EWM24592.1, cds6085 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24592.1 vs. NCBI_GenBank
Match: gi|585106108|gb|EWM24592.1| (Basic-leucine zipper domain protein [Nannochloropsis gaditana]) HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
Query: 1 MSAHNAASSADLRGESKGGLDGGVRNMHAHAVRTHPHMSSSTSNEGSFVSTSSSKDGRTDDESLSDGSRSPSSSSLSSASCASSTTMTANAPAYKPRSRMEKMMHMSQQQQYQDHEDRLEEEEKALAAAAVIASVRHEDPTVWQGNKKAVARASPSHPLSSAPSAAPRPAPAPGSPTYALDVTRRGAVPSQSGGSGVDSRPEPEKPTGFPPSLPVDACHAAADSLVSMFPQVGSFSSTLASKTAKDSGWSDHGREGKSNPSAPAPSSASSAPTMSRNSSFCSVDEFEPTEEQKATMTKKELRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQTTYGELHLASDGMQGVGRSISQENLQMGHGDGDKQGHTREAGRRAESRAPRIQDNRADEEEEDED 411
MSAHNAASSADLRGESKGGLDGGVRNMHAHAVRTHPHMSSSTSNEGSFVSTSSSKDGRTDDESLSDGSRSPSSSSLSSASCASSTTMTANAPAYKPRSRMEKMMHMSQQQQYQDHEDRLEEEEKALAAAAVIASVRHEDPTVWQGNKKAVARASPSHPLSSAPSAAPRPAPAPGSPTYALDVTRRGAVPSQSGGSGVDSRPEPEKPTGFPPSLPVDACHAAADSLVSMFPQVGSFSSTLASKTAKDSGWSDHGREGKSNPSAPAPSSASSAPTMSRNSSFCSVDEFEPTEEQKATMTKKELRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQTTYGELHLASDGMQGVGRSISQENLQMGHGDGDKQGHTREAGRRAESRAPRIQDNRADEEEEDED
Sbjct: 1 MSAHNAASSADLRGESKGGLDGGVRNMHAHAVRTHPHMSSSTSNEGSFVSTSSSKDGRTDDESLSDGSRSPSSSSLSSASCASSTTMTANAPAYKPRSRMEKMMHMSQQQQYQDHEDRLEEEEKALAAAAVIASVRHEDPTVWQGNKKAVARASPSHPLSSAPSAAPRPAPAPGSPTYALDVTRRGAVPSQSGGSGVDSRPEPEKPTGFPPSLPVDACHAAADSLVSMFPQVGSFSSTLASKTAKDSGWSDHGREGKSNPSAPAPSSASSAPTMSRNSSFCSVDEFEPTEEQKATMTKKELRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQTTYGELHLASDGMQGVGRSISQENLQMGHGDGDKQGHTREAGRRAESRAPRIQDNRADEEEEDED 411
BLAST of EWM24592.1 vs. NCBI_GenBank
Match: gi|585107587|gb|EWM25725.1| (activating transcription factor 6 [Nannochloropsis gaditana]) HSP 1 Score: 64.3142 bits (155), Expect = 1.705e-7 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 296 MTKKELRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQ 346
+TKK+LRM++NRESAA SRKRKRD +E LE EV L+ +NR LK +L Y+
Sbjct: 249 LTKKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYE 299
BLAST of EWM24592.1 vs. NCBI_GenBank
Match: gi|553180928|ref|XP_005853482.1| (activating transcription factor 6 [Nannochloropsis gaditana CCMP526] >gi|422295577|gb|EKU22876.1| activating transcription factor 6 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 64.3142 bits (155), Expect = 1.808e-7 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 296 MTKKELRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQ 346
+TKK+LRM++NRESAA SRKRKRD +E LE EV L+ +NR LK +L Y+
Sbjct: 249 LTKKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYE 299
BLAST of EWM24592.1 vs. NCBI_GenBank
Match: gi|585107588|gb|EWM25726.1| (activating transcription factor 6 [Nannochloropsis gaditana]) HSP 1 Score: 64.3142 bits (155), Expect = 1.993e-7 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 296 MTKKELRMLKNRESAARSRKRKRDIMERLEEEVRTLRVQNRVLKAKLDVYQ 346
+TKK+LRM++NRESAA SRKRKRD +E LE EV L+ +NR LK +L Y+
Sbjct: 249 LTKKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYE 299 The following BLAST results are available for this feature:
BLAST of EWM24592.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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