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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100171g10.2662.mrna |
| Orig protein id | gnl|cribi|Naga_100171g10.2662 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:521191..523774 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6077 ID=rna6077|Name=rna6077|organism=Nannochloropsis gaditana|type=mRNA|length=1416bp
ATGGGAGATTGGGAACTTCGTATTGTTTGTATGGGAGCCGGCTATGTGGG
TGGACCAACGATGGCCGTCATCGCTAAAAAATGTCCGCGTATCCGCGTGG
CTGTGGTGGACATTTCCACTTCCCAAATTGACGCGTGGAATTCGAAGGAC
CTCCCCATCTACGAGCCGGGCCTGCAGGAGGTGGTCGAGGAGACGAGGGG
CAAGAACCTCTTCTTCTCCGTCGACATCGACGCAGAGGTTGCTGCCGCGG
ACTTGATTTTTGTCTCGGTTAACACTCCAACTAAACTCACGGGTATCGGA
GCCGGACGCGCCGCAAACGTAAAAAACTGCGAGCTGTGCGCCCGGAAGAT
CGCCGAGGTCTCGACCTCTTCCAAGATTGTGGTAGAGAAATCGACAGTGC
CCGTCCGGACCGCGGACGCCGTCCGCCGCGTCCTGGCCACCAACGACAAG
GGCATCAAGTTCCAGGTCCTCTCCAACCCGGAGTTCCTGGCGGAGGGAAC
CGCCATCGATGACTTGATGGACCCCGGGCGGGTCTTGATCGGGGGGGAGC
AGACACCGGACGGGCTGGCCGCCATCGAGAAGCTGGTGAAGGTGTACGCT
CACTGGGTCCCCCGGGAGCGGATCCTGACCACGAACCTCTGGTCCTCGGA
GCTTTCCAAGCTAGTGGCCAACGCCTTCTTGGCCCAGCGCGTCTCCTCCA
TCAACTCCATCTCCGCCTTGTGCGAGGCCACGGACGCGGATGTCTCGGAG
GTGGCGCGGGCCATCGGCTCCGACCACCGGATTGGGTCCAAATTTCTCCA
GGCCTCAGTCGGCTTTGGGGGCTCCTGCTTCCAGAAAGACATCTTGAATC
TGGTCTACTTGTGTGAGAGTTTCGGGCTGGAGGAGGTGGCAGAGTATTGG
AATCAGGTCATCAAGATGAACGACTACCAGAAGTCCCGCTTCTCGTCCCT
GATCGTAAGTCGCATGTTCAACACCGTGACGGGCAAGAGGATCGCCATTT
TTGGATTCGCCTTCAAGAAGGACACGGGGGACACTCGGGAGACGGCTTCA
GTCTTTGTTTGCAGGAATCTCCTGGAGGAGCGCGCACGGCTCCACGTCTT
CGATCCTAAGGTGACGCGGGAGCAGATGATGCTGGAGTTTGAGTACAGCA
CAGGGACGACGGAGAAGACCGTGCCAGGTCTGAACGAGCTCGTGATCACC
GCCGAATGCCCGTACGAGGCGGCAAAGGGGGCCCATGCCATAGCCATCCT
AACCGAGTGGGACGAGTTCAAGAACTATGATTATCAGCGCATCTACGACT
CAATGGCGAAGCCGGCTTTCATCTTTGACGGGCGTAACATCTTGGATCAG
GCCAAGCTAGGCCAGATTGGCTTCGAGCATTACGCCATCGGGAAGCCCCG
GCGCAAGGAGTGGTAG back to topprotein sequence of rna6077 >rna6077-protein ID=rna6077-protein|Name=rna6077|organism=Nannochloropsis gaditana|type=polypeptide|length=804bp
MERARRGGGQGGFGVASMRMTTVSRMTIFFGVVLLVELVTLVCIKHSTLP
RDPAPDTGHMFAHAPESQKEGFSRSQEERRETMAINETLPYEPPRLPSPL
TVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDI
LPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKI
FRSEHKAVEKCRKMARNEAGIKDWAGREGTRSLHINSDVLKSAEGMTEVV
RLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHITG
SGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSILDERSAHAAVE
EARRTLESGGFQIHNGDTGNARPSHNAKRERLASKEARSHIRRHQQGRGA
WEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKYFFCLLNG
GLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLR
TMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQ
PFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIR
STFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEG
PIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQ
KMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSC
GGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAAAAARVEPIKGK
LAAE back to topmRNA from alignment at CM002467.1:521191..523774+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6077 ID=rna6077|Name=rna6077|organism=Nannochloropsis gaditana|type=mRNA|length=2584bp|location=Sequence derived from alignment at CM002467.1:521191..523774+ (Nannochloropsis gaditana)
GGATGAGTTGGTAAGTGGATGCTCATGCCGTCACCTGTCCTTCGCTTCGA
TCTGAACAGGCTTTCTGAAGGGGGAAACGTGTCTTGATCGCGTTCTTCGA
tggagagagcaaggaggggtGGCGGCCAAGGGGGCTTTGGCGTTGCTAGC
ATGCGCATGACCACAGTGTCACGTATGACCATATTCTTTGGTGTAGTGTT
GTTGGTGGAACTGGTTACGCTGGTTTGTATCAAACACTCGACACTCCCCC
GGGATCCTGCGCCGGATACAGGGCACATGTTCGCACACGCGCCTGAATCA
CAGAAAGAAGGTTTTTCACGCTCACAGGAAGAGAGACGTGAGACCATGGC
GATAAACGAAACACTCCCCTACGAACCTCCACGGTTACCTAGTCCCTTGA
CCGTTGcatgtctttcctcccagcGCACGGTGTCCACCACGGCCTTCAAT
CTGGTTCGTATCCTCATGGAACGTGTGGATGCAAATTCTATAAGTGGTTG
GGAACACGACGTAGTCGGCTCTCGGCCTAACGAACGCCTGGAAGATATCC
TTCCGAAGGTGCATGGAAAAGTAAGCACGGTCTACAAGTCCCATGCGGGC
GGAGCCGAGCATCACCAGCACGCCGACTTCGTAGTGGTCACCTACCGAGA
CCCGTACGAGATAATGTGCAGCATGGGGCGCATGTTCCAGCCCAAAATTT
TCAGGAGCGAGCACAAAGCCGTGGAGAAATGTCGTAAGATGGCAAGAAAC
GAGGCCGGGATCAAGGActgggcgggcagggagggaacacGGTCCCTGCA
CATCAACTCCGACGTCTTGAAAAGCGCGGAGGGGATGACGGAGGTAGTGA
GGCTGCTAATGGAAAAGTGGGGTGTACAAGGAGGCAGCCTGGATCCCCGA
AGCATCACCAGGGAGGTGATGGACCTAGAGTCTCCGCCCGAAGGCGTCTT
TTCCGTTGCCAATCCCCGGAGTGAGCTGCACCCCCACCACATCACAGGGT
CGGGGGACACGGAGGGCGACTGCGACGTCTTGAAAGAGGTGCTCGCGCAG
GACCAAGTTTGCCGTGCCTGGCACGACACCTATGCGGCCATGTTCCCGGA
GGGCAGCCCCTCCATCTTGGATGAAAGGTCGGCTCACGccgccgtggagg
aagcgaggcgcACTCTGGAGAGCGGCGGCTTTCAGATCCATAATGGGGAT
ACAGGGAACGCACGGCCGAGCCACAACGCCAAAAGAGAGCGCCTGGCTTC
CAAAGAAGCTAGAAGCCACATAAGAAGGCACCAGCAGGGTCgcggggcgt
gggaggcggaCGACAGGAGCGGGACTGGCGGGCCAGACAAGGAGAGCCAC
AGCCAAATATCTGCTGGCGAGGACGCTTACATGGACGTTCATGCCTCCTC
TGAGACCGCATTTCCTTCCGACAAGTACTTCTTCTGCCTTCTCAACGGCG
GACTGAATGATATCACCGTCGAGATGTGGAAGTGCATCGAGTTCGCCCGG
ACGACCCAGCGAGTTCTTGTTCTCGCGCACGAGAACTACAACCCAGTGGC
CGCTCCGTGGACGCCCTACTTCACCCTGGAGACCATCCCTGGCCTGAGGA
CCATGACCCCTTACCAGGCGGCCACCGCCATCAAccaccgggggagggcc
gtcagcgtcttcccctcgcgcctccagcaccacctcgACCCCTTGCTTGG
CCCCAAGCCCGCACAGGGGGACTCTCCCGAAGGTCTGGATCCCCGACAgc
cctttcctttcaaaTTCGAGAAGCTCAAGCACCTCAAGTTCCGCTTCGAG
AACACCTACCACCAGGACGTGGTCGTTTTTCACCGGCAGGGCAACGTGGG
CTCCGGCGTGGTCGCGCTAAGACACATAAAATTTGCCGAGAGTATTCGAA
GCACGTTTCTTGAACGTTGGTCGAAGCTGGAGAAGCCCTACGTGGCCCTG
CACCTGCGGCGGACTGACAAAAGCTGCAGCGACGAGAAAATGGAGCGATT
GCTTCAGGTCCTACACCGGATGGGAACTTCAGACTTTTGGCCAGAGGGAC
CCATATACGTGGCCAGTGACCATCCAGAATTGCCTGAGGACTTTCgagaa
gagctggaggagaggcaAAAGCGGCAGGTGGTATCTTTCACATATCATCC
GCCGGTGCACGAGCAACGAAATGCCTTGCATGAGGATCCTGATGAGCAAA
AGATGAAGGAGATGCGTCGCCATAGTTTGGGTATAGAAGGCCTTCACTTG
CATGATGACTTGAGCCCCAAGGAGAAGCATCAGACGAACATAGATGCTTT
TGTAGATTTGTTGTTACTCGCCATGTCTGAAGAGCTCCTTACCTCGTGCG
GAGGCTACAGCCATTTGGCAAGGGAGCTGCACCAAAATCAAGACGTTGTC
TTTTCAGTCCTTGGTTTGCCAGCACCAGGACCAAACGATGACCTAGATAT
GCTTTTGGAAGCCGCTGCAGCTGCGAGAGTTGAACCAATAAAAGGAAAGC
TAGCGGCGGAGTAAATAGTTAGGGAAATTCATGCGATGGCCGGGTTTGAT
GGAACTCAAATAAAAAAATAAGTAAAAGAATAGA back to topCoding sequence (CDS) from alignment at CM002467.1:521191..523774+ >rna6077 ID=rna6077|Name=rna6077|organism=Nannochloropsis gaditana|type=CDS|length=2415bp|location=Sequence derived from alignment at CM002467.1:521191..523774+ (Nannochloropsis gaditana)
AtggagagagcaaggaggggtGGCGGCCAAGGGGGCTTTGGCGTTGCTAG
CATGCGCATGACCACAGTGTCACGTATGACCATATTCTTTGGTGTAGTGT
TGTTGGTGGAACTGGTTACGCTGGTTTGTATCAAACACTCGACACTCCCC
CGGGATCCTGCGCCGGATACAGGGCACATGTTCGCACACGCGCCTGAATC
ACAGAAAGAAGGTTTTTCACGCTCACAGGAAGAGAGACGTGAGACCATGG
CGATAAACGAAACACTCCCCTACGAACCTCCACGGTTACCTAGTCCCTTG
ACCGTTGcatgtctttcctcccagcGCACGGTGTCCACCACGGCCTTCAA
TCTGGTTCGTATCCTCATGGAACGTGTGGATGCAAATTCTATAAGTGGTT
GGGAACACGACGTAGTCGGCTCTCGGCCTAACGAACGCCTGGAAGATATC
CTTCCGAAGGTGCATGGAAAAGTAAGCACGGTCTACAAGTCCCATGCGGG
CGGAGCCGAGCATCACCAGCACGCCGACTTCGTAGTGGTCACCTACCGAG
ACCCGTACGAGATAATGTGCAGCATGGGGCGCATGTTCCAGCCCAAAATT
TTCAGGAGCGAGCACAAAGCCGTGGAGAAATGTCGTAAGATGGCAAGAAA
CGAGGCCGGGATCAAGGActgggcgggcagggagggaacacGGTCCCTGC
ACATCAACTCCGACGTCTTGAAAAGCGCGGAGGGGATGACGGAGGTAGTG
AGGCTGCTAATGGAAAAGTGGGGTGTACAAGGAGGCAGCCTGGATCCCCG
AAGCATCACCAGGGAGGTGATGGACCTAGAGTCTCCGCCCGAAGGCGTCT
TTTCCGTTGCCAATCCCCGGAGTGAGCTGCACCCCCACCACATCACAGGG
TCGGGGGACACGGAGGGCGACTGCGACGTCTTGAAAGAGGTGCTCGCGCA
GGACCAAGTTTGCCGTGCCTGGCACGACACCTATGCGGCCATGTTCCCGG
AGGGCAGCCCCTCCATCTTGGATGAAAGGTCGGCTCACGccgccgtggag
gaagcgaggcgcACTCTGGAGAGCGGCGGCTTTCAGATCCATAATGGGGA
TACAGGGAACGCACGGCCGAGCCACAACGCCAAAAGAGAGCGCCTGGCTT
CCAAAGAAGCTAGAAGCCACATAAGAAGGCACCAGCAGGGTCgcggggcg
tgggaggcggaCGACAGGAGCGGGACTGGCGGGCCAGACAAGGAGAGCCA
CAGCCAAATATCTGCTGGCGAGGACGCTTACATGGACGTTCATGCCTCCT
CTGAGACCGCATTTCCTTCCGACAAGTACTTCTTCTGCCTTCTCAACGGC
GGACTGAATGATATCACCGTCGAGATGTGGAAGTGCATCGAGTTCGCCCG
GACGACCCAGCGAGTTCTTGTTCTCGCGCACGAGAACTACAACCCAGTGG
CCGCTCCGTGGACGCCCTACTTCACCCTGGAGACCATCCCTGGCCTGAGG
ACCATGACCCCTTACCAGGCGGCCACCGCCATCAAccaccgggggagggc
cgtcagcgtcttcccctcgcgcctccagcaccacctcgACCCCTTGCTTG
GCCCCAAGCCCGCACAGGGGGACTCTCCCGAAGGTCTGGATCCCCGACAg
ccctttcctttcaaaTTCGAGAAGCTCAAGCACCTCAAGTTCCGCTTCGA
GAACACCTACCACCAGGACGTGGTCGTTTTTCACCGGCAGGGCAACGTGG
GCTCCGGCGTGGTCGCGCTAAGACACATAAAATTTGCCGAGAGTATTCGA
AGCACGTTTCTTGAACGTTGGTCGAAGCTGGAGAAGCCCTACGTGGCCCT
GCACCTGCGGCGGACTGACAAAAGCTGCAGCGACGAGAAAATGGAGCGAT
TGCTTCAGGTCCTACACCGGATGGGAACTTCAGACTTTTGGCCAGAGGGA
CCCATATACGTGGCCAGTGACCATCCAGAATTGCCTGAGGACTTTCgaga
agagctggaggagaggcaAAAGCGGCAGGTGGTATCTTTCACATATCATC
CGCCGGTGCACGAGCAACGAAATGCCTTGCATGAGGATCCTGATGAGCAA
AAGATGAAGGAGATGCGTCGCCATAGTTTGGGTATAGAAGGCCTTCACTT
GCATGATGACTTGAGCCCCAAGGAGAAGCATCAGACGAACATAGATGCTT
TTGTAGATTTGTTGTTACTCGCCATGTCTGAAGAGCTCCTTACCTCGTGC
GGAGGCTACAGCCATTTGGCAAGGGAGCTGCACCAAAATCAAGACGTTGT
CTTTTCAGTCCTTGGTTTGCCAGCACCAGGACCAAACGATGACCTAGATA
TGCTTTTGGAAGCCGCTGCAGCTGCGAGAGTTGAACCAATAAAAGGAAAG
CTAGCGGCGGAGTAA back to top
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