Naga_100117g7, gene5860 (gene) Nannochloropsis gaditana

Overview
NameNaga_100117g7
Unique Namegene5860
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:483161..486148 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100117g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:483161..486148 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL025ngnoL025Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01850NO14G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6065rna6065-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6065rna6065Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6065

>rna6065-protein ID=rna6065-protein|Name=rna6065|organism=Nannochloropsis gaditana|type=polypeptide|length=995bp
MCDVAVPSLFLGGRPFSFIKLHNALHHTFFLLPVQIPVSIQQPASLMPSS
SRLKQNGHSVNDVMDQNVADNAYCDDEAIDDGQKIFAGISRPASQRGNGG
SKGRKIAKGTFQSLGLSKDVFAGINRMGYKLPTPVQRKSLPEALAGKDVV
CMARTGSGKTAAFLIPVLEKLQSHSPRVGARALILSPTRELAMQTIKFAK
GLSHFTDLRVALLVGGDSMDDQFEALSRNPDIIIGTPGRVMHHLQEVPDF
SLAAVQMAVFDEADRLFEMGFAEQIKEILRTMPEERQTLLYSATLPKMLA
QFARAGLQDPQLIRLDTESKVSEQLCLSFFTVRSGNKTAALLFLVREILP
RDKLTIIFAATKHHVEYLQEVFSEIGLPCSAIFGAMDFEARKLNLERFRH
GRVRYLIVTDVAARGIDVPLLDYVINYSFPPLPKLFVHRVGRAARQGRSG
AAFSLVEPEEMAYMVDLHLFLGRSPQNVFKAGGYQGYTLTEMKPDMVHFG
GLPQHLLDEENESLRLLTERNGGVLTSLWRVCENAMKQYRRTRPDPSKAA
IRRAKALVGAEEGDMHVHPLLLGSDPKRMTAGGGLESLRAKEEMVKMLQG
FRPQQTVLEVQRIDAGSLYKGLPVGERNRAVAGMGGAKSDVEAGIKVMRA
IRKEHGSAIKRKREKMANKQSQRAGLEREVDGEASEENASMVDCSRADKD
RGEHQCEAQPRPSGSDKAKLSKAARRRLKKSAADTLDPGEHKMSQDLNGK
RDLRAKDYKDPNHFIEYGVTEHDQMVEDRLQPRSVEKGSEALLANRLEEA
LLDVQPDEALEMVKRKRIMHWDARKKKYVRATMSELGEGRGQKKLRTESG
VTVSGSSQATGEIYKKWQKRTNKTVSLAGGDEDDGNEGGGEEGTGSKRGV
YGQREDDAGRFMGVKKYRHVQNKQAQVETGRGTGGRKAREELKTAGQILK
ERQKKERERLRLAKKNGPGGRGGRGAGNRRAGGGRGGNFKTMGKR
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Synonyms
Publications