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Properties
Property Name | Value |
Product | dead-box atp-dependent rna helicase 29-like protein |
Orig transcript id | gnl|cribi|Naga_100117g7.397.mrna |
Orig protein id | gnl|cribi|Naga_100117g7.397 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002467.1 | supercontig | CM002467.1:483161..486148 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6065 ID=rna6065|Name=rna6065|organism=Nannochloropsis gaditana|type=mRNA|length=3120bp ATGGCGACACAATTAGTTACAAAGCTCCGCTTGGCGGCCAAAAGCTTGCC CTCCAAGGTCTTCATGTGCAGCGGTGGTTGTTCTTCAGGCCTGGACCTCG GCCGCCGTCTGCCACTTCAAGCCATGCACATGCGCAGGGCTTTGTCGACC CAGGTGCAAGAGTCTTTTATGTCCGGTGGTAATTCGGTGTATGTGGAAGA AATGTATCGGGCTTGGTTAAAAGACAGGGGCAGTGTGCACAAATCTTGGG ACGCTTATTTCAGTGCACTTGAGGCTGGACAAACCGAGAACGCTTTCGTG CCTGCCCCTGGGCTGCAAACAGCCGTCTCCGCGCCAGGACCTGACATTGC GCCGCGAACCATAGTCTCTGACTCGCTCGGCCTCAGTTATTTGATTCGCG CGTACCAGTTCCGCGGGCACGAAGCCGCCAATTTGGATCCGCTAGGTCTG CACTCCTTCCGGCCCGCAAACGCTCCGCCAGAGCTCGATTACAAATACCA TGGATTCAGCGATGACGACCTGGACCGGGTGCTCAATTTGAAAGGCTCCC ACAAGGGGGGGCATAAGGGCTTTTTGTACGATCTGGCTAAGGGAAAGCCC GTGACTTTGCGGAAGGTGATGGATACCCTGCGTCAGACGTACTGCCAGAC CCTCGGCGTCGAATACATGCACATGGGGTCTCGCGACAAGTGCAACTGGA TCCGCGCACGCGTGGAGACTCCGTTGTGGCTTTCCTACAGCAAAGAGAAA AAGCTTCATATCTTTGAGCGTCTCGCTTATGCTGACCACTTCGAACGCTT CTTAGGCAACAAATACAACACAGCGAAGCGCTTCGGATTGGACGGAGGGG AGTCAGTCATCCCAGGCCTGAAGATGATGATTGATCGTGCCAGCGAAATG GGTGTCACGGACTTTGTCTTCGGCATGCCTCATCGTGGGCGTCTCAACGT ACTCGTCAATGTCCTTCGCAAGCCCATGCAGCTCATGTTTCAGGAATTTC AGGGGACGCACTACCGAATGGAGAAGTATGGAATAAAGAAAGACGATTGG TCCATGTCGGGAGACGTGAAGTATCACTTGGGAACCTCCATGACGCGCTC GTACCCTGACGGCCGCACTGTCCACTTGTCGCTCCTTGCTAACCCCTCCC ACCTCGAAGCAGTCAATACGGTGGTGGGGGGCAAGACTCGAGCCAAGCAG TTCTACATGGGGGACAGAAGCGAGGATACGAAGAAGGTGATCCCGGTTCT CATGCATGGCGACGCGGCCTTCGCGGGTCAGGGCATCGTGTACGAGACCA TGCAACTGGCCAAAGTCCGCGAGTTTGCCACAGGCGGCACCATCCACATC GTGGTCAACAACCAGGTGGGCTTTACCACGGACCCGTCCTCTTCCCGCTC