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Properties
| Property Name | Value |
|---|
| Product | Breast carcinoma amplified sequence 2 |
| Orig transcript id | gnl|cribi|Naga_100062g15.900.mrna |
| Orig protein id | gnl|cribi|Naga_100062g15.900 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:561301..562770 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6098 ID=rna6098|Name=rna6098|organism=Nannochloropsis gaditana|type=mRNA|length=3415bp
GGGATGAGAGCCCCCCTTCCTCCTTTTTAATCTGGAGGATTGGTTGTATT
AGCTACTGCATACATTCACACATCGGACCACATCTTACGTCTCACAGGTG
GCTCAGGAGGAGGAGCCCGCTTGTTGTCCTTTCGGGTTGAAAAGAAGAGG
GAAGCCTCGGCGGATAGAAGCGAGAAGAAAGGATAAGAGCGCTGAGCCCT
ATCTTTTCTTCGATCTCAATCCCAGGAGCTTTACCTTTTCGCTGCGCCCT
CATCTGCAGGGTTCGTAAACGCTTTGTGGATCGTTCTCGGTGCCAGTGTC
TTCGACGCGGCCGTGCTGTATCCCGAGCGTCCTCATCTCCCTCTCCTTCC
GAGGCCGAGTCTGCTGCCTGTCGTCTTTTCCATCCGCGCTGATGGCGTCG
CAGCTCTAGGCGGATTTTTTTTGCGTGAAAACCCCGCCCTTCCAGGGGGG
GATGGGAAGAAGGGTCTTGCGGCTGCTGATTCCCGTCACGGTTGTGCGTA
CTTTGTAGAGAACGAAAGAGCAGGCTCAGGACAGACGTGTCACGAGTCCG
AGGATCTGTATTCTGAGGTGAGGCTCGACAGGCTTCGCACCATCAGTCCT
TCCCTTGGAGACGCTCCGTCCCTCTCGTCCCTTCCTTCCCTCTGCACGTT
GGGCCCCTCTTACTCCTCGTCCACGCTCCACTCCTCTGCCACCTACTCCT
TCGACCCCTCAAGCTTGCCGTCCTCCGCATCGGTCGCGTGGTCTTGCAGG
GGGCGGAAGTCTGCCATGGACAAAGGTCCGGAAGAACGGAGCAGGTTGTT
GGTCCGTACCTTGGGATGCGTGCTTCAAAAGCTGTTGGATGTGAACAAGA
GGGGAGAGACTGCTGAGGGTGACGGGAACTCGCCCACCATCACCAAATTC
CACGCGTCGCGCCCCCCGAGTATCAGTGTCGCTGAGTACTTGGAACGGAT
CAACAAGTACGCGTCGTGCTCCTCCGAGTGTCTGGTGCTGGCGCTCATTT
ACATCGACCGGTTGATCCAGCAGAGCAACTTTGCCTTGACCGCGTTGAAC
GTGCACCGGGTCTTGATCACCGCGGTCATGCTCGCGGCCAAGTTTTTCGA
CGACCAGTACTTCAACAACCTGTACTACGCCAAGGTCGGGGGCGTGCCCT
GCAAGGAGATCAACGCGCTGGAGGTCGAGTTTTTGTTTTTGACGAACTTC
TCCCTCCACGTCACCGAAGACGTCTTCTTCCGGTACTTCCACGAACTTAT
GAACCATGCCGCGCATGCCGCCTGCCCGTCTTGTTGCCCCCGCTTCGCCA
GCAGCGGGAGCAAAATGAATCTGGGCAGTGGGAGCATGGCCGGTGTGACG
