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Properties
| Property Name | Value |
|---|
| Product | hydrolase or acyltransferase |
| Orig transcript id | gnl|cribi|Naga_100171g5.2669.mrna |
| Orig protein id | gnl|cribi|Naga_100171g5.2669 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:529267..531612 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6082 ID=rna6082|Name=rna6082|organism=Nannochloropsis gaditana|type=mRNA|length=1741bp
ATGACACGCCTCGAGTTGCAGGTGCTTCCTTCAAGAGGAGAAGGCTTCGC
GCAAAGTAGTCTTTTCTATGATTTAGAAGAGTGCGTAAGTGCAGAATATA
CTTTTAGGGTAAAAAAGCATGGGTCAAGACAGTCCGCCCTTCGAGGGTAC
CTGTCTGCGTCACGTCAGCCTACCCGGAGGAAGACCCCAAAAGGCGACTC
TAGCTTGCTCCGACTTGTAAACATCCTGTCAGGACACTTCTCACAAGGCA
CCAATGTTTCAGTAACTATCCAGTCTACTACTTCTTTCCAATCGCATCAT
GGTAGATCAGGACAAGACTTGCGACAGGCTGGCGTTCCTCATCTGAAGTG
GAGCGCGTCCTGCAGCGATGACTCGAGTGTCCTTCCTACTGCTGCTTTGC
TTATGCCTCATGACATTTTTCTTCGCCAATGCAAGCGGCGTGGAGAAGGG
TGATACTTGGGTTGTACTGTGGTCAGGCGTCTCGGCGTCCCGGACAGTCA
GATCGTGCTGATGCTTGCGGATGACATACCATGTAATGCGCGAAACGCTC
GACCAGGCGGGGTATACCATTCGACCACCCACACGATAGACCTCTGTGCA
AACGGCTTGGAAGTGGACTACAAAAACGAGGAAGTGACAGTTGAAAACTT
TGTGCGCGTCTTGACCGGGCGGCATCCGCCTGGGTGGCCCATTTCCAAAC
GCCTGGGAAGCGGCAACACAAGCCGCGTGTTCATTTACATGACGGGTCAC
GGCGGCGACGAATTTCTGAAATTTCACAACCATGAGGAAATCAGCAGCGA
GGATCTGGCGCACACGCTCCAGGACATGAAGACCGCGGGCCGTTACCAAG
ACTTGTTCTTCGTTGTCGATACCTGTCAGGGGGGAACGCTCTTCCGGCGC
TTCCGGACCCCTGGCGTGCTGGCAGTGGGCAGCAGTGGTCAAGGCGAGAA
TTCATTCGCGCATCAGAATGACATGGTCCTCGGGGTTGCCCTTGTGGACC
GATTTACAGACGCTTCGTGTCAGTACCTGCATAAGCTGGCCGACAGAGCG
ACGGCCCCTCAGCTGAGCTCGCCTTTGGGTCTCTTATCTCAGGTACCTTT
GTCAATGCTGCTCGGATCTTACAACCCAGTTCAACTAAAGTCAACGCCTG
TGCTTCGTTCGGACCTGTTCGAATTCGAAGCCTCTAGAGAGGACGAGGCA
GAGGAGGTCGGCGATCTTGGTAACCATAGAGGCGCCGCCACGGGAACCGA
CTCTCGACTGGCTCAGACGGCAGTGACGCATTTTTTTGGGCAAGAGGAGC
GTCTACGAGTAGTTTCGATACTAGAAGCTGCAAAGGATGAGGAAATTGAG
AGCGTTGGAAGCAGAAACACGTGTAGCAGGACAGTCGAGGCTATCCCAGT
CCGCCTTTCGCAAGCGCACATCGATACTTTAAGCACATCACCTGCAAATC
ATTTTGAAGCATCGTATGACAGAAACAGTATCATGCTCTCACTGTTGAGT
CTTGCGATGTGTGCCATGAATTTGAGGATGTGTAGAATAGAATGACTAAT
GGAGTGTACTTTTGTTTGGGAACCTGGATAAATGTATCAACGTCGGCAAC
CGCTTTATGGTAAGCTGTGGCTTTTCCCTGCGACCAGACTTCCCTCCCTT
AGTAATTGTCAATGTTTATGTAGATAATAATAAAGAAATTTGCACGACGT
AAATGGTTTTCATTGCCGTGCCACCCACCCAAGCCTCATCC back to topprotein sequence of rna6082 >rna6082-protein ID=rna6082-protein|Name=rna6082|organism=Nannochloropsis gaditana|type=polypeptide|length=411bp