CACGCGTTACTGCACGGATCTGGGGAAAGCTTTCGATATTCCCATTTTCC ACTGCAACGGCGATGACCCCCTTTCCGTCACCACCGCTTTCGAATTGGCC GTCGACTGGCGTCAGGCTTGGGGGGAAGACTGTATCATTGACGTTGTTTG CTACCGTCGGCATGGGCATAACGAGCTGGATCAGCCCCTGTTCACTCAGC CGCTGCTCTACAGTCAAATCCAAAAGCATCCGTCCACCTTGGAGATTTAT CACGATCGCCTGATGAAGGACGGGACGGCCACGGAGGCAGAACTACAGGC GATCACAGCGGAAGTGCATGCTGCCTATGACAAGGCGTTCGAGGAATCGA AGACCTGGCAGGCAGCCAAGGACGACTGGCTCTCCTCCAAATGGGATGGC TTCAAGTCTCCGGGGCAGAGGTCGCGCGTGCGGGAGACGGGTATTCACGT CGACCGGCTGCGAGAAATCGGAGCCAAGATCGGGAGTGTGCCCGAGGGCT TCGTGTTGCACAGACAGCTGGAAAAGATTTTGGCGGCGCGTCGGAAAACC GTGGAGGAAGGAAAAGGGATCGATTGGGGCACAGCCGAGGCGCTCGCCTT TGGGACGCTGCTTCTGGAGGGAAATCACGTGCGCCTGACGGGGCAGGATG TGGAGCGAGGAACCTTCTCGCATCGGCACTGCGTGCTGCACGATCAGAAG ACGAATGAGACGTACACACCACTTAATCACATCCGGCCTCAGATAACTAA TGTCCGTAGCACCAGGGACCCGCCCATTCCCAACTCCCAGGCGCGCTTCA TCGCGCGGAACAGTATCCTCTCCGAATACGGAGTGCTGGGGTTCGAGCTC GGCTACTCTTTGGAGAATCCGAACAATCTGACACTATGGGAGGCACAATT TGGAGACTTCTCGAATGGCGCGCAGATTATGATCGACCAATTCATCGCGT CGGGTGAGAACAAGTGGCTCCGTCAGTCGGGCTTGGTCATGTTGCTGCCG CATGGCTACGACGGACAAGGACCTGAGCACAGCTCTTGCCGCCCGGAGCG CTTCCTACAGATGGTAGATGAAGATGAGGACGTCATTCCGCCTATGGGGG AGGAGGAGCGTCAGCAGATCCAACACACGAATTGGCAGGTGGTGAACTGC ACCACGCCCGCGAACTATTACCACGTGCTACGTCGTCAGGTTCATCGGGA TTTCCGCAAGCCCTTGATTGTAATTGCGCCCAAGAATCTGCTGAGGCATA AGCTAGCTGTGTCTAATTTGGAAGACATGGGGGAAGGGACGCGCTTCCGC CGCATTGAACGAGAGAAATGCCCTGACATCCGGGCGCATCATGAGAAGGT GACCAAGGTGGTCTTTGTGACGGGCAAAATCTACTACGAGCTTTTCCAGG AGCGTGAAGCGCGTGGTATCAAGGACACTGCCATCGTGCGGATTGAACAG CTGGCCCCTTTTCCCTTCGATAAGGTCGCTGATGAGCTCAGCCGATACCC GAACGTGCAGAAGGTGGTGTGGTGCCAAGAGGAGCCCAAGAATGGCGGAG CCTACTTTTACTGTGCCCCGCGTATTAGAACTGCTAGTCGAGATATATTA AATAAGGATTTGCAACCAATCTATGTCGGCCGTGCGCCCATGGCGGCACC GGCGGGGGGGCTGGCAAAGGTTCACGCCAAGGAACAGCAAGGCATTTTGG ACGGAGTTTTTGCATTGTAG back to topprotein sequence of rna6065 >rna6065-protein ID=rna6065-protein|Name=rna6065|organism=Nannochloropsis gaditana|type=polypeptide|length=995bp