GGGACGACGGGCGGTGGGGTAGGAGGAGTCGGGCGGGTTCCGAGCCCGGT
CTTTGTGGACGGAGGTTGGCTGGTCAATCGCGGTATGGGGGGCGGACGCT
CTGTGTCGCCTGGCATGGTGGTAACCCCTCCGCTTTCCCATCGGCAGCAC
CTGCAGCAACAGCAGCTTGTGCATGAGCAGCAACAGGAACAACGGCGTCT
GGTTTTGTCGGGGGGCAAGGCGGGCATGGCAGGAGAGGCTCAGCAGCCGA
TGTCGGTAGACCAGCGACAGCGACATTTTACGTCCTACTTTTCGTTCGAG
AACGGTCCCGTGCCTGGGGCGTATCCGGGCTCCGCAGCCTCCCTGGCCGG
ACACAAGGTATCGGATGGGTTCCAGACTAGCCCCTCCTGCCATCGCCCTG
TGCTACAGCCGCACGAGCAAGCACCACACTTCCAGTATCCTCACGTGCTG
TACGCCCCCGTACCGGTAAGCTGCAAGCCACCGCCCCGACTGTTGGTCTC
GCACGCACCGGCCTTCTACTCGAGCCATTCCTCGAACTCCTCGTCGTCCG
CTGTGTCGCCCGCGGAGGCCTGTGGAGACGCAGGAGATGTGCTGTGTTGG
GGCGAGGGAGTGAGCAGGCCGGCGTATTACGGCCAAGAGCGCCAGCATGG
GCCCTGCAATGCCTCCCTGGCGTCGGAGGTTGCGTCGGGGACGTGCAACA
GCCGCGGCGCGGGCGTTGGAAGCAGCCTACAAGGAGTGGGCAGCGGTTTC
GAGCGCTCAGTCAGCCTCGAGTCTGCGGGAAACGGCACGGCCGCTGCGGC
TGCCGTTGCACGACAAGAGCACCACCAGCGTATGGCGGGTAGAGGGGGAT
CGGGAGCAGGCGTTGCGGGCAAATGCTTGGGGACACAGACCCGTTTGCAT
CACTACCGACCGCAGCAGCACCAGCATCAGCATCAGCAGCTGCAGTCGCC
ATTTTACCCAACCCACTACGCTCCAGTTCAGCAGCAGCAACAGCAACAGC
AGCGCCTCCAGCATCATTACAACAGCGCGGCTGGTGGTATGGGGGCAGGG
GTCGGCTTGGGAAGCCGGGCGAGTATGTGCGCTCACTCTTACTTTCAAGG
AGTCCAAGTTCTCATGAATTCTTGAGAGAGACAGGTAGTGGCTGGTATTC
CTTCCGGAGACATCGTGCGTTTTGGTTGGCAAGGGGCTACTGAACCATAG
AGAAGGCCGGTTTGGATTTGGAGGAGCTAAACACTGCCATCACGGATGAA
AGAGTTAATGATGGACAGCGAGCGAATCTGATTTTTTGTGTTTGTTCTGC
GAACCTTTGTGTCGGCAAGCACACTTAGGAGTTCCGTATGGTGTATATGG
GAAATGAGGCCGTGCGGAGGGAGGTTACTTGCGCTGAGGAAGAATCTGGA
AGGGATATTACGGACTTAATCGAGGAGACTACGAGGGAGCCGAAGGCACC
AAAATCCAAATTCTTTTGATTTTGTGTACGGAGGTTACGAGGTAGGTACG
AGGGTATCAATTTCGCAAGCCGCTTTTCTGGCATACAGTTAATAGCTTGA
AGGATGTGGAAACGTCGACTTAGAGAAAGAAGGTCAGCGGGCCAGAAGAG
AGCGCGCCATAATATGAGCATCTTTTACTACGCATGAATGTCAATTTCGA
TGCCATGTCCTGGTGCCCAGGGAAGCACTACCGTCATAGCCCGGTTAGAA
AGTTTGTACGGTGAGGGCAGAGACTGTTGCGGAGGGACAAGGACAGGGCG
ACCGCAAGCAAGGGAACAAAACGCAGACATCTGAAGCCCGGAGCGTGGAG
