Sequence derived from alignment at CM002467.1:566909..569686+ (Nannochloropsis gaditana)
GCCTGATGACGATGCTAGCTCTCGCCCACACCACGCACCTTTGTTCCACC
TCCAGGCCAGCACCACTCCTGGCATGAAGTGTTGGGCCGCGTGTTTCGCA
GCGTATAGCAGAAAGCTATTGCGATGGAATGAGAGAGACTTGGACTGGTG
GTGGGCGCTATGCTTTGTCGCGGTGTCGAGGGTAAAAAAAACAGGCGGCC
AAGATCCATAGTGCACCTGCCAGCTCCTGCTCGCCACCTAGGCAACTCCC
AAATTTGTAGCTGCATCCATATCAGTACATGATTTGTAGATTTTCCATCT
TCTGGCCTGTGCTTGAACAGAGAACTCAGTAATGGAACACTAAGTTTGTG
TTTTTGGATATGCAGGTCTCGACCTTATGCCCCCTTTGACGTGGATGTGC
GCCAGCTGCCACGCAATCTGTAGGATCTGTCGTATTACGCAAGCCTCTTC
GCTTCGAAATAAGTCATAGTACTCACCTTACCGTGCGCTTTCGAACAGAA
CCATGTCTGCACACAAtgcggcctcctcggccgacCTTCGAGGAGAATCC
AAAGGGGGACTAGACGGGGGCGTCCGCAACATGCATGCGCACGCCGTGCG
GACACACCCTCACATGTCATCCTCCACGTCTAACGAAGGCAGTTTTGTca
gcacaagcagcagcaaggatGGCCGCACGGATGACGAATCTCTCTCGGAT
GGCAGCCGGAGCCCGTCGTCAAGCTCCTTGTCGTCCGCTTCCTGCGCGTC
GTCCACCACCATGACAGCGAACGCTCCTGCCTACAAGCCGAGGTCGCGGA
TGGAGAAAATGATGCACATGtcccagcagcagcaatatCAAGACCACGAA
GACAggctcgaagaggaagaaaaagctCTTGCCGCGGCCGCTGTCATTGC
CTCTGTTAGGCATGAGGACCCCACGGTGTGGCAAGGGAATAAGAAGGCAG
TAGCCCGCGCATCCCCCTCGCATCCCCtgtcctcggcgccctcggccgcc
ccCAGACCTGCGCCAGCTCCAGGATCACCTACTTATGCCTTGGACGTGAC
GCGAAGAGGCGCTGTTCCCAGTCAATCGGGTGGCTCGGGAGTTGACAGCC
GGCCCGAACCGGAGAAGCCCaccggcttccccccctccctgccggtCGAC
GCCTGCCACGCGGCTGCGGACTCGCTCGTCAGCATGTTTCCTCAAGTCGG
ATCCTTCTCTTCGACGCTCGCTTCCAAGACCGCCAAGGACTCGGGTTGGA
GCGACCACGgtagagaagggaagagcaaCCCCTCCGCACCGGcaccgtcc
tccgcctcgagcGCCCCCACCATGAGCAGGAACAGCAGTTTCTGCTCCGT
GGACGAGTTCGAGCCCacagaggagcagaaggCGACCATGACAAAGAAAG
AGCTGCGGATGCTAAAAAATCGGGAGTCGGCCGCGCGATCTCGGAAACGG
AAGCGGGATATCAtggagaggctggaggaggaggtacgCACGCTGCGCGT
GCAAAACCGCGTTTTGAAGGCGAAACTCGACGTTTACCAGACTACGTACG
GAGAACTACATCTCGCGTCTGATGGCATGCAGGGTGTGGGGAGAAGTATT
TCGCAGGAAAATCTCCAGATGGGGCATGGTGATGGGGACAAGCAGGGTCA
TAcgagggaagcggggaggcgggcggaaAGTCGCGCGCCTCGTATCCAGG
ACAACCGTgccgatgaagaggaggaagacgaggattgACGCATCAGTGGT
CTGATTCTCGCCTTGCGCGAAGGCTGGGATTAATCTCGGCGTGAATCGGG
CTCTGATCCATACCCCCCTAAGGACATTGGCGGCTTTAGGGGGAACGCAA
AGGAGAGCGCGTGCATGTGGAGGGGATTTATGTGGTGTAGGAAGATTTGG
ATCACGATAGGTGGCACGAGCGACATGGCGGAGTACGCTGCTTCTTGTAT
TTGACGCCTGGGAAGTGGGAGCCGGGTCAAGAGGGAAATCGATGTGGGGC
AGTAGCCGAGCACTGTGATCTAGGAACGAGCCCATCGCAGGAGCTAGATT
GCTAAGAGGGGATCGGCAACTTTCCAGGACGAAGTAGCACACGGATCGAT
GTAAGGCTGGGATACGAAGGGGGTTTGCTGTTTTTTCGGCGTCTCGTCCA
CGATGTGGTCATGGCGGCTTTCCGGGGGACAGCGCAGGAGTGGGCATAAC
CCGTTAATGTGAGACTCGGCTGATCCGATAGAACTTCGGAGGCAcaggcc
ggagggggagacgaaggcgtgAAGGCGTGAGACCAGCCAGAGGACTTCCA
AGGATGTGGAAGGGTGTCGTTGTGCATTGTTTGAATTTGAGACAGCGAAA
AGTACAGATGAAGAGAGTGTCGGTAGACGAAAAGAGTTTCGTGTAGACTA
GCATGTGTTTCAATTGTTGTATTTCGGGCGATGTTTCGCCATTAATACGT
CGCATGTGCTGCGCGGCATGAGGCGAACGGCGGTTGAGTGAAAATGAGac
aagggtgggagagggcggagtAATGGTTGGTGCGATTAAAGGCAACCGCT
GAGTCATACGTGGATTGCGTTTATTGCAAGTTTTGAAAGCGAATAGTTTC
ATTATTCTGAGCcggaaagaagaaatggaagaTGACACAACACGATGATC
CGGGTGCGCAAAGTGCTGTGCTCCGCCACATGAGAGGAAAATGAACGATA
TACGCTGTGAAGCCGCTTGAGAAAGCAAGTGCTGGATTGCAACGTTCTGA
TGGAAGCATCCAGCATATCGAGAACACT back to topCoding sequence (CDS) from alignment at CM002467.1:566909..569686+ >rna6100 ID=rna6100|Name=rna6100|organism=Nannochloropsis gaditana|type=CDS|length=1236bp|location=Sequence derived from alignment at CM002467.1:566909..569686+ (Nannochloropsis gaditana)
ATGTCTGCACACAAtgcggcctcctcggccgacCTTCGAGGAGAATCCAA
AGGGGGACTAGACGGGGGCGTCCGCAACATGCATGCGCACGCCGTGCGGA
CACACCCTCACATGTCATCCTCCACGTCTAACGAAGGCAGTTTTGTcagc
acaagcagcagcaaggatGGCCGCACGGATGACGAATCTCTCTCGGATGG
CAGCCGGAGCCCGTCGTCAAGCTCCTTGTCGTCCGCTTCCTGCGCGTCGT
CCACCACCATGACAGCGAACGCTCCTGCCTACAAGCCGAGGTCGCGGATG
GAGAAAATGATGCACATGtcccagcagcagcaatatCAAGACCACGAAGA
CAggctcgaagaggaagaaaaagctCTTGCCGCGGCCGCTGTCATTGCCT
CTGTTAGGCATGAGGACCCCACGGTGTGGCAAGGGAATAAGAAGGCAGTA
GCCCGCGCATCCCCCTCGCATCCCCtgtcctcggcgccctcggccgcccc
CAGACCTGCGCCAGCTCCAGGATCACCTACTTATGCCTTGGACGTGACGC
GAAGAGGCGCTGTTCCCAGTCAATCGGGTGGCTCGGGAGTTGACAGCCGG
CCCGAACCGGAGAAGCCCaccggcttccccccctccctgccggtCGACGC
CTGCCACGCGGCTGCGGACTCGCTCGTCAGCATGTTTCCTCAAGTCGGAT
CCTTCTCTTCGACGCTCGCTTCCAAGACCGCCAAGGACTCGGGTTGGAGC
GACCACGgtagagaagggaagagcaaCCCCTCCGCACCGGcaccgtcctc
cgcctcgagcGCCCCCACCATGAGCAGGAACAGCAGTTTCTGCTCCGTGG
ACGAGTTCGAGCCCacagaggagcagaaggCGACCATGACAAAGAAAGAG
CTGCGGATGCTAAAAAATCGGGAGTCGGCCGCGCGATCTCGGAAACGGAA
GCGGGATATCAtggagaggctggaggaggaggtacgCACGCTGCGCGTGC
AAAACCGCGTTTTGAAGGCGAAACTCGACGTTTACCAGACTACGTACGGA
GAACTACATCTCGCGTCTGATGGCATGCAGGGTGTGGGGAGAAGTATTTC
GCAGGAAAATCTCCAGATGGGGCATGGTGATGGGGACAAGCAGGGTCATA
cgagggaagcggggaggcgggcggaaAGTCGCGCGCCTCGTATCCAGGAC
AACCGTgccgatgaagaggaggaagacgaggattgA back to top
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