MCDVAVPSLFLGGRPFSFIKLHNALHHTFFLLPVQIPVSIQQPASLMPSS SRLKQNGHSVNDVMDQNVADNAYCDDEAIDDGQKIFAGISRPASQRGNGG SKGRKIAKGTFQSLGLSKDVFAGINRMGYKLPTPVQRKSLPEALAGKDVV CMARTGSGKTAAFLIPVLEKLQSHSPRVGARALILSPTRELAMQTIKFAK GLSHFTDLRVALLVGGDSMDDQFEALSRNPDIIIGTPGRVMHHLQEVPDF SLAAVQMAVFDEADRLFEMGFAEQIKEILRTMPEERQTLLYSATLPKMLA QFARAGLQDPQLIRLDTESKVSEQLCLSFFTVRSGNKTAALLFLVREILP RDKLTIIFAATKHHVEYLQEVFSEIGLPCSAIFGAMDFEARKLNLERFRH GRVRYLIVTDVAARGIDVPLLDYVINYSFPPLPKLFVHRVGRAARQGRSG AAFSLVEPEEMAYMVDLHLFLGRSPQNVFKAGGYQGYTLTEMKPDMVHFG GLPQHLLDEENESLRLLTERNGGVLTSLWRVCENAMKQYRRTRPDPSKAA IRRAKALVGAEEGDMHVHPLLLGSDPKRMTAGGGLESLRAKEEMVKMLQG FRPQQTVLEVQRIDAGSLYKGLPVGERNRAVAGMGGAKSDVEAGIKVMRA IRKEHGSAIKRKREKMANKQSQRAGLEREVDGEASEENASMVDCSRADKD RGEHQCEAQPRPSGSDKAKLSKAARRRLKKSAADTLDPGEHKMSQDLNGK RDLRAKDYKDPNHFIEYGVTEHDQMVEDRLQPRSVEKGSEALLANRLEEA LLDVQPDEALEMVKRKRIMHWDARKKKYVRATMSELGEGRGQKKLRTESG VTVSGSSQATGEIYKKWQKRTNKTVSLAGGDEDDGNEGGGEEGTGSKRGV YGQREDDAGRFMGVKKYRHVQNKQAQVETGRGTGGRKAREELKTAGQILK ERQKKERERLRLAKKNGPGGRGGRGAGNRRAGGGRGGNFKTMGKR back to topmRNA from alignment at CM002467.1:483161..486148+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6065 ID=rna6065|Name=rna6065|organism=Nannochloropsis gaditana|type=mRNA|length=2988bp|location=Sequence derived from alignment at CM002467.1:483161..486148+ (Nannochloropsis gaditana) ATGTGTGACGTAGCCGTCCCCTCACTTTTCTTAGGTGGACGCCCTTTTTC
GTTCATCAAACTGCACAATGCCTTGCACCACACGTTCTTTCTACTACCTG
TACAGATCCCCGTCTCCATTCAACAGCCAGCTTCCTTAATGCCTTCGAGC
AGCAGATTGAAGCAGAATGGTCACAGCGTGAACGATGTTATGGACCAAAA
TGTGGCAGACAATGCATATTGTGATGATGAAGCAATAGACGATGGCCAAA
AAATCTTCGCAGGTATATCCCGTCCCGCTTCGCAGAGGGGTAATGGCGGT
agcaaggggagaaaaatTGCCAAAGGCACGTTCCAGTCGCTCGGATTGAG
CAAGGATGTCTTTGCCGGGATCAATCGAATGGGATACAAACTGCCAACAC
CCGTGCAACGTAAATCGCTCCCTGAGGCTCTGGCAGGGAAGGACGTAGTG
TGCATGGCACGTACGGGTTCAGGAAAGACGGCTGCCTTTCTAATCCCTGT
TCTCGAAAAGCTTCAATCACACTCACCCCGTGTGGGAGCGCGCGCGCTGA
TATTGTCTCCAACACGGGAGCTAGCTATGCAGACAATCAAGTTTGCGAAG
GGGCTGAGCCATTTTACGGACCTGCGGGTGGCTTTATTGGTTGGCGGAGA