TGGCGACGAAAGGCTGGGCGCAACATTACAAGCAGAACAATTTGAAGCAC
ACGGCAGCAACACATTTACAATCGCAGACCTGTGCGCTCATGAGAAAACA
ACGGGGAAAGGGAAACGAAACCTTGATCCCCTCAAAAAAACCTCGGGCAT
ATACCCACGTCCACACCCGTGGCATACAAGGCCAACATGGCCAGCGTTTA
AAAAATGGATAAAAACTTTTAAAAAGTAAAAAAAGAAGAAAAAACTGAAC
AAAATCGGCTTCTCG back to topprotein sequence of rna6098 >rna6098-protein ID=rna6098-protein|Name=rna6098|organism=Nannochloropsis gaditana|type=polypeptide|length=247bp
MQLSTSIAKDSGSEPTMHPSLEQLNLDALPYIDGEMDPDIRARVDQLILE
EMRNPRFPKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRY
AGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLA
YNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDE
TLYTNLELQKACAMLRMEIKRLRTDVASKAALEGHKKNENEVEEDAL back to topmRNA from alignment at CM002467.1:561301..562770- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6098 ID=rna6098|Name=rna6098|organism=Nannochloropsis gaditana|type=mRNA|length=1470bp|location=Sequence derived from alignment at CM002467.1:561301..562770- (Nannochloropsis gaditana)
AGACACAGGCGTTCATTCGAGACCACGAGGCCACAGTTTGAGAAAAAAGG
ACACAAGCGCTACACTTATTGAATCCAGTTATCCATCGCAGGGGCAAGAC
GGCATTTCTCTGGCTAAATAGGGCAAGGTCCGTGGAAATTGTGACCACAA
AGGACGACGAAATCTTGTCCCACCACGGCTAGTGCTCCATCCTGTGCGAC
AACATGCAACTATCAACATCCATTGCCAAGGATTCGGGCTCTGAACCCAC
AATGCACCCTTCTTTGGAACAAGTAAGTGCAGATTTGACCTTGACGCATG
GAAAGGGCTGAACTCTTCGTGTCCATCGCATCAGTCCCCTGACATTTTCT
TTTCGCCACATCCTCTTCACGGGGCAGCTAAATTTGGACGCATTGCCGTA
CATTGATGGGGAAATGGACCCAGACATACGGGCGCGGGTCGACCAACTGA
TTTTGGAAGAAATGCGGAATCCTCGCTTTCCCAAAAGGTCAGGAGACGGT
CTGGAAAGAGAGGACCCCGTCTAAGCGACTAGCTGGCCGGGTTCTCATCC
CACATCCACTCGACAACATTTCCACAGGGATTATTTGGCTGACCGCCCGA
TGCCGGAGCTGAATTTCGAAAAGAGTTTTTTTATCGCCACCGAGCTAGAA
AGAGTGGCGGCGGGGAAACCCATGGCGCCCCTGGATGAGTCAAGGTAAGA
GAACATTCGCCTTGCGGTTTTTTGCATCGAAAAAATCTCACAACGATAAG
AAACAATCTACATAACATCATGGAATGCAGATATGCTGGAAAGAAACCAG
ATCCTGGGCTGCAGGGAGACCTTCAGGCCTGGCGCACGGCTCTGAACAAC
