rna6043, rna6043 (mRNA) Nannochloropsis gaditana

Overview
Namerna6043
Unique Namerna6043
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1698
Alignment locationCM002467.1:434539..434946 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100055g11.7335.mrna
Orig protein idgnl|cribi|Naga_100055g11.7335
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:434539..434946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100055g11gene5838Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6043rna6043-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24651.1cds6028Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6043 ID=rna6043|Name=rna6043|organism=Nannochloropsis gaditana|type=mRNA|length=1698bp
ATGCGACGCATATTAGTCAGTCTCCTGCTCGCACGCGAGGTGATGGGTTT
TCTGCCCCCATGCCTCCCTCATCAGGAAGCAGCACACGTCCCTGTCACCA
TGTCTCCACGCGGTACCTCATCACCATCTGCGTTGGCAGCCTGGAGCGGC
GGCGGAGGAGAATACGACTTACTCAAAGGCAATAATAACGTGGATAGGAC
CAGCGATGGTAATCTACCTGAGTTCGATTTGCTCGGTGGGAAAGCACAGA
AAGAAGCGTCCGTGATAAGGGAGGACCCTCATGACACTTTGCTGGCGGAG
CTTATCTTCACAACGGAGGATGTACGGGAAGTGATATACAAACGTTTGGA
GGACTGTAATTCGGGTTTTGCTGATTTCTTAGAAGGTCGCATCAGCATGG
CGACAGATTTGGAAGAACGGCAGGCGTTGCGCTCATTGGTGGAGATGATT
GAGGCGGTTAAGAAAGCCGTTGAGCGCAAAAAAGTGGAGGATACCGTGCG
GATCAGGGAAGAGCAGCTACGGCAGTTGGAAGAGGAGGCCCGCCTGGCAG
CCGAAAGGGCTGAGGCAAGGAAGCGCCCGACTTGGCAGGAGGGGGAGGTC
AAAGATTCGAGTGAGCGGGAGGAATATGCGCAGAGCATGGGCACAGACGT
TGCCCCGTCAGTGAGAGAAGATGTGGAGGCATCGGCGCTGGCCATGGACC
CGAAGCAGAGCTATGAGCAGCTGCTGGAGGCTTTTCTTGGTCTGGACTTT
GGCAAGGAGGAGTACGTGCGAGAAGTGGTGGAGGCGAACTACGAGCGGTG
CACCATGGAGTTCTTGGACCTATTGGGAGAGCGTTTGAAAGATGACTCCA
CGCCGCCCGGAGTGCAATCGCGTCTAATGGCCCTGAAGGGGCACATCGAA
GACATACTGCGGGCGAGGATGTCGCGAGCCGCTGAGCGCCTCCAGTCCAT
TGTCAAGGCGGGCGCCTTGGACGAAATGGTGGATCAGGTCTACGAGTTGA
ATCAAAGGAACGAAGTCGATGAGCCCCTGATCTTGCTTTTGGAAACAAAT
GTCCAGCAGGCAGAGCGCGCCGGTGCAGCGCCGGCTGCAGAGCTTTTTCG
CAAGCTCCTAGCCACGGCCAGAGAGGCAATCGATGAGAAGCTGAGCATGT
CCACTCGCCTTGTCCGGCGACTTCTACGAGTGGCTGACCCAGAAAAGCGG
AAAGAGATCCTCCACGACGCCTTCCGACCCAAGGCCTCCGCCCTAACTGC
GGAGGGGGCTAAGACGGGGGCTATGCCGGATGTGCCTCCGCCCGACTTCA
TAGAAGAATTGCGGCAACTGATTAAAAACTTTGGCAACATCGAGACCGAC
AATTTTGCAGAGAAATTGCGCACCTTGGTCGAAGAAGCAGAGGAGGTCTC
CACGACCATCTACGGAAAAGCGATGTCTCACCGCGAGCAGCAGGACTATA
TGTGGCAGAAGGGCTCGATTTCGGTCTTCGATTTGGAAGCTCTGGAGGGA
AAGGCTCAGGCCGTTGGTGACCAAATGCCTTGGCAGAACGACGCGTACGA
TAATATGATGCCCCCAGGTTTTGAAGATGGTGTTCGTACCATCGGTGGAA
ACGATAAGAGTAGTAAAATGAGGAAGGGATGTCGTGACGTGGAAGCCTGT
TGCCCTGAAGGACAAGCATTCTCACTTGAAAAAGAAAATTATTCATAA
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protein sequence of rna6043

>rna6043-protein ID=rna6043-protein|Name=rna6043|organism=Nannochloropsis gaditana|type=polypeptide|length=75bp
MALGASMPQSLYLQRAPFSDTTHRKLGSSQVCGAGDMPSYVCIGPTAQDL
SSCTQHCDRSVMVFAVMSYLLQQRM
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mRNA from alignment at CM002467.1:434539..434946-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6043 ID=rna6043|Name=rna6043|organism=Nannochloropsis gaditana|type=mRNA|length=408bp|location=Sequence derived from alignment at CM002467.1:434539..434946- (Nannochloropsis gaditana)
ATGGCCCTTGGCGCCTCTATGCCTCAATCGTCCCTGCTGCTGTTCAATTA
ATTTTCCGTGAGCTGCAACTTTTACATTTTTTAAGAGAGAACTGGACAGC
AACGCCCCTCGCAATAGAAAGCAGGCGCCCTCGCGAGGGTGCGGGGCAGG
TGGCGAAAGGCGGCGAGCTCTTCGTCTCGTTGGAGGGCCGGCGTGATCGA
AGCTATCAGGTTGTATTTGCAGAGAGCACCCTTTTCCGATACTACTCACC
GGAAGCTCGGGAGCAGTCAAGTCTGCGGCGCAGGAGACATGCCGTCTTAT
GTCTGTATTGGTCCCACGGCCCAGGACTTGTCTAGTTGCACACAGCATTG
CGATCGGTCTGTCATGGTCTTCGCCGTGATGAGTTATTTATTACAGCAAC
GCATGTGA
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Coding sequence (CDS) from alignment at CM002467.1:434539..434946-

>rna6043 ID=rna6043|Name=rna6043|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at CM002467.1:434539..434946- (Nannochloropsis gaditana)
GTTGTATTTGCAGAGAGCACCCTTTTCCGATACTACTCACCGGAAGCTCG
GGAGCAGTCAAGTCTGCGGCGCAGGAGACATGCCGTCTTATGTCTGTATT
GGTCCCACGGCCCAGGACTTGTCTAGTTGCACACAGCATTGCGATCGGTC
TGTCATGGTCTTCGCCGTGATGAGTTATTTATTACAGCAACGCATGTGAA
TGGCCCTTGGCGCCTCTATGCCTCAATCGTTGTATTTGCAGAGAGCACCC
TTTTCCGATACTACTCACCGGAAGCTCGGGAGCAGTCAAGTCTGCGGCGC
AGGAGACATGCCGTCTTATGTCTGTATTGGTCCCACGGCCCAGGACTTGT
CTAGTTGCACACAGCATTGCGATCGGTCTGTCATGGTCTTCGCCGTGATG
AGTTATTTATTACAGCAACGCATGTGAATGGCCCTTGGCGCCTCTATGCC
TCAATC
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Synonyms
Publications