CTCGATGGATGACCAGTTTGAGGCTCTCAGCCGCAACCCTGATATCATTA
TAGGGACGCCAGGCCGTGTCATGCATCATTTGCAAGAAGTTCCAGATTTC
TCTCTCGCTGCTGTGCAAATGGCCGTTTTCGACGAGGCAGATAGACTCTT
TGAAATGGGTTTCGCGGAGCAAATAAAAGAAATCCTTCGTACGATGCCAG
AGGAGCGACAGACGCTTCTCTATTCAGCCACACTTCCCAAGATGCTTGCC
CAATTTGCTCGCGCAGGGCTGCAGGACCCACAGTTGATACGTTTAGATAC
AGAAAGCAAAGTGTCAGAGCAGCTATGTTTGAGCTTCTTCACGGTGCGAT
CAGGAAACAAGACTGCCGCCTTGCTGTTTCTAGTCAGGGAGATCCTTCCC
CGGGACAAGCTTACGATCATCTTTGCGGCCACCAAGCATCATGTGGAGTA
CTTACAGGAGGTCTTCTCCGAGATAGGATTGCCTTGCTCAGCCATCTTTG
GTGCCATGGATTTCGAAGCCCGAAAGCTCAACTTAGAGCGATTCCGCCAT
GGTCGGGTCCGTTATTTGATCGTCACGGACGTAGCCGCGCGCGGCATCGA
TGTCCCTCTTCTTGATTACGTGATCAATtattctttccccccgcttCCGA
AGCTTTTCGTTCACCGCGTGGGCCGGGCGGCGCGGCAAGGACGGAGCGGC
GCCGCTTTCAGCCTGGTTGAGCCCGAGGAGATGGCCTACATGGTCGatct
ccatctcttcctggGGAGGTCGCCCCAGAATGTTTTCAAGGCGGGCGGCT
ATCAGGGCTACACCTTGACTGAAATGAAGCCGGATATGGTACACTTCGGC
GGCCTCCCGCAGCATCTTCTGGACGAGGAAAATGAGAGTCTGCGCCTCCT
CACTGAAAGAAACGGGGGAGTGCTCACCTCTCTCTGGCGAGTGTGCGAGA
ACGCCATGAAGCAGTACAGGCGTACTCGTCCAGACCCCTCAAAGGCCGCT
ATTCGCCGAGCCAAGGCGCtcgtgggggcggaggaaggtgacATGCACGT
CCACCCGCTCTTGCTCGGTAGCGACCCGAAGCGCATGACGGCCGGCGGAG
GGCTGGAGAGCTTGcgcgccaaggaggagatggtgaagaTGCTGCAGGGT
TTCCGGCCCCAGCAGACGGTCTTGGAGGTGCAGAGAATAGATGCAGGCTC
GCTGTATAAAGGATTGccggtgggggagaggaacagGGCCGTAGCGGGGA
TGGGTGGAGCGAAGTCAGACGTGGAAGCGGGGATCAAGGTGATGCGAGCC
ATCCGCAAGGAGCACGGCAGTGCCATCAAACGAAAGCGAGAGAAAATGGC
GAATAAGCAAAGTCAGCGGGCGGGACTTGAACGGGAAGTTGATGGGGAAG
CAAGTGAAGAGAATGCAAGTATGGTTGATTGCAGTCGTGCGGACAAGGAT
AGGGGCGAACATCAATGTGAAGCACAGCCACGACCCTCCGGTTCAGACAA
GGCCAAGCTGTCGAAAGCCGCGCGGCGCCGATTGAAGAAAAGTGCAGCCG
ATACGCTTGATCCAGGTGAGCACAAGATGTCGCAGGACTTGAACGGAAAG
CGGGACCTGCGCGCGAAGGATTACAAAGACCCTAATCATTTCATCGAGTA
CGGAGTGACAGAGCACGATCAAATGGTGGAAGATCGACTACAGCCGAGGT
CGGTTGAAAAGGGTTCAGAGGCGTTGCTAGCCAACCGGCTGGAAGAGGCT
TTACTGGACGTGCAGCCcgacgaggccttggagatgGTGAAAAGAAAGCG
GATCATGCACTGGgacgcgaggaagaagaagtacGTGCGAGCGACCATGT