MAPFLGSPPPTVVRAEKAAVEAGVRRSERFNLFRIASGRIRNRGTPRHLI
RTGALDDGGAPRVGGARGEGVCGPFGRQCPEIDARGLTSVTLNIGMRQRW
RERMFLASYIADALVCAAHDLVLSPHKEGSKRPVLLVPGWCGRTRSFRKM
AERLVREGYPVYPVPLGSQLGCIDRKARLVSKFLDLHGLEDVYVVAHSMG
GLISVRSMMKGETRIRKLVTMGTPYRGTHVIYLGYAVTLALVLALSFWLS
PLAGTIYLALFLQIPSLYQMQPSSDFLEETLEYLNRVATPVQCIYAVRDQ
IVIHDWRQAWSPTRLGRPDDLCLLEYGHMNLFMGESGIELVARLLERYDA
ADASLPSSRCVEGTTASVEKGAEEREGEYVPPAKCLRKGPTGAGGSPPPG
RRKEMGREEEE back to topmRNA from alignment at CM002467.1:529267..531612+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6082 ID=rna6082|Name=rna6082|organism=Nannochloropsis gaditana|type=mRNA|length=2346bp|location=Sequence derived from alignment at CM002467.1:529267..531612+ (Nannochloropsis gaditana)
GAACAAATGCAAGTTGacgtccctccccgccgtgccAGCGCCGGCTCCAC
AGAAACATGTCCTTTCCACCATATGTGATGCGCGTGATAATTGGTGTGCA
AAGAGATTTGGCAAACCTGTAGGCGTGGACTCCCGCATCTTGCCACATTT
GTACCCGACGTGCGCCCCTTTTGGCCTATGAAAAGAACGGACCCGAGAGA
GCCAAAGGAATGACCTGTACGTCGTGCAGGACCTGCTTGCCGCTTCAGGT
GCACGCCACAAGAAGCATCAGGAAGCTGTACACGAGGATAAAGCATGTTG
CATAAATTTATATATGAACTCGGGCGACAGAAATGTTGCTAATCTTCATA
AGGGGTCCTACATTTCGCATGCAAATACTCAAGCAGCAGCGCCCCCTTGC
AAGGGGACGGGATCGGACCTAGGCCCGCAAAGAACACTTCTCAACAAGAT
GGCGATATATTAACACTCACAAACCATACACGGGTCATATAGAGGGCTTG
TAAGGGCTGTGGTAGCCTGTTACTTCGTGCCTTACTGTGAGGGGCCTGGG
TTCGAGAGCACAATTAGGTCGTAGCAATGGCGCCGTTTTTGGGTAGCCCG
CCGCCCACTGTGGTTagggcggagaaggcagccgtggaggccggggTGCG
GCGAAGTGAACGCTTTAACTTGTTTCGAATCGCGTCTGGGAGGATAAGAA
ACAGGGGAACGCCCCGACATCTTATCCGTACAGGGGCTTTGGACGATGGA
GGGGCGCCCCGCGTGGGGGgtgcgcggggggagggagtctgCGGGCCTTT
CGGACGACAGTGTCCGGAGATAGATGCAAGAGGCCTTACATCTGTGACTC
TTAACATCGGAATGCGACAACGATGGCGGGAACGGATGTTCCTGGCCTCC
TACATAGCGGACGCCTTGGTCTGCGCGGCGCACGAcctcgtcctttcccc
ccacaaGGAAGGCTCCAAACGGCCCGTGTTGCTGGTCCCTGGATGGTGCG
GGCGCACGCGAAGCTTCCGAAAAATGGCTGAGCGCTTGGTGCGCGAGGGT
TACCCCGTGTACCCGGTCCCCTTGGGCTCGCAGTTGGGATGCATCGATCG
GAAGGCGCGGCTTGTGAGCAAATTTCTGGACCTGCACGGCCTCGAGGACG
TGTACGTGGTGGCGCACTCCATGGGCGGGCTCATCAGCGTCCGAAGCATG
ATGAAAGGGGAGACGCGTATCCGGAAGCTGGTGACCATGGGCACGCCCTA
TCGCGGCACACATGTCATCTACCTGGGGTACGCTGTCACTCTGGCCCTGG
ttcttgccctctccttctggctGAGCCCCCTGGCAGGCACCATCTACTTG
GCGCTCTTCCTACAGATCCCTTCCCTCTATCAGATGCAACCGAGCTCGGA
CTTTCTGGAGGAAACGCTCGAGTACTTGAACCGCGTGGCCACGCCTGTTC
AATGCATCTATGCAGTGCGCGACCAGATCGTAATCCACGACTGGCGCCAG
GCCTGGAGTCCGACGCGTCTGGGCCGCCCCGATGATCTATGTCTCCTGGA
GTATGGGCACATGAACCTCTTCATGGGCGAGTCGGGCATCGAACTCGTGG
CCCGCCTTTTGGAGCGGTATGACGCTGCTGacgcctcgctcccttcctct
cgctgcGTGGAGGGAACTACCGCGAGCGTGGaaaagggagcggaggagcg
aGAAGGCGAGTACGTGCCTCCTGCCAAATGTCTGCGAAAGGGACCAACGG
GGGCCGGAGGGTCGCCGCcgcccgggaggaggaaggaaatggggcgggag
gaggaggaatagcGCGGGCATAAAGAAGAGGCTTGGGAGGCATGGGCAGT
GATGACATTCGGACAAGAATAAGCGCTCGAACAATTTTGCTAGGCATCTT
TCTCGGGATGCGGTTCTGACAGGGGGGCAGAGATCGGAGGGCCTGCTGGG
GTGTGCGGAGTAGGGAGCCTGGGGCCCTGGGAATCTCGTGATTTTTGTGT
GCGAGTCTAATCCAGAGACGAGCCCCGAATTTCGGCGCGTAGGGGGCAGC
GAACTAGCCGTTTTCACGTAAGAAAGCTGCATGCATATATTTGTATCATC
GCATGTACGTATTAGATATGTTAACGTTGAGTCTGTAGGTGATGAGCACT
TTGAGCGCGAGGCTGTGTAAGTGCTCTCGGATGGGGCGAGGTCCCAGTGG
TGCAGTCTCGAACTGTTGAGCCACAACTAGGAATAAGAGCACCAAAGATA
GGAGATTGCATTTCATTTTGGCAAATTCATGTCCGCGTTGGAATCGGCAC
ATGTGAAACGGCACCGAAGGAATTAAAATAAACGCATGACGTTGGC back to topCoding sequence (CDS) from alignment at CM002467.1:529267..531612+ >rna6082 ID=rna6082|Name=rna6082|organism=Nannochloropsis gaditana|type=CDS|length=1236bp|location=Sequence derived from alignment at CM002467.1:529267..531612+ (Nannochloropsis gaditana)
ATGGCGCCGTTTTTGGGTAGCCCGCCGCCCACTGTGGTTagggcggagaa
ggcagccgtggaggccggggTGCGGCGAAGTGAACGCTTTAACTTGTTTC
GAATCGCGTCTGGGAGGATAAGAAACAGGGGAACGCCCCGACATCTTATC
CGTACAGGGGCTTTGGACGATGGAGGGGCGCCCCGCGTGGGGGgtgcgcg
gggggagggagtctgCGGGCCTTTCGGACGACAGTGTCCGGAGATAGATG
CAAGAGGCCTTACATCTGTGACTCTTAACATCGGAATGCGACAACGATGG
CGGGAACGGATGTTCCTGGCCTCCTACATAGCGGACGCCTTGGTCTGCGC
GGCGCACGAcctcgtcctttccccccacaaGGAAGGCTCCAAACGGCCCG
TGTTGCTGGTCCCTGGATGGTGCGGGCGCACGCGAAGCTTCCGAAAAATG
GCTGAGCGCTTGGTGCGCGAGGGTTACCCCGTGTACCCGGTCCCCTTGGG
CTCGCAGTTGGGATGCATCGATCGGAAGGCGCGGCTTGTGAGCAAATTTC
TGGACCTGCACGGCCTCGAGGACGTGTACGTGGTGGCGCACTCCATGGGC
GGGCTCATCAGCGTCCGAAGCATGATGAAAGGGGAGACGCGTATCCGGAA
GCTGGTGACCATGGGCACGCCCTATCGCGGCACACATGTCATCTACCTGG
GGTACGCTGTCACTCTGGCCCTGGttcttgccctctccttctggctGAGC
CCCCTGGCAGGCACCATCTACTTGGCGCTCTTCCTACAGATCCCTTCCCT
CTATCAGATGCAACCGAGCTCGGACTTTCTGGAGGAAACGCTCGAGTACT
TGAACCGCGTGGCCACGCCTGTTCAATGCATCTATGCAGTGCGCGACCAG
ATCGTAATCCACGACTGGCGCCAGGCCTGGAGTCCGACGCGTCTGGGCCG
CCCCGATGATCTATGTCTCCTGGAGTATGGGCACATGAACCTCTTCATGG
GCGAGTCGGGCATCGAACTCGTGGCCCGCCTTTTGGAGCGGTATGACGCT
GCTGacgcctcgctcccttcctctcgctgcGTGGAGGGAACTACCGCGAG
CGTGGaaaagggagcggaggagcgaGAAGGCGAGTACGTGCCTCCTGCCA
AATGTCTGCGAAAGGGACCAACGGGGGCCGGAGGGTCGCCGCcgcccggg
aggaggaaggaaatggggcgggaggaggaggaatag back to top
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