Naga_100171g5, gene5876 (gene) Nannochloropsis gaditana

Overview
NameNaga_100171g5
Unique Namegene5876
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:529267..531612 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100171g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:529267..531612 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02000NO14G02000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6082rna6082-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6082rna6082Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6082

>rna6082-protein ID=rna6082-protein|Name=rna6082|organism=Nannochloropsis gaditana|type=polypeptide|length=411bp
MAPFLGSPPPTVVRAEKAAVEAGVRRSERFNLFRIASGRIRNRGTPRHLI
RTGALDDGGAPRVGGARGEGVCGPFGRQCPEIDARGLTSVTLNIGMRQRW
RERMFLASYIADALVCAAHDLVLSPHKEGSKRPVLLVPGWCGRTRSFRKM
AERLVREGYPVYPVPLGSQLGCIDRKARLVSKFLDLHGLEDVYVVAHSMG
GLISVRSMMKGETRIRKLVTMGTPYRGTHVIYLGYAVTLALVLALSFWLS
PLAGTIYLALFLQIPSLYQMQPSSDFLEETLEYLNRVATPVQCIYAVRDQ
IVIHDWRQAWSPTRLGRPDDLCLLEYGHMNLFMGESGIELVARLLERYDA
ADASLPSSRCVEGTTASVEKGAEEREGEYVPPAKCLRKGPTGAGGSPPPG
RRKEMGREEEE
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Synonyms
Publications