CGGAGCTGGGCGAGGGCCGGGGCCAGAAGAAACTCCGGACTGAGAGCGGG
GTGACGGTGTCAGGAAGCAGCCAGGCCACCGGGGAAATATACAAGAAGTG
GCAGAAGAGGACCAACAAGACGGTTTCACtggcgggaggggatgaggatg
acgggaatgaaggcggcggggaggagggcaccgGGTCGAAGCGCGGGGTT
TACGGTCAGCGGGAGGATGACGCAGGACGTTTTATGGGCGTGAAGAAATA
TCGGCACGTGCAAAATAAACAGGCGCAGGTGGAGACAGGTCgtgggacgg
gagggcgcAAAGCTCGAGAGGAGCTTAAGACTGCCGGACAGATCCTTAAA
GAGCGtcaaaagaaagaaagggagcgacTGCGATTGGCCAAGAAAAATGG
ACCTGGAGGTAGAGGCGGCCGGGGAGCTGGGAATCGCCGggctgggggcg
ggaggggagggaattTCAAAACGATGGGCAAAAGATAA back to topCoding sequence (CDS) from alignment at CM002467.1:483161..486148+ >rna6065 ID=rna6065|Name=rna6065|organism=Nannochloropsis gaditana|type=CDS|length=2988bp|location=Sequence derived from alignment at CM002467.1:483161..486148+ (Nannochloropsis gaditana) ATGTGTGACGTAGCCGTCCCCTCACTTTTCTTAGGTGGACGCCCTTTTTC GTTCATCAAACTGCACAATGCCTTGCACCACACGTTCTTTCTACTACCTG TACAGATCCCCGTCTCCATTCAACAGCCAGCTTCCTTAATGCCTTCGAGC AGCAGATTGAAGCAGAATGGTCACAGCGTGAACGATGTTATGGACCAAAA TGTGGCAGACAATGCATATTGTGATGATGAAGCAATAGACGATGGCCAAA AAATCTTCGCAGGTATATCCCGTCCCGCTTCGCAGAGGGGTAATGGCGGT agcaaggggagaaaaatTGCCAAAGGCACGTTCCAGTCGCTCGGATTGAG CAAGGATGTCTTTGCCGGGATCAATCGAATGGGATACAAACTGCCAACAC CCGTGCAACGTAAATCGCTCCCTGAGGCTCTGGCAGGGAAGGACGTAGTG TGCATGGCACGTACGGGTTCAGGAAAGACGGCTGCCTTTCTAATCCCTGT TCTCGAAAAGCTTCAATCACACTCACCCCGTGTGGGAGCGCGCGCGCTGA TATTGTCTCCAACACGGGAGCTAGCTATGCAGACAATCAAGTTTGCGAAG GGGCTGAGCCATTTTACGGACCTGCGGGTGGCTTTATTGGTTGGCGGAGA CTCGATGGATGACCAGTTTGAGGCTCTCAGCCGCAACCCTGATATCATTA TAGGGACGCCAGGCCGTGTCATGCATCATTTGCAAGAAGTTCCAGATTTC TCTCTCGCTGCTGTGCAAATGGCCGTTTTCGACGAGGCAGATAGACTCTT TGAAATGGGTTTCGCGGAGCAAATAAAAGAAATCCTTCGTACGATGCCAG AGGAGCGACAGACGCTTCTCTATTCAGCCACACTTCCCAAGATGCTTGCC CAATTTGCTCGCGCAGGGCTGCAGGACCCACAGTTGATACGTTTAGATAC AGAAAGCAAAGTGTCAGAGCAGCTATGTTTGAGCTTCTTCACGGTGCGAT CAGGAAACAAGACTGCCGCCTTGCTGTTTCTAGTCAGGGAGATCCTTCCC CGGGACAAGCTTACGATCATCTTTGCGGCCACCAAGCATCATGTGGAGTA CTTACAGGAGGTCTTCTCCGAGATAGGATTGCCTTGCTCAGCCATCTTTG GTGCCATGGATTTCGAAGCCCGAAAGCTCAACTTAGAGCGATTCCGCCAT GGTCGGGTCCGTTATTTGATCGTCACGGACGTAGCCGCGCGCGGCATCGA TGTCCCTCTTCTTGATTACGTGATCAATtattctttccccccgcttCCGA AGCTTTTCGTTCACCGCGTGGGCCGGGCGGCGCGGCAAGGACGGAGCGGC GCCGCTTTCAGCCTGGTTGAGCCCGAGGAGATGGCCTACATGGTCGatct ccatctcttcctggGGAGGTCGCCCCAGAATGTTTTCAAGGCGGGCGGCT ATCAGGGCTACACCTTGACTGAAATGAAGCCGGATATGGTACACTTCGGC GGCCTCCCGCAGCATCTTCTGGACGAGGAAAATGAGAGTCTGCGCCTCCT CACTGAAAGAAACGGGGGAGTGCTCACCTCTCTCTGGCGAGTGTGCGAGA ACGCCATGAAGCAGTACAGGCGTACTCGTCCAGACCCCTCAAAGGCCGCT ATTCGCCGAGCCAAGGCGCtcgtgggggcggaggaaggtgacATGCACGT CCACCCGCTCTTGCTCGGTAGCGACCCGAAGCGCATGACGGCCGGCGGAG GGCTGGAGAGCTTGcgcgccaaggaggagatggtgaagaTGCTGCAGGGT TTCCGGCCCCAGCAGACGGTCTTGGAGGTGCAGAGAATAGATGCAGGCTC GCTGTATAAAGGATTGccggtgggggagaggaacagGGCCGTAGCGGGGA TGGGTGGAGCGAAGTCAGACGTGGAAGCGGGGATCAAGGTGATGCGAGCC ATCCGCAAGGAGCACGGCAGTGCCATCAAACGAAAGCGAGAGAAAATGGC GAATAAGCAAAGTCAGCGGGCGGGACTTGAACGGGAAGTTGATGGGGAAG CAAGTGAAGAGAATGCAAGTATGGTTGATTGCAGTCGTGCGGACAAGGAT AGGGGCGAACATCAATGTGAAGCACAGCCACGACCCTCCGGTTCAGACAA GGCCAAGCTGTCGAAAGCCGCGCGGCGCCGATTGAAGAAAAGTGCAGCCG ATACGCTTGATCCAGGTGAGCACAAGATGTCGCAGGACTTGAACGGAAAG CGGGACCTGCGCGCGAAGGATTACAAAGACCCTAATCATTTCATCGAGTA CGGAGTGACAGAGCACGATCAAATGGTGGAAGATCGACTACAGCCGAGGT CGGTTGAAAAGGGTTCAGAGGCGTTGCTAGCCAACCGGCTGGAAGAGGCT TTACTGGACGTGCAGCCcgacgaggccttggagatgGTGAAAAGAAAGCG GATCATGCACTGGgacgcgaggaagaagaagtacGTGCGAGCGACCATGT CGGAGCTGGGCGAGGGCCGGGGCCAGAAGAAACTCCGGACTGAGAGCGGG GTGACGGTGTCAGGAAGCAGCCAGGCCACCGGGGAAATATACAAGAAGTG GCAGAAGAGGACCAACAAGACGGTTTCACtggcgggaggggatgaggatg acgggaatgaaggcggcggggaggagggcaccgGGTCGAAGCGCGGGGTT TACGGTCAGCGGGAGGATGACGCAGGACGTTTTATGGGCGTGAAGAAATA TCGGCACGTGCAAAATAAACAGGCGCAGGTGGAGACAGGTCgtgggacgg gagggcgcAAAGCTCGAGAGGAGCTTAAGACTGCCGGACAGATCCTTAAA GAGCGtcaaaagaaagaaagggagcgacTGCGATTGGCCAAGAAAAATGG ACCTGGAGGTAGAGGCGGCCGGGGAGCTGGGAATCGCCGggctgggggcg ggaggggagggaattTCAAAACGATGGGCAAAAGATAA back to top
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