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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100062g5.922.mrna |
| Orig protein id | gnl|cribi|Naga_100062g5.922 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:543778..544955 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6089 ID=rna6089|Name=rna6089|organism=Nannochloropsis gaditana|type=mRNA|length=2172bp
ATGTCATCGAGCACCGGCAAACGCAACGTGAGCCCCTCGAAAGATGCAAA
TGGTTCTGCGGCCAAGAAGGGGAAGCAGTCCCTCGTAACCCCCTTGTCGA
CCAAAGCAGTGAACACGGTCCGTGTGCTCTGCGCTGATATGGTTCAGAAA
GCAAACAGTGGACATCCTGGCGCGCCGATGAGTCTGGCGCCGCTTGCTTA
TCTCCTCTGGACCCAAGTGATGAAATACAATCCTAAGGATCCGCAATGGC
TAGCCCGAGATCGTTTCGTCCTCTCGAACGGCCATGCCTGCGCGCTACTC
TATGCGATGCTTCACCTCACTGGATACGCACAGGTCACGATGGACGCATT
GAAGGCGTTTCGGCAGGTGGACTCCATCACGGCCGGCCACCCCGAGAACA
CCCTGATCAAGGGGGTGGAGGTGTCCACGGGCCCTCTGGGGCAGGGGATC
TCGAACGCGGTGGGCTTGGCCATGGCCGAAATGCACCTGGGGGCTGTCTT
TAACAAGTCAGGACATGCGAAGATCGTAGACAACTACACGTATGTGATCT
GTGGAGACGGGTGCCTGCAGGAGGGGGTGTCTTCCGAGGCCTCTTCGCTC
GCCGGGCATTTGGGTTTAGGGAGGTTGATCGTCTTCTACGACGACAACCA
GATCACCATAGACGGGGACACGGCGCTGTCTTTCACGGAGGATGTGGCGA
AGCGCTACGAGGCCTACGGCTGGCACGTGCAGACGCTGGAGGACGTGCAG
GACCTGGATGCTCTCTTGGCAGCGACCGAGGCGGCCAAGGCCGAGACCGA
TAGACCGAGCATGATCAAGATCCGCACCCGGATCGGTTTCGGGAGCAAAA
AGGAGGGTTCTCATTCCGTGCATGGCTCGCCTCTGGGGGCGGAGGACCTG
AAGCAGCTCAAGAGCCGCTTCGGCTTTGACCCTGAGCAGGCCTTTGTGGT
GCCCACCGAGGTGGCCGAGCTCTTCCAGGCCGCGGGCGCGAAGGGAGCGG
CGGCCCAGGCGGCCTGGAACACGGCCATGGAGGCATACAAGGGTGCTTTC
CCCGCGGAGGCATCGGAGCTGGTGCGTTGCACCGAGCATCGCTTGCCAGA
GGGTTGGAGAGAGAAGCTCCCCCGGTACACGCCGGAGGACAAGGCAATGG
CCACGCGGAAGTTCTCGGAGATCGCCTTAAACGTCTTGGCGCCCATGCTG
CCGGAGCTGGTGGGCGGGTCTGCAGATCTGACCCCGTCGACCCTGACGGC
CCTGGCGTGCTCCGGCGATTTCCAGAAGAAGACGCCGGACGGCCGGTACG
TGCGCTTTGGGGTCCGCGAGCACGGGATGACCGCCTTGGCCAACGGGATG
TTTGCTTACGGCGCTTTGCGGCCTTTTGTCGCCACGTTTTTGAACTTCAT
CGGCTACGCCTGGGGCGCGGTCCGCCTCTCTTGCCTCTCGCACTTGGGCG
TCATCTTCGTCATGACCCACGACTCGATCGGGCTGGGCGAGGACGGACCC
ACCCACCAGCCGGTGGAAACCTTGGAGCAGATCCGCGCCATGCCCAACCT
GCACTTGCTGCGCCCTGCCGACGGTAACGAAGTTTCAGGGGCCTACATCT
CTGCGCTGGAGCACCCATACACGCCCTCGGTCCTGGCCTTGAGCCGACAA
AACCTCCCCAACCTGGAAGGGACCTCGGCGGAGAAAACCTTGCTGGGGGC
CTATGTCCTCGCCGAGATGGGCGGGAGCAACGGTGGAGGGGGAGCACCGG
AGCTAATTTTGACGGGCTCGGGCTCAGAAGTGGCGATAGCGGTAGAAGCT
GCGAAGACCCTGGCCGAGACTGTGCGTGTCCGGGTCGTATCCTTTCCTTC
ATGGGAGCTCTTCGACCAACAGAACAAGGAATACCGGCTCTCCGTCTTCC
CCGCCGGCGTACCTGTAGTGAGCGTTGAGGCGTCTGCCACGCACGGATGG
GCCAAGTACTCCCACGCCGCCCTCGGGCTGACCTGGTTCGGTGCCTCCGG
TCCCTACGCCAAGGTGTACGCCAAGTACGGATTGACGGCTGATAACCTCG
TCAGCAAGGCGAGGGAGGTCCTAGCTTTCTATGCGGGGGATAGACAAGTG
CCAAGTCTCATTGACGTGCCCTTTATTTCGAAACAGCTCGATCACAAGCC
TGTGGCCACATCCCACGCTTAG back to topprotein sequence of rna6089 >rna6089-protein ID=rna6089-protein|Name=rna6089|organism=Nannochloropsis gaditana|type=polypeptide|length=333bp
MDQSTRRKPRPGLKTSAEAFFTTTASTATQRENPAAASSTSKSSGWKDRL
KERCLNHVHRERGRLIQELRGLKSPPPRALSSHVPSEPLPSSTLSPSLAL
LRPSESSSPSLCFNPSLMGSTVMSILQSEMRVVRMSCEEGQAHGADGKLN
DDGINGFRHGENEDQSFEPRYPPRPIFASNQGHATPPSGSWLKEGGSPIS
RSVAEEEDRATTEYEAGGLEDLSEMEQLELMRCIEEALEAEVMAADAEAL
EEYSQLESSDIEASVQALYDCHTLSHDDIAVLCPCCKSNFLLNHNEDIAC
ACGLRGREQWPVAWAHEVRVAFIVKRFASGEVV back to topmRNA from alignment at CM002467.1:543778..544955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6089 ID=rna6089|Name=rna6089|organism=Nannochloropsis gaditana|type=mRNA|length=1178bp|location=Sequence derived from alignment at CM002467.1:543778..544955+ (Nannochloropsis gaditana)
ATGGATCAGTCGACAAGAAGAAAACCAAGGCCAGGCCTGAAGACAAGTGC
TGAGGCTTTCTTCACGACAACCGCTTCAACCGCCACGCAGAGGGAGAAtc
ctgccgccgcctccagcaccagcaaaTCATCAGGATGGAAAGACAGGCTC
AAAGAACGATGCTTAAACCACGTGCATCGGGAGCGGGGCCGGTTGATTCA
AGAGCTTCGAGGCCTGAaatccccacctcctcgtgccCTGTCCTCGCACG
TTCCGTCAGAACCCCTTCCGTCCTCAACACTTTCTCCATCGCTTGCACTA
TTGCGGCCCTCAGAGAGCTCCAGTCCATCGCTTTGTTTTAATCCATCGTT
AATGGGAAGCACGGTCATGTCTATATTACAGAGTGAAATGAGGGTTGTCC
GTATGTCCtgcgaggaagggcaggccCACGGCGCCGATGGAAAGCTAAAT
GATGATGGCATCAATGGTTTCAGGCATGGAGAGAATGAGGATCAATCATT
CGAGCCACGTTATCCACCACGTCCCATTTTCGCATCGAACCAAGGCCATG
CGACCCCGCCATCGGGATCTTGGTTGAAGGAAGGCGGGTCTCCGATATCA
CGGTCGgtggcagaagaagaagaccgTGCGACCACTGAATACGAAGCGGG
AGGATTGGAAGATCTCTCAGAGATGGAGCAACTCGAGCTTATGCGCTGCA
TCGAAGAAGcgctggaggcggaagtCATGGCGGCAGATGcggaggcgttg
gaagagTACTCGCAGTTAGAAAGCTCCGATATCGAGGCCTCAGTGCAGGC
GCTATACGATTGTCACACCCTCTCACACGACGACATCGCCGTCCTCTGCC
CTTGTTGCAAGTCTAATTTCCTGCTTAATCACAACGAGGACATAGCTTGT
GCTTGCGGCTTAAGGTTGGACgtcgggggaaaggcagggaagatGACATG
GCTGCAGGCCCGACTCGCGGATGTGTACGCGCAGCACAGGGCCCAATGCA
TGCTGCAAGAGCCGGTCTTTAGTCAGCGAGAGCCGCCGGGCTTGTGGGTG
GAGTGCGGGTCCTGCGGCCTGCGGGATCACATACTGTAAGGGGTCGGGAA
CAGTGGCCGGTAGCTTGGGCTCATGAGGTCCGCGTCGCTTTCATTGTCAA
GAGATTCGCCTCGGGCGAGGTTGTGTAA back to topCoding sequence (CDS) from alignment at CM002467.1:543778..544955+ >rna6089 ID=rna6089|Name=rna6089|organism=Nannochloropsis gaditana|type=CDS|length=2004bp|location=Sequence derived from alignment at CM002467.1:543778..544955+ (Nannochloropsis gaditana)
ATGGATCAGTCGACAAGAAGAAAACCAAGGCCAGGCCTGAAGACAAGTGC
TGAGGCTTTCTTCACGACAACCGCTTCAACCGCCACGCAGAGGGAGAAtc
ctgccgccgcctccagcaccagcaaaTCATCAGGATGGAAAGACAGGCTC
AAAGAACGATGCTTAAACCACGTGCATCGGGAGCGGGGCCGGTTGATTCA
AGAGCTTCGAGGCCTGAaatccccacctcctcgtgccCTGTCCTCGCACG
TTCCGTCAGAACCCCTTCCGTCCTCAACACTTTCTCCATCGCTTGCACTA
TTGCGGCCCTCAGAGAGCTCCAGTCCATCGCTTTGTTTTAATCCATCGTT
AATGGGAAGCACGGTCATGTCTATATTACAGAGTGAAATGAGGGTTGTCC
GTATGTCCtgcgaggaagggcaggccCACGGCGCCGATGGAAAGCTAAAT
GATGATGGCATCAATGGTTTCAGGCATGGAGAGAATGAGGATCAATCATT
CGAGCCACGTTATCCACCACGTCCCATTTTCGCATCGAACCAAGGCCATG
CGACCCCGCCATCGGGATCTTGGTTGAAGGAAGGCGGGTCTCCGATATCA
CGGTCGgtggcagaagaagaagaccgTGCGACCACTGAATACGAAGCGGG
AGGATTGGAAGATCTCTCAGAGATGGAGCAACTCGAGCTTATGCGCTGCA
TCGAAGAAGcgctggaggcggaagtCATGGCGGCAGATGcggaggcgttg
gaagagTACTCGCAGTTAGAAAGCTCCGATATCGAGGCCTCAGTGCAGGC
GCTATACGATTGTCACACCCTCTCACACGACGACATCGCCGTCCTCTGCC
CTTGTTGCAAGTCTAATTTCCTGCTTAATCACAACGAGGACATAGCTTGT
GCTTGCGGCTTAAGGGGTCGGGAACAGTGGCCGGTAGCTTGGGCTCATGA
GGTCCGCGTCGCTTTCATTGTCAAGAGATTCGCCTCGGGCGAGGTTGTGT
AAATGGATCAGTCGACAAGAAGAAAACCAAGGCCAGGCCTGAAGACAAGT
GCTGAGGCTTTCTTCACGACAACCGCTTCAACCGCCACGCAGAGGGAGAA
tcctgccgccgcctccagcaccagcaaaTCATCAGGATGGAAAGACAGGC
TCAAAGAACGATGCTTAAACCACGTGCATCGGGAGCGGGGCCGGTTGATT
CAAGAGCTTCGAGGCCTGAaatccccacctcctcgtgccCTGTCCTCGCA
CGTTCCGTCAGAACCCCTTCCGTCCTCAACACTTTCTCCATCGCTTGCAC
TATTGCGGCCCTCAGAGAGCTCCAGTCCATCGCTTTGTTTTAATCCATCG
TTAATGGGAAGCACGGTCATGTCTATATTACAGAGTGAAATGAGGGTTGT
CCGTATGTCCtgcgaggaagggcaggccCACGGCGCCGATGGAAAGCTAA
ATGATGATGGCATCAATGGTTTCAGGCATGGAGAGAATGAGGATCAATCA
TTCGAGCCACGTTATCCACCACGTCCCATTTTCGCATCGAACCAAGGCCA
TGCGACCCCGCCATCGGGATCTTGGTTGAAGGAAGGCGGGTCTCCGATAT
CACGGTCGgtggcagaagaagaagaccgTGCGACCACTGAATACGAAGCG
GGAGGATTGGAAGATCTCTCAGAGATGGAGCAACTCGAGCTTATGCGCTG
CATCGAAGAAGcgctggaggcggaagtCATGGCGGCAGATGcggaggcgt
tggaagagTACTCGCAGTTAGAAAGCTCCGATATCGAGGCCTCAGTGCAG
GCGCTATACGATTGTCACACCCTCTCACACGACGACATCGCCGTCCTCTG
CCCTTGTTGCAAGTCTAATTTCCTGCTTAATCACAACGAGGACATAGCTT
GTGCTTGCGGCTTAAGGGGTCGGGAACAGTGGCCGGTAGCTTGGGCTCAT
GAGGTCCGCGTCGCTTTCATTGTCAAGAGATTCGCCTCGGGCGAGGTTGT
GTAA back to top
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