CTCCGGGCGCAAGAAGAGCACCTGGGCAACAGGTGGGTTTCGTTCTACTG
GCTCTGCACTTGGGAAAGAAAGTCAGGGTTGTATTTCAAGAGCTGCGTGA
AATGACTTTTCTTCCAAATCGTGCTTTGGAACCCTCATCAGGATTGTGAA
CATGGAGCTGCTACAGAACTTCGCTCCAGACGTCTGGCTGGCCTACAACC
GGGAGCTGGAGACTTTCAAGGGCAATCTGGACAAAGAGTTGGAGAGCCTT
CGAAAAGAAGCAGAGTTGGTACGTGTGTGGGGGAGGATTTGGGGGGGCAG
AAAAGAGGTCTCCGAAGCTTATTCTCATGATATTTTTCCCTGTGTCCTTT
TCCAACCAGATAAATTTAAGTAGGAAAACGAAACAAGAAGAGGTGGCCCC
TCGCCTTTCGAACTTAACTCGGAAAAGGGATGAAACACTTTACACGAACT
TGGAGCTTCAAAAAGCTTGTGCCATGCTGCGGATGGAAATTAAGCGGTTA
AGAACAGACGTGGCATCAAAAGCTGCTTTAGAGGGGCACAAGAAAAACGA
AAACGAAGTAGAGGAAGATGCCTTGTAAATGAAAGATAGACGAAAGTTGA
AGAGCTTGTGTAAGCAATGC back to topCoding sequence (CDS) from alignment at CM002467.1:561301..562770- >rna6098 ID=rna6098|Name=rna6098|organism=Nannochloropsis gaditana|type=CDS|length=4464bp|location=Sequence derived from alignment at CM002467.1:561301..562770- (Nannochloropsis gaditana)
ATAAATTTAAGTAGGAAAACGAAACAAGAAGAGGTGGCCCCTCGCCTTTC
GAACTTAACTCGGAAAAGGGATGAAACACTTTACACGAACTTGGAGCTTC
AAAAAGCTTGTGCCATGCTGCGGATGGAAATTAAGCGGTTAAGAACAGAC
GTGGCATCAAAAGCTGCTTTAGAGGGGCACAAGAAAAACGAAAACGAAGT
AGAGGAAGATGCCTTGTAAGATTGTGAACATGGAGCTGCTACAGAACTTC
GCTCCAGACGTCTGGCTGGCCTACAACCGGGAGCTGGAGACTTTCAAGGG
CAATCTGGACAAAGAGTTGGAGAGCCTTCGAAAAGAAGCAGAGTTGATAT
GCTGGAAAGAAACCAGATCCTGGGCTGCAGGGAGACCTTCAGGCCTGGCG
CACGGCTCTGAACAACCTCCGGGCGCAAGAAGAGCACCTGGGCAACAGGG
ATTATTTGGCTGACCGCCCGATGCCGGAGCTGAATTTCGAAAAGAGTTTT
TTTATCGCCACCGAGCTAGAAAGAGTGGCGGCGGGGAAACCCATGGCGCC
CCTGGATGAGTCAAGCTAAATTTGGACGCATTGCCGTACATTGATGGGGA
AATGGACCCAGACATACGGGCGCGGGTCGACCAACTGATTTTGGAAGAAA
TGCGGAATCCTCGCTTTCCCAAAAGATGCAACTATCAACATCCATTGCCA
AGGATTCGGGCTCTGAACCCACAATGCACCCTTCTTTGGAACAAATAAAT
TTAAGTAGGAAAACGAAACAAGAAGAGGTGGCCCCTCGCCTTTCGAACTT
AACTCGGAAAAGGGATGAAACACTTTACACGAACTTGGAGCTTCAAAAAG
CTTGTGCCATGCTGCGGATGGAAATTAAGCGGTTAAGAACAGACGTGGCA
TCAAAAGCTGCTTTAGAGGGGCACAAGAAAAACGAAAACGAAGTAGAGGA
AGATGCCTTGTAAGATTGTGAACATGGAGCTGCTACAGAACTTCGCTCCA
GACGTCTGGCTGGCCTACAACCGGGAGCTGGAGACTTTCAAGGGCAATCT
GGACAAAGAGTTGGAGAGCCTTCGAAAAGAAGCAGAGTTGATATGCTGGA
AAGAAACCAGATCCTGGGCTGCAGGGAGACCTTCAGGCCTGGCGCACGGC
TCTGAACAACCTCCGGGCGCAAGAAGAGCACCTGGGCAACAGGGATTATT
TGGCTGACCGCCCGATGCCGGAGCTGAATTTCGAAAAGAGTTTTTTTATC
GCCACCGAGCTAGAAAGAGTGGCGGCGGGGAAACCCATGGCGCCCCTGGA
TGAGTCAAGCTAAATTTGGACGCATTGCCGTACATTGATGGGGAAATGGA
CCCAGACATACGGGCGCGGGTCGACCAACTGATTTTGGAAGAAATGCGGA
ATCCTCGCTTTCCCAAAAGATGCAACTATCAACATCCATTGCCAAGGATT
CGGGCTCTGAACCCACAATGCACCCTTCTTTGGAACAAATAAATTTAAGT
AGGAAAACGAAACAAGAAGAGGTGGCCCCTCGCCTTTCGAACTTAACTCG
GAAAAGGGATGAAACACTTTACACGAACTTGGAGCTTCAAAAAGCTTGTG
CCATGCTGCGGATGGAAATTAAGCGGTTAAGAACAGACGTGGCATCAAAA
GCTGCTTTAGAGGGGCACAAGAAAAACGAAAACGAAGTAGAGGAAGATGC
CTTGTAAGATTGTGAACATGGAGCTGCTACAGAACTTCGCTCCAGACGTC
TGGCTGGCCTACAACCGGGAGCTGGAGACTTTCAAGGGCAATCTGGACAA
AGAGTTGGAGAGCCTTCGAAAAGAAGCAGAGTTGATATGCTGGAAAGAAA
CCAGATCCTGGGCTGCAGGGAGACCTTCAGGCCTGGCGCACGGCTCTGAA
CAACCTCCGGGCGCAAGAAGAGCACCTGGGCAACAGGGATTATTTGGCTG
ACCGCCCGATGCCGGAGCTGAATTTCGAAAAGAGTTTTTTTATCGCCACC
GAGCTAGAAAGAGTGGCGGCGGGGAAACCCATGGCGCCCCTGGATGAGTC
AAGCTAAATTTGGACGCATTGCCGTACATTGATGGGGAAATGGACCCAGA
CATACGGGCGCGGGTCGACCAACTGATTTTGGAAGAAATGCGGAATCCTC
GCTTTCCCAAAAGATGCAACTATCAACATCCATTGCCAAGGATTCGGGCT
CTGAACCCACAATGCACCCTTCTTTGGAACAAATAAATTTAAGTAGGAAA
ACGAAACAAGAAGAGGTGGCCCCTCGCCTTTCGAACTTAACTCGGAAAAG
GGATGAAACACTTTACACGAACTTGGAGCTTCAAAAAGCTTGTGCCATGC
TGCGGATGGAAATTAAGCGGTTAAGAACAGACGTGGCATCAAAAGCTGCT
TTAGAGGGGCACAAGAAAAACGAAAACGAAGTAGAGGAAGATGCCTTGTA
AGATTGTGAACATGGAGCTGCTACAGAACTTCGCTCCAGACGTCTGGCTG
GCCTACAACCGGGAGCTGGAGACTTTCAAGGGCAATCTGGACAAAGAGTT
GGAGAGCCTTCGAAAAGAAGCAGAGTTGATATGCTGGAAAGAAACCAGAT
CCTGGGCTGCAGGGAGACCTTCAGGCCTGGCGCACGGCTCTGAACAACCT
CCGGGCGCAAGAAGAGCACCTGGGCAACAGGGATTATTTGGCTGACCGCC
CGATGCCGGAGCTGAATTTCGAAAAGAGTTTTTTTATCGCCACCGAGCTA
GAAAGAGTGGCGGCGGGGAAACCCATGGCGCCCCTGGATGAGTCAAGCTA
AATTTGGACGCATTGCCGTACATTGATGGGGAAATGGACCCAGACATACG
GGCGCGGGTCGACCAACTGATTTTGGAAGAAATGCGGAATCCTCGCTTTC
CCAAAAGATGCAACTATCAACATCCATTGCCAAGGATTCGGGCTCTGAAC
CCACAATGCACCCTTCTTTGGAACAAATAAATTTAAGTAGGAAAACGAAA
CAAGAAGAGGTGGCCCCTCGCCTTTCGAACTTAACTCGGAAAAGGGATGA
AACACTTTACACGAACTTGGAGCTTCAAAAAGCTTGTGCCATGCTGCGGA
TGGAAATTAAGCGGTTAAGAACAGACGTGGCATCAAAAGCTGCTTTAGAG
GGGCACAAGAAAAACGAAAACGAAGTAGAGGAAGATGCCTTGTAAGATTG
TGAACATGGAGCTGCTACAGAACTTCGCTCCAGACGTCTGGCTGGCCTAC
AACCGGGAGCTGGAGACTTTCAAGGGCAATCTGGACAAAGAGTTGGAGAG
CCTTCGAAAAGAAGCAGAGTTGATATGCTGGAAAGAAACCAGATCCTGGG
CTGCAGGGAGACCTTCAGGCCTGGCGCACGGCTCTGAACAACCTCCGGGC
GCAAGAAGAGCACCTGGGCAACAGGGATTATTTGGCTGACCGCCCGATGC
CGGAGCTGAATTTCGAAAAGAGTTTTTTTATCGCCACCGAGCTAGAAAGA
GTGGCGGCGGGGAAACCCATGGCGCCCCTGGATGAGTCAAGCTAAATTTG
GACGCATTGCCGTACATTGATGGGGAAATGGACCCAGACATACGGGCGCG
GGTCGACCAACTGATTTTGGAAGAAATGCGGAATCCTCGCTTTCCCAAAA
GATGCAACTATCAACATCCATTGCCAAGGATTCGGGCTCTGAACCCACAA
TGCACCCTTCTTTGGAACAAATAAATTTAAGTAGGAAAACGAAACAAGAA
GAGGTGGCCCCTCGCCTTTCGAACTTAACTCGGAAAAGGGATGAAACACT
TTACACGAACTTGGAGCTTCAAAAAGCTTGTGCCATGCTGCGGATGGAAA
TTAAGCGGTTAAGAACAGACGTGGCATCAAAAGCTGCTTTAGAGGGGCAC
AAGAAAAACGAAAACGAAGTAGAGGAAGATGCCTTGTAAGATTGTGAACA
TGGAGCTGCTACAGAACTTCGCTCCAGACGTCTGGCTGGCCTACAACCGG
GAGCTGGAGACTTTCAAGGGCAATCTGGACAAAGAGTTGGAGAGCCTTCG
AAAAGAAGCAGAGTTGATATGCTGGAAAGAAACCAGATCCTGGGCTGCAG
GGAGACCTTCAGGCCTGGCGCACGGCTCTGAACAACCTCCGGGCGCAAGA
AGAGCACCTGGGCAACAGGGATTATTTGGCTGACCGCCCGATGCCGGAGC
TGAATTTCGAAAAGAGTTTTTTTATCGCCACCGAGCTAGAAAGAGTGGCG
GCGGGGAAACCCATGGCGCCCCTGGATGAGTCAAGCTAAATTTGGACGCA
TTGCCGTACATTGATGGGGAAATGGACCCAGACATACGGGCGCGGGTCGA
CCAACTGATTTTGGAAGAAATGCGGAATCCTCGCTTTCCCAAAAGATGCA
ACTATCAACATCCATTGCCAAGGATTCGGGCTCTGAACCCACAATGCACC
CTTCTTTGGAACAA back to top
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