EWM24604.1, cds6062 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24604.1 vs. NCBI_GenBank
Match: gi|585106121|gb|EWM24604.1| (hypothetical protein Naga_100171g10 [Nannochloropsis gaditana]) HSP 1 Score: 1669.83 bits (4323), Expect = 0.000e+0 Identity = 804/804 (100.00%), Postives = 804/804 (100.00%), Query Frame = 0 Query: 1 MERARRGGGQGGFGVASMRMTTVSRMTIFFGVVLLVELVTLVCIKHSTLPRDPAPDTGHMFAHAPESQKEGFSRSQEERRETMAINETLPYEPPRLPSPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWAGREGTRSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHITGSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSILDERSAHAAVEEARRTLESGGFQIHNGDTGNARPSHNAKRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKYFFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAAAAARVEPIKGKLAAE 804 MERARRGGGQGGFGVASMRMTTVSRMTIFFGVVLLVELVTLVCIKHSTLPRDPAPDTGHMFAHAPESQKEGFSRSQEERRETMAINETLPYEPPRLPSPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWAGREGTRSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHITGSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSILDERSAHAAVEEARRTLESGGFQIHNGDTGNARPSHNAKRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKYFFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAAAAARVEPIKGKLAAE Sbjct: 1 MERARRGGGQGGFGVASMRMTTVSRMTIFFGVVLLVELVTLVCIKHSTLPRDPAPDTGHMFAHAPESQKEGFSRSQEERRETMAINETLPYEPPRLPSPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSRPNERLEDILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWAGREGTRSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHITGSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSILDERSAHAAVEEARRTLESGGFQIHNGDTGNARPSHNAKRERLASKEARSHIRRHQQGRGAWEADDRSGTGGPDKESHSQISAGEDAYMDVHASSETAFPSDKYFFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAAAAARVEPIKGKLAAE 804
BLAST of EWM24604.1 vs. NCBI_GenBank
Match: gi|585106618|gb|EWM24985.1| (hypothetical protein Naga_100122g18 [Nannochloropsis gaditana]) HSP 1 Score: 266.159 bits (679), Expect = 1.299e-74 Identity = 151/390 (38.72%), Postives = 220/390 (56.41%), Query Frame = 0 Query: 425 DAYMDVHASSETAFPSDKY---FFCLLNGGLNDITVEMWKCIEFARTTQRVLVLAHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINH---RG-RAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEK---MERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHP--------PVHEQRNALHE------DPDEQKMK-EMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLTSCGGYSHLARELHQNQDVVFSVLGLPAPGPNDDLDMLLEAA 789 DA+ D A S P ++ +CL GG NDI V++W+C+E+A T+RV++L +ENY PV P+ YF L+TIPGL M+ ++AA I H RG R RL + LLG D P PF + ++ F E Y Q ++V+H++GN G+ +RH+ F+E ++ TFL RW ++ KPYV +H+R TD+ C +K + R ++ L R PIY+A+D+PE ++R+E E+ Q R++ SFTY P PV ++R LH+ D +EQ + E H LHL+ L +EKHQTN+D FVDLLLLA S+ + SCGGYS LA+ LHQ++ + + LGL P DD+D +L+ A Sbjct: 306 DAFKDSGAISAGNLPEERVPNMLYCLPGGGFNDIAVQLWRCVEYAIKTERVMILGYENYIPVLPPYEQYFRLKTIPGLSLMSQWEAADRIRHAEARGQRVTKAHGKRLP--ISMLLGNGEETEDGP-------PFFIATASVPNVAFNPEKNYSQHILVYHKKGNRGTPESTIRHVLFSEEVKRTFLLRWGQISKPYVGMHVRGTDRKCGRKKAPQVMRKVKFLRRRLIG-----APIYLATDNPEATIEYRDEFEDNQGRKIFSFTYFPSHQKGVEEPVKDRRMFLHDTGTGQTDTNEQGLAGETDVHI----PLHLNQALKAEEKHQTNVDGFVDLLLLAFSKRFIKSCGGYSQLAKLLHQDKSLALATLGLSLPHDTDDVDSVLQEA 677
BLAST of EWM24604.1 vs. NCBI_GenBank
Match: gi|585099088|gb|EWM19967.1| (hypothetical protein Naga_102579g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 202.986 bits (515), Expect = 6.699e-57 Identity = 93/192 (48.44%), Postives = 125/192 (65.10%), Query Frame = 0 Query: 149 DILPKVHGKVSTVYKSHAGGAEHHQHADFVVVTYRDPYEIMCSMGRMFQPKIFRSEHKAVEKCRKMARNEAGIKDWAGREGTRSLHINSDVLKSAEGMTEVVRLLMEKWGVQGGSLDPRSITREVMDLESPPEGVFSVANPRSELHPHHITGSGDTEGDCDVLKEVLAQDQVCRAWHDTYAAMFPEGSPSIL 340 D++PK G+VS VYKSH E+H ADF +VT+RDPY+++CSMG MF+P F +A+ CR MA NE I A + G+ +LH++ L SAE M +VV + KW V GG +D R + REV++L +PPEG+F VA+PR+ELH HIT S T+ DC L+ L D VCRAWHD Y FP G+ ++ Sbjct: 2 DVVPKAKGQVSMVYKSHWADQEYHNSADFFLVTHRDPYDMVCSMGNMFRPVFFTDFKRAISSCRGMADNEKRILRVASKSGS-ALHVHHSALYSAESMAQVVEAMALKWNVTGGKIDARGVAREVLELRAPPEGIFPVAHPRTELHADHITASSSTKKDCTELRRALEADSVCRAWHDRYEQSFPPGTAQLV 192
BLAST of EWM24604.1 vs. NCBI_GenBank
Match: gi|585106631|gb|EWM24996.1| (hypothetical protein Naga_100068g30, partial [Nannochloropsis gaditana]) HSP 1 Score: 79.7221 bits (195), Expect = 3.974e-14 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0 Query: 88 TLPYEPPRLP---SPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWEHDVVGSR 142 T+P E P LP PL VACL++ RTVSTTA+NL R+LMERVD NS+SGWE DV GS+ Sbjct: 62 TVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDPNSVSGWEKDVTGSK 119
BLAST of EWM24604.1 vs. NCBI_GenBank
Match: gi|585106628|gb|EWM24994.1| (hypothetical protein Naga_101727g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 75.485 bits (184), Expect = 2.277e-12 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0 Query: 88 TLPYEPPRLP---SPLTVACLSSQRTVSTTAFNLVRILMERVDANSISGWE----HDVVGSR 142 T+P E P LP PL VACL++ RTVSTTA+NL R+LMERVD+NS+SGWE DV G + Sbjct: 83 TVPLEDPPLPRLSKPLIVACLANMRTVSTTAYNLARVLMERVDSNSVSGWEKNPIQDVAGKK 144
BLAST of EWM24604.1 vs. NCBI_GenBank
Match: gi|1200699691|gb|OUX93666.1| (hypothetical protein CBB77_08310 [Henriciella sp. TMED17]) HSP 1 Score: 74.7146 bits (182), Expect = 7.387e-11 Identity = 88/346 (25.43%), Postives = 144/346 (41.62%), Query Frame = 0 Query: 442 KYFFCLLNGGLNDITVEMWKCIEFARTTQRVLVL--AHENYNPVAAPWTPYFTLETIPGLRTMTPYQAATAINHRGRAVSVFPSRLQHHLDPLLGPKPAQGDSPEGLDPRQPFPFKFEKLKHLKFRFENTYHQDVVVFHRQGNVGSGVVALRHIKFAESIRSTFLERWSKLEKPYVALHLRRTDKSCSDEKMERLLQVLHRMGTSDFWPEGPIYVASDHPELPEDFREELEERQKRQVVSFTYHPPVHEQRNALHEDPDEQKMKEMRRHSLGIEGLHLHDDLSPKEKHQTNIDAFVDLLLLAMSEELLT----------SCGGYSHLARELHQNQDVVFSVLGLPA 775 KY C GGLNDI ++ KC + R +++ HEN ++ YF P + + +A AI + ++VFP+ +Q L+ QGD L + E + L F F+ Y Q V++ H G V AL I I ER K+ + Y A+H+R TD +D K L S + P+++A+D+ + F++ L E +V SF+ P E++ ALH DD + + N DA +DLL+L+++ L + G+S LA L +++ ++ ++L P Sbjct: 3 KYILCRPEGGLNDILCQIEKCCRYGERYNRTVIVDTNHENARNFHDDFSRYF----FPKHKRLIL--SAKAIKPKLALMNVFPTGVQGKLNNY--QTKWQGDWRGKL-------LEVESNQLLTFDFDKHYSQQVLLHHSTGGGTDSVFALLRIGVRPHIIKKLSERLQKIGRVYDAVHVRHTDYK-TDYK-----SFLDNYSAS---SQRPLFLATDNKSVVTHFKQALGE---NRVFSFSALP---EKQIALHSAK-------------------FSDDATFRR----NTDAILDLLMLSLAVRLQIFQINQNPIGATVSGFSQLALNLWESKILIKTLLSNPG 295 The following BLAST results are available for this feature:
BLAST of EWM24604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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