EWM24633.1, cds6041 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24633.1 vs. NCBI_GenBank
Match: gi|585106153|gb|EWM24633.1| (hypothetical protein Naga_100117g17 [Nannochloropsis gaditana]) HSP 1 Score: 871.307 bits (2250), Expect = 0.000e+0 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0 Query: 1 MPLLPFPSIIVGMPTSLLMLLMLSPVPTEGFLTRAPMTLRKIQHTAPSSAPSCGPAGDCIRRQHVIARLSARPEDEGINNEGSNSGLGAGEHDKEPPNLEHGVSPMPTGGESEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNIYKGRHECEGDYDARSVWWREVTLLHAADGGPLEPVVVGERRMEPTSFRGELGAMAADNVFSCSHVRFKGATEVFEAEIWIRQGDYRTRVTFVYKSPDPAYAFQASKVLVKKERLGKEGPTAEEPELFGSSGRGIYDPNARVPGSWVLSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTFTIPDDADAGVAKAAASADTNGGEK 422 MPLLPFPSIIVGMPTSLLMLLMLSPVPTEGFLTRAPMTLRKIQHTAPSSAPSCGPAGDCIRRQHVIARLSARPEDEGINNEGSNSGLGAGEHDKEPPNLEHGVSPMPTGGESEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNIYKGRHECEGDYDARSVWWREVTLLHAADGGPLEPVVVGERRMEPTSFRGELGAMAADNVFSCSHVRFKGATEVFEAEIWIRQGDYRTRVTFVYKSPDPAYAFQASKVLVKKERLGKEGPTAEEPELFGSSGRGIYDPNARVPGSWVLSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTFTIPDDADAGVAKAAASADTNGGEK Sbjct: 1 MPLLPFPSIIVGMPTSLLMLLMLSPVPTEGFLTRAPMTLRKIQHTAPSSAPSCGPAGDCIRRQHVIARLSARPEDEGINNEGSNSGLGAGEHDKEPPNLEHGVSPMPTGGESEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNIYKGRHECEGDYDARSVWWREVTLLHAADGGPLEPVVVGERRMEPTSFRGELGAMAADNVFSCSHVRFKGATEVFEAEIWIRQGDYRTRVTFVYKSPDPAYAFQASKVLVKKERLGKEGPTAEEPELFGSSGRGIYDPNARVPGSWVLSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTFTIPDDADAGVAKAAASADTNGGEK 422
BLAST of EWM24633.1 vs. NCBI_GenBank
Match: gi|299116625|emb|CBN76250.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.865 bits (307), Expect = 4.200e-27 Identity = 109/330 (33.03%), Postives = 152/330 (46.06%), Query Frame = 0 Query: 112 SEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEP-NSGPNGET-VLRMTNIYKGRHECEGDYDARSVWWR-EVTLLH-----AADGGPLEPVVVGERRMEPT---------SFRGELGAMAADNVFSCSHVRF--KGATEVFEAEIWIRQGDYRTRVTFVYK----------------SPDPAYAFQAS----KVLVKKERLGKEGP--TAEEPELFGSSGRGIYDPNA--RVPGSWVLSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTF 398 SEY Y+ E+ Q E D+E LAR+R + +ND+WQ + G W G W EY E ++G + E+ + M I G+ R V E T + A GG + V E P SFRG G N ++ + G + E+ +R D R R F Y P+ A A S +V V +E L + P +EPEL+GS+G+G+YDP + R P + + GGL++ FP + GQ G VDWTAG+ R+QADR+FD DG+L LEVT+IGTQD+ F Sbjct: 141 SEYGYEPEFELQGEEPN--ADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGSWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVAAGGADGPWIEVGLRVQDVRMRCVFEYGPGAGGSVDAEGGGGVPVPEAAAAAAGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVF 468
BLAST of EWM24633.1 vs. NCBI_GenBank
Match: gi|922855773|gb|KOO24191.1| (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 91.6633 bits (226), Expect = 1.309e-16 Identity = 90/307 (29.32%), Postives = 140/307 (45.60%), Query Frame = 0 Query: 104 SPMPTGGESEYEYQSEYTDQQAEIEY-LGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNIYKGRHECEGDYDARSVWWREVTLLHAADGGPLEPVVVGERRMEPTSFRGELGAMAADNVFSCSHVRFKGATEVFEAEIWIRQGDY------RTRVTFVYKSPD-PAYAFQ----ASKVLVKKERLGKE--GPTAEEPELFGSSGRGIYDPNARVPGSWV-LSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDS 395 SP + ++E + + + Q IE + D+ LL +YR + N +WQLN F ++Q G W+G Y + ++G L+ T CE A + +L AA LE + +FR E+G MA + FS S E A + R R +Y + A A + A +V++ R G + A +L G+ GRG+YDP ++ L L GG++LAFP ++ G G + +DW AG+MR+Q DR + DG+L SLE+T+I D+ Sbjct: 116 SPKISRMDTEEQRKDDSAFQSDTIEEDIEDEALLEQYRQKRWDDNARWQLNTFAQSQLGKWAGHMELYLAD-DAGRMLPKELKSTAC-----SCEARVCASNTIGLTESLPEAAAQLTLEA------ELGLAAFRPEVGNMAVASAFSVSRRGADVGGESARAGEPLLLELALGEAERRVRCKLLYVADRGEAAAVRPYSIAQLAIVREVRGGGQFIDGNAGSADLDGTPGRGLYDPPPGDKSGYISLYLEGGMTLAFPTSVAAGAAGVISLDWIAGSMRYQIDRKWKVFDGSLSSLELTEIRKDDA 410
BLAST of EWM24633.1 vs. NCBI_GenBank
Match: gi|873240218|emb|CEL93669.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 67.0106 bits (162), Expect = 1.766e-8 Identity = 88/341 (25.81%), Postives = 130/341 (38.12%), Query Frame = 0 Query: 123 QQAEIEY--LGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEY------------TPEPNSGPNGETVLRMTNIYKGRHECEGDYDARSVWWREVTLLHA----ADGG---------PLEPVVVGERRMEPTSFRGELGAMAADNVF-------------------------SCSHVRFKGATEVFEAEIWIRQGDYRTRVTFVYKS----PD----------PAYAFQASKVLVKKERLGKEGPTAEEPELFGSSGRGIYD-PNARVPGSWV-LSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDS 395 QQ EY L DDE L R RA ND WQ N ++ G W GV Y T +S P + + N + +R + + + DGG PL VV P FR + G N F S + + ++ E+ I+ R R F ++ PD P + ++ V +ERLG E P A E +G G G+YD P R+ ++ L +G L+L+FP ++ G+ GA+ +DWT R+QADR F +L + E T+I +D+ Sbjct: 60 QQYGDEYDGLDDDEYLRR-RARELADNDAWQFNKMVE-HVGTWYGVAQIYQIAKAKQGEEGTTAAASSSPLPAPFIILKNETASIETTIAVKSDPKLGYRLLRITSSQVPVKDGGGAGSARQGYPLPMEVV----YYPHDFRAKQGNQIVGNAFTLAGFPSPSWVPAPQSASVPLAPILSSADDKINSQDDIIWTEVGIKSEGRRVRGVFGFQRESTPPDTDAETETGTPPRKVWTLRQLAVIRERLG-EPPLANEDAFYGEWGHGLYDKPAERIGQNYFELFFNGHLTLSFPLSIGEGEAGALSLDWTPDMRRYQADRKFRTYGPSLRTFETTEILARDA 393
BLAST of EWM24633.1 vs. NCBI_GenBank
Match: gi|676396249|ref|XP_009041402.1| (hypothetical protein AURANDRAFT_72648 [Aureococcus anophagefferens] >gi|323447945|gb|EGB03850.1| hypothetical protein AURANDRAFT_72648 [Aureococcus anophagefferens]) HSP 1 Score: 64.3142 bits (155), Expect = 2.180e-7 Identity = 83/303 (27.39%), Postives = 115/303 (37.95%), Query Frame = 0 Query: 134 ELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNSGPNGETVLRMTNI-YKGRHECEGDYDARSVWWRE-----VTLLHAADGGPLEPVV-----VGERRMEPTSFR------GELGAMAADNVFSCSHVRFKGATEVFEAEIWIRQGDYRTRVTFVY-KSPDPAYAFQASKVLVKKERLGKEGPTAEEPELFGSSGR-GIYDPNARV------------PGSWVLSLHGGLSLAFPPTLPRGQRG-------AVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTF 398 E LA R + S D WQ + F KA G W G Y + T ++ + +DA ++ E V L DG +G ++P +FR GELG AA N + S R G + ++W R D + Y K+ A+AF L + P G + G+YD + R+ G L L G ++ AFP TL G+ G V +D AG MR Q DR+FD P G L S E+T I D+ F Sbjct: 205 EALAERRRVNRRSQDCWQFDQFTKAFAGSWRGAGERYVAAGRALAVAATFDAKLDLERRDDATVASAHDAWALAVSEQRTNFVVLDSLGDGAAEPAREAAAPPLGAVTLKPATFRAEARDGGELGGTAA-NGEAFSTARVDG--DALVVDVWARAADDALSLRVAYEKTTGGAWAFACCD-------LARWCPAGGAAAPAGDALGTGLYDVHRRLRDMATRGALDESVGIHELRLPGRVTAAFPRTLDPGRGGLNANGGGVVSLDLVAGDMRIQVDRVFDTPLGDLASFEITDILVDDAEKF 497 The following BLAST results are available for this feature:
BLAST of EWM24633.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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