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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF3172 |
| Orig transcript id | gnl|cribi|Naga_100055g22.7351.mrna |
| Orig protein id | gnl|cribi|Naga_100055g22.7351 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:418504..419761 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6032 ID=rna6032|Name=rna6032|organism=Nannochloropsis gaditana|type=mRNA|length=3687bp
TTATAATAAGTTTAGTTTGAAAAAGAAGCATTTCGTCCCCCGCAACTCGT
CAATCATTTTTAGAAGCAAGGAGTACATGGCAAATCGTCGACGGTCTTCA
GTGTCCTTCCAACTGCGGGACGTACACTTTGCCGCGCATCTACCCTCCAA
TGGAACACATCGAGACTCAGATATTGGAATTACCTCATCCTTTGTCCGCG
CGGCCTTGCCGCTTCCTCTACTAGCTTTTGGATTGGGCATGGCGGCTATG
GGTGGATGGATTTGGGTAACACCTGCCTTAGTGTTTGCAGGGCTTGAGCT
GTACAGGGGCGCCTCAGGTCATACTAGACGACTTAGTGCCTCCGACAGGG
CGCGCCGGGCATCTTCAGGTGCCAATGCCGACATCACGGGCCGTGTAAGG
GGAAAGACATTATCTCTGAAGTTTTGCTGTATCTGTCTTGACACAATTCC
GGACGACGAGCCCTGCTTTAACCTATTCGACTGTAAACATGATACCCAAA
CTCATAAAGTGTGCATTGATAAATGGCTGGAGAAGCATGAGACTTGTCCC
TTGTGCCGACGAGACGCGAAAGACCCGGTGATTGGGGAAATGAAGAAGTA
TCCTCACAACGTTGCTGCTCAAATTCGTGGTTGTCGATTTATCGTCTTTA
AAGGCTGGCAGAATGCAGAATTTCATAGGCATTTGATAGAAATTGGGGCA
GCTGAGCTCGTAGCGAATGCTCTTGACATTCATTCCTCAGATCCCAGCGT
GCTCGCCGCTTGTTGTGCTGCAATATTCGTTCTGGCTTTCTCCGATAGAG
AAACACAAGAGCGTCTGTCGTCTTTTGGCGTATGCCAAAGGATCGTGGAG
GGAATGTTAACATTCAGCGAGGATATTGAAGTGCAGACTCGCGGATGTGG
TGCGATATACTCGTTGTCTCTTTCAAATAAACAGATACAGAGGCAGCTTT
GTCTTGCCAAGGCGCCAGCAGCTGTGCTGAATGCGTTGCAACGGTTTATG
GGACAGGCGTCAGTTGCTATGAGTGCGGCAGACGCTATTATGTCTTTGTC
TTGCGATAACAAGCTCGGTCAGGACCTGCTAGGCATTGGCGAGGGAGCTG
AGGTTCAGCGGGGGGGAAAGGGTGCGTGTGAGCTACTTGCTGAAGTGATA
GATCGTTACTCGCAAGATCGTGACGTTATATATGCGGCTCTGGATGCTGT
CATGAAAATGGCTATCGACAATCCAGAAAATAGATTGCGATTTGGTGGTG
TTGGCATGTGCAGTAAAGTCATGGATGCGTTTAATCAGTACCAAGATGAC
GAAGTATTCTTACTGGTCGCTCTTACGGCTGTATATACCATGGCCGAGAA
CCAAAGAGAAAATCAAACCCGGCTCTTGGAAGGAAATAAAGCCGAGATCT
TGATGTCGACTTTGTGGCGCCACGAGGGGTTTATGGATGTTGTATCCGTG
GGACTTGATGTCATATTTGCGCTCACGTACGATCCTATCGAGGGTCTTAA
CACAAGAAGCCACCCTGCGCTACGAAACGCGGGAGCGTGTGGCTTCATTT
TAAAAATGCTACAAACTTACCCACGTAACCCTGAGATTTACGGACCAGGT
CTAAAAGCCATGGCGTGTTTTCTCACATCCAATGAGATGGATTCCTCAAT
