EWM24651.1, cds6028 (CDS) Nannochloropsis gaditana

Overview
NameEWM24651.1
Unique Namecds6028
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:434918..434946 -
Alignment locationCM002467.1:434539..434737 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24651.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100055g11.7335.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:434918..434946 -
CM002467.1supercontigCM002467.1:434539..434737 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24651.1 vs. NCBI_GenBank
Match: gi|585106173|gb|EWM24651.1| (hypothetical protein Naga_100055g11 [Nannochloropsis gaditana])

HSP 1 Score: 154.836 bits (390), Expect = 7.588e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MALGASMPQSLYLQRAPFSDTTHRKLGSSQVCGAGDMPSYVCIGPTAQDLSSCTQHCDRSVMVFAVMSYLLQQRM 75
            MALGASMPQSLYLQRAPFSDTTHRKLGSSQVCGAGDMPSYVCIGPTAQDLSSCTQHCDRSVMVFAVMSYLLQQRM
Sbjct:    1 MALGASMPQSLYLQRAPFSDTTHRKLGSSQVCGAGDMPSYVCIGPTAQDLSSCTQHCDRSVMVFAVMSYLLQQRM 75
The following BLAST results are available for this feature:
BLAST of EWM24651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106173|gb|EWM24651.1|7.588e-48100.00hypothetical protein Naga_100055g11 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6043rna6043Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications