EWM24599.1, cds6074 (CDS) Nannochloropsis gaditana

Overview
NameEWM24599.1
Unique Namecds6074
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:543778..544691 +
Alignment locationCM002467.1:544868..544955 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24599.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100062g5.922.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:543778..544691 +
CM002467.1supercontigCM002467.1:544868..544955 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR028158RPA_interact_N_dom
Homology
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BLAST of EWM24599.1 vs. NCBI_GenBank
Match: gi|585106115|gb|EWM24599.1| (hypothetical protein Naga_100062g5 [Nannochloropsis gaditana])

HSP 1 Score: 683.715 bits (1763), Expect = 0.000e+0
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0 
Query:    1 MDQSTRRKPRPGLKTSAEAFFTTTASTATQRENPAAASSTSKSSGWKDRLKERCLNHVHRERGRLIQELRGLKSPPPRALSSHVPSEPLPSSTLSPSLALLRPSESSSPSLCFNPSLMGSTVMSILQSEMRVVRMSCEEGQAHGADGKLNDDGINGFRHGENEDQSFEPRYPPRPIFASNQGHATPPSGSWLKEGGSPISRSVAEEEDRATTEYEAGGLEDLSEMEQLELMRCIEEALEAEVMAADAEALEEYSQLESSDIEASVQALYDCHTLSHDDIAVLCPCCKSNFLLNHNEDIACACGLRGREQWPVAWAHEVRVAFIVKRFASGEVV 333
            MDQSTRRKPRPGLKTSAEAFFTTTASTATQRENPAAASSTSKSSGWKDRLKERCLNHVHRERGRLIQELRGLKSPPPRALSSHVPSEPLPSSTLSPSLALLRPSESSSPSLCFNPSLMGSTVMSILQSEMRVVRMSCEEGQAHGADGKLNDDGINGFRHGENEDQSFEPRYPPRPIFASNQGHATPPSGSWLKEGGSPISRSVAEEEDRATTEYEAGGLEDLSEMEQLELMRCIEEALEAEVMAADAEALEEYSQLESSDIEASVQALYDCHTLSHDDIAVLCPCCKSNFLLNHNEDIACACGLRGREQWPVAWAHEVRVAFIVKRFASGEVV
Sbjct:    1 MDQSTRRKPRPGLKTSAEAFFTTTASTATQRENPAAASSTSKSSGWKDRLKERCLNHVHRERGRLIQELRGLKSPPPRALSSHVPSEPLPSSTLSPSLALLRPSESSSPSLCFNPSLMGSTVMSILQSEMRVVRMSCEEGQAHGADGKLNDDGINGFRHGENEDQSFEPRYPPRPIFASNQGHATPPSGSWLKEGGSPISRSVAEEEDRATTEYEAGGLEDLSEMEQLELMRCIEEALEAEVMAADAEALEEYSQLESSDIEASVQALYDCHTLSHDDIAVLCPCCKSNFLLNHNEDIACACGLRGREQWPVAWAHEVRVAFIVKRFASGEVV 333
The following BLAST results are available for this feature:
BLAST of EWM24599.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106115|gb|EWM24599.1|0.000e+0100.00hypothetical protein Naga_100062g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6089rna6089Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications