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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100117g17.412.mrna |
| Orig protein id | gnl|cribi|Naga_100117g17.412 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:457039..460319 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6056 ID=rna6056|Name=rna6056|organism=Nannochloropsis gaditana|type=mRNA|length=1981bp
CAGCGTCCAGGTGCTTACACAGGGCGGTCACCTACATAGCTTACAAGGCC
TTACAGGGTTGCCTATTCGTATCAAACCTTTTACTTTCCTACACATCAGT
ACAGAAATTTGTCAAAAACCCATGTCAAAAAATCCTAGCATACAGGATTT
TCAATCAAGAACTTTCAGCATTCGACAGGACTCGAAACAAGCCCGGAATT
TGGAATCACTTCGTACATCGGGAAGTATTCTTAGCCCAGTGAAGCCTGCA
TCGATTCGACGCCTCCGATTAGTCAGCAAACGTGCTATTCAGGACCGAGA
CGATTTTCACATCCTTCTATTTGGCTCGTTTTGTCTATGTTTCAATGCTA
GTTTTGTAAATTTGGTAACCTTCAGCAGCTACCTAAAATTAGCAACGGCG
CACGTCACTGGTCTCGTGGCTCGTGCCTCTCAGACAATCGCTGACGGTGC
TTGGCAACTCGTCTATCTCCCAATTTCTGTTTTTCTTTGCTTCTTGGTGG
GGTCTGTCGTTGGAGGATATACCGTCTCTCATGAGACATTCTATCTAGGA
CGATCCTATGGGCGAGCGCTTCTCACAATCGCCCTTCTGCAAGGCTCGGC
TCTTGTCGTCAACAAAGTTCACGTGGACGAGGGACACGTGCAACACTACT
ACATCTACGTCTGCGCTGTTGCCATGGGTCTCCAGAACTCCCTGACTAGC
AAGTACTCGGGTAATACGCTGCGTACCACTCACGTCACGGGTGCGACTAC
AGATTTGGGAATTGCGATCGGCCACCTCTTGAAGGGCCGGAGGGGTGACC
TCTGGAAGGTTAAGTTGCACTCCACAGCCATTTTAGGCTTTCTGGTTGGT
GGTGTCATGGGTCGACTTGCCTACCTCCGCTTCGAGGAAACTGCACTACT
TTTCAATGTGACCATAATGACTGTGTTGGGCCTAAGCCATTTACTCTGGA
TCAGTAGGCGCAAGGGTCTTTCGCTCTGGAAGGTATTCAAATCTACCACA
GACCTCAAAGTCGACATGGCCCCGGCACACGAACCGTCTCCAAACGAGAC
ACCAACATCACCCGCCGAAATGCGAGAGCCTACTTCCCATCTAGCCAGCT
CAGGAACGAAGGGCACCAGTGCGTCTGTCGAGTATTCTCGCACTATCAGC
CTCTTGGCCTTGGAGAGAACTAGCAGCAGTCGCCTCGGAGATCGACCCAT
TTCACGCGAGATATCCGCTTCGTTCAAAGCGCAGAGTTCCATAAGCACTT
CTTCCTCAGCCAAAATTTTGTCACTCCAATCATTTGGCGACTCGCAAGAG
TCTTGCGGCGTGGTTCATCGCCCTGCTAATCGCAGTACCAGCTTGGAGTG
TATTTCCGGACAGAGCCCCTCTCCTTGTCCGACAGCAGGCACTTCGGATA
TTAAAGCTTCGTACCAATTGCCTCGAATCCCACCGTCCGGAAGCGGAGGG
GTCGATCAAGCCGGGGCCCATCGCCAGCTTCCTTCCTTTCCGTCAACAAT
GAGTGGGAGTCCGCCGCGCGTCATTCAGGTGGAGGCGGAAGTGCATGAGG
AGGACGAGGATGCGTCGCTGGATGATAGTGAAGACGTAGACGAATACAGT
GTTGGGGACGTAGCGGGAGAGGTGAGCTGTGACGACTACGATCTCGTCCG
GGACCCCCTGGACGGGAGGCTCGTTGAGGTACTCGTCCGCGTCCACGAGG
CAGCGCCCGACGAGCCCGAGCCGTCCCAGTCAAGCCAGCAAGCGCTTGAC
GGCTGGTCTCAGGGTACCAGGCACACGCACGCTCCCGAATGATAATTGTA
GAACTAATGTTTTGCCGCATTCGCTGACGAAGCCAAAAGCAAGGAATAGG
GTCAAAGACAAACAAACAGCGATGGCTCAAAACTCTAGTTTACCTACGAA
ATTTAACCAGTAGTACTCTCCTGACATATAGTACAAATAAAATTGGACCC
TTCCACAATCATCTTTTAGAGAATGCCTTGT back to topprotein sequence of rna6056 >rna6056-protein ID=rna6056-protein|Name=rna6056|organism=Nannochloropsis gaditana|type=polypeptide|length=422bp
MPLLPFPSIIVGMPTSLLMLLMLSPVPTEGFLTRAPMTLRKIQHTAPSSA
PSCGPAGDCIRRQHVIARLSARPEDEGINNEGSNSGLGAGEHDKEPPNLE
HGVSPMPTGGESEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQW
QLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNIYKGRHECEGDY
DARSVWWREVTLLHAADGGPLEPVVVGERRMEPTSFRGELGAMAADNVFS
CSHVRFKGATEVFEAEIWIRQGDYRTRVTFVYKSPDPAYAFQASKVLVKK
ERLGKEGPTAEEPELFGSSGRGIYDPNARVPGSWVLSLHGGLSLAFPPTL
PRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTFTI
PDDADAGVAKAAASADTNGGEK back to topmRNA from alignment at CM002467.1:457039..460319- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6056 ID=rna6056|Name=rna6056|organism=Nannochloropsis gaditana|type=mRNA|length=3281bp|location=Sequence derived from alignment at CM002467.1:457039..460319- (Nannochloropsis gaditana)
AACTTCGCGGAGACAGCGAATCAGAACACAGCATATAAGCTTTGAAAAAT
TCCATGGCGAAATGGACGTCATCAACAAAATATTTCTCTGCAGTTGACCC
GGTCTCAAGTCAAGAAACCCCTTTTTTTTCCCCACAACACCTACAGGAGT
GCAGCTGACCATGCCATTATTGCCATTTCCCTCAATAATTGTGGGAATGC
CAACATCTCTGCTTATGCTCTTAATGCTATCGCCGGTGCCAACGGAAGGT
TTTTTGACGCGGGCTCCCATGACCTTGCGCAAGATCCAACACACAGCTCC
CTCCTCTGCACCTTCATGTGGGCCGGCTGGGGACTGTATCCGCAGGCAGC
ATGTCATTGCCCGCCTGAGTGCGCGTCCAGAGGATGAAGGAATCAATAAT
GAGGGATCAAACAGCGGACTGGGAGCAGGGGAACACGACAAAGAACCGCC
CAACCTTGAGCACGGCGTATCACCCATGCCGACGGGGGGAGAGTCTGAAT
ACGAGTATCAGTCCGAGTACACCGATCAGCAGGCGGTACGTGTTAGTACA
GGGACATTAACTTCCAATGGTAAAGAATCTATGATGCATGAAGCGTAAGG
GGGGCTAAGTTTTGTTGTTGCCCGATGCCAATCAGTAGGAAAAATATCAA
CAGACCACTAATATTTTTCTCGACAAACTGACTACTATATGTAGGAGATA
GAATACCTCGGCGACGATGAGCTTCTTGCGCGATATCGAGCAGACATGCA
GAATTCTAATGACCAGTGGCAGCTCAATCTCTTTCTGAAGGCGCAGACAG
GGATTTGGTCGGGCGTCTGGAGCGAGTATACCCCCGAACCCAACAGCGGT
CCTAACGGCGAGACTGTCCTCCGTATGACCAACATATACAAGGGGCGACA
CGAGTGTGAAGGTGACTACGATGCCCGGTCGGTCTGGTGGCGAGAAGTGA
CGCTCTTGCACGCGGCAGACGGGGGCCCTCTTGAGCCTGTAGTGGTAGGG
GAGCGGCGCATGGAACCAACGAGCTTCCGGGGGGAGCTGGGCGCCATGGC
TGCAGACAATGTCTTCTCATGCTCTCATGTGCGCTTTAAGGGCGCAACAG
AGGTATTTGAAGCAGAAATATGGATTCGACAAGGGGACTATCGCACCCGA
GTGACGTTCGTTTACAAGAGCCCCGATCCTGCATATGCCTTCCAGGCAAG
CAAAGTGCTTGTCAAGAAGGAGCGCTTGGGGAAAGAAGGTCCCACAGCAG
AAGAGCCAGAGCTCTTTGGGTCGAGCGGACGAGGCATATATGACCCCAAC
GCTAGAGTTCCGGGGTCGTGGGTTTTGTCGCTGCACGGTGGCCTCTCCTT
GGCATTCCCCCCGACCTTGCCTCGCGGACAGAGAGGGGCGGTCATCGTGG
ACTGGACGGCGGGAACTATGCGCTTTCAAGCGGATAGGATATTTGACCGA
CCTGACGGCACTCTAGGCTCCCTGGAAGTCACTCAGATCGGGACCCAGGA
TTCCTTGACGTTCACCATCCCCGACGACGCGGACGCGGGCGTGGCTAAGG
CAGCAGCAAGCGCCGACACGAATGGGGGGGAGAAGTAGTGGACTACAAGG
CATTCTCTAAAAGATGATTGTGGAAGGGTCCAATTTTATTTGTACTATAT
GTCAGGAGAGTACTACTGGTTAAATTTCGTAGGTAAACTAGAGTTTTGAG
CCATCGCTGTTTGTTTGTCTTTGACCCTATTCCTTGCTTTTGGCTTCGTC
AGCGAATGCGGCAAAACATTAGTTCTACAATTATCATTCGGGAGCGTGCG
TGTGCCTGGTACCCTGAGACCAGCCGTCAAGCGCTTGCTGGCTTGACTGG
GACGGCTCGGGCTCGTCGGGCGCTGCCTCGTGGACGCGGACGAGTACCTC
AACGAGCCTCCCGTCCAGGGGGTCCCGGACGAGATCGTAGTCGTCACAGC
TCACCTCTCCCGCTACGTCCCCAACACTGTATTCGTCTACGTCTTCACTA
TCATCCAGCGACGCATCCTCGTCCTCCTCATGCACTTCCGCCTCCACCTG
AATGACGCGCGGCGGACTCCCACTCATTGTTGACGGAAAGGAAGGAAGCT
GGCGATGGGCCCCGGCTTGATCGACCCCTCCGCTTCCGGACGGTGGGATT
CGAGGCAATTGGTACGAAGCTTTAATATCCGAAGTGCCTGCTGTCGGACA
AGGAGAGGGGCTCTGTCCGGAAATACACTCCAAGCTGGTACTGCGATTAG
CAGGGCGATGAACCACGCCGCAAGACTCTTGCGAGTCGCCAAATGATTGG
AGTGACAAAATTTTGGCTGAGGAAGAAGTGCTTATGGAACTCTGCGCTTT
GAACGAAGCGGATATCTCGCGTGAAATGGGTCGATCTCCGAGGCGACTGC
TGCTAGTTCTCTCCAAGGCCAAGAGGCTGATAGTGCGAGAATACTCGACA
GACGCACTGGTGCCCTTCGTTCCTGAGCTGGCTAGATGGGAAGTAGGCTC
TCGCATTTCGGCGGGTGATGTTGGTGTCTCGTTTGGAGACGGTTCGTGTG
CCGGGGCCATGTCGACTTTGAGGTCTGTGGTAGATTTGAATACCTTCCAG
AGCGAAAGACCCTTGCGCCTACTGATCCAGAGTAAATGGCTTAGGCCCAA
CACAGTCATTATGGTCACATTGAAAAGTAGTGCAGTTTCCTCGAAGCGGA
GGTAGGCAAGTCGACCCATGACACCACCAACCAGAAAGCCTAAAATGGCT
GTGGAGTGCAACTTAACCTTCCAGAGGTCACCCCTCCGGCCCTTCAAGAG
GTGGCCGATCGCAATTCCCAAATCTGTAGTCGCACCCGTGACGTGAGTGG
TACGCAGCGTATTACCCGAGTACTTGCTAGTCAGGGAGTTCTGGAGACCC
ATGGCAACAGCGCAGACGTAGATGTAGTAGTGTTGCACGTGTCCCTCGTC
CACGTGAACTTTGTTGACGACAAGAGCCGAGCCTTGCAGAAGGGCGATTG
TGAGAAGCGCTCGCCCATAGGATCGTCCTTAATAAAAGGGATGTGATGGT
TGGCGAGATACAGGTATCAGACAAAGAAGACGCACCACATGCAGATACAA
GATGAGAGGTGGCCTTTCCAAAATCGTACCCGCTTTTTTCCCATTTCTCT
ACGGACGTGTGCACATTTTTTAAAATTTTTGACGTCACAACAACATACCT
AGATAGAATGTCTCATGAGAGACGGTATATCCTCCAACGACAGACCCCAC
CAAGAAGCAAAGAAAAACAGAAATTGGGAGA back to topCoding sequence (CDS) from alignment at CM002467.1:457039..460319- >rna6056 ID=rna6056|Name=rna6056|organism=Nannochloropsis gaditana|type=CDS|length=2538bp|location=Sequence derived from alignment at CM002467.1:457039..460319- (Nannochloropsis gaditana)
GAGATAGAATACCTCGGCGACGATGAGCTTCTTGCGCGATATCGAGCAGA
CATGCAGAATTCTAATGACCAGTGGCAGCTCAATCTCTTTCTGAAGGCGC
AGACAGGGATTTGGTCGGGCGTCTGGAGCGAGTATACCCCCGAACCCAAC
AGCGGTCCTAACGGCGAGACTGTCCTCCGTATGACCAACATATACAAGGG
GCGACACGAGTGTGAAGGTGACTACGATGCCCGGTCGGTCTGGTGGCGAG
AAGTGACGCTCTTGCACGCGGCAGACGGGGGCCCTCTTGAGCCTGTAGTG
GTAGGGGAGCGGCGCATGGAACCAACGAGCTTCCGGGGGGAGCTGGGCGC
CATGGCTGCAGACAATGTCTTCTCATGCTCTCATGTGCGCTTTAAGGGCG
CAACAGAGGTATTTGAAGCAGAAATATGGATTCGACAAGGGGACTATCGC
ACCCGAGTGACGTTCGTTTACAAGAGCCCCGATCCTGCATATGCCTTCCA
GGCAAGCAAAGTGCTTGTCAAGAAGGAGCGCTTGGGGAAAGAAGGTCCCA
CAGCAGAAGAGCCAGAGCTCTTTGGGTCGAGCGGACGAGGCATATATGAC
CCCAACGCTAGAGTTCCGGGGTCGTGGGTTTTGTCGCTGCACGGTGGCCT
CTCCTTGGCATTCCCCCCGACCTTGCCTCGCGGACAGAGAGGGGCGGTCA
TCGTGGACTGGACGGCGGGAACTATGCGCTTTCAAGCGGATAGGATATTT
GACCGACCTGACGGCACTCTAGGCTCCCTGGAAGTCACTCAGATCGGGAC
CCAGGATTCCTTGACGTTCACCATCCCCGACGACGCGGACGCGGGCGTGG
CTAAGGCAGCAGCAAGCGCCGACACGAATGGGGGGGAGAAGTAGATGCCA
TTATTGCCATTTCCCTCAATAATTGTGGGAATGCCAACATCTCTGCTTAT
GCTCTTAATGCTATCGCCGGTGCCAACGGAAGGTTTTTTGACGCGGGCTC
CCATGACCTTGCGCAAGATCCAACACACAGCTCCCTCCTCTGCACCTTCA
TGTGGGCCGGCTGGGGACTGTATCCGCAGGCAGCATGTCATTGCCCGCCT
GAGTGCGCGTCCAGAGGATGAAGGAATCAATAATGAGGGATCAAACAGCG
GACTGGGAGCAGGGGAACACGACAAAGAACCGCCCAACCTTGAGCACGGC
GTATCACCCATGCCGACGGGGGGAGAGTCTGAATACGAGTATCAGTCCGA
GTACACCGATCAGCAGGCGGAGATAGAATACCTCGGCGACGATGAGCTTC
TTGCGCGATATCGAGCAGACATGCAGAATTCTAATGACCAGTGGCAGCTC
AATCTCTTTCTGAAGGCGCAGACAGGGATTTGGTCGGGCGTCTGGAGCGA
GTATACCCCCGAACCCAACAGCGGTCCTAACGGCGAGACTGTCCTCCGTA
TGACCAACATATACAAGGGGCGACACGAGTGTGAAGGTGACTACGATGCC
CGGTCGGTCTGGTGGCGAGAAGTGACGCTCTTGCACGCGGCAGACGGGGG
CCCTCTTGAGCCTGTAGTGGTAGGGGAGCGGCGCATGGAACCAACGAGCT
TCCGGGGGGAGCTGGGCGCCATGGCTGCAGACAATGTCTTCTCATGCTCT
CATGTGCGCTTTAAGGGCGCAACAGAGGTATTTGAAGCAGAAATATGGAT
TCGACAAGGGGACTATCGCACCCGAGTGACGTTCGTTTACAAGAGCCCCG
ATCCTGCATATGCCTTCCAGGCAAGCAAAGTGCTTGTCAAGAAGGAGCGC
TTGGGGAAAGAAGGTCCCACAGCAGAAGAGCCAGAGCTCTTTGGGTCGAG
CGGACGAGGCATATATGACCCCAACGCTAGAGTTCCGGGGTCGTGGGTTT
TGTCGCTGCACGGTGGCCTCTCCTTGGCATTCCCCCCGACCTTGCCTCGC
GGACAGAGAGGGGCGGTCATCGTGGACTGGACGGCGGGAACTATGCGCTT
TCAAGCGGATAGGATATTTGACCGACCTGACGGCACTCTAGGCTCCCTGG
AAGTCACTCAGATCGGGACCCAGGATTCCTTGACGTTCACCATCCCCGAC
GACGCGGACGCGGGCGTGGCTAAGGCAGCAGCAAGCGCCGACACGAATGG
GGGGGAGAAGTAGATGCCATTATTGCCATTTCCCTCAATAATTGTGGGAA
TGCCAACATCTCTGCTTATGCTCTTAATGCTATCGCCGGTGCCAACGGAA
GGTTTTTTGACGCGGGCTCCCATGACCTTGCGCAAGATCCAACACACAGC
TCCCTCCTCTGCACCTTCATGTGGGCCGGCTGGGGACTGTATCCGCAGGC
AGCATGTCATTGCCCGCCTGAGTGCGCGTCCAGAGGATGAAGGAATCAAT
AATGAGGGATCAAACAGCGGACTGGGAGCAGGGGAACACGACAAAGAACC
GCCCAACCTTGAGCACGGCGTATCACCCATGCCGACGGGGGGAGAGTCTG
AATACGAGTATCAGTCCGAGTACACCGATCAGCAGGCG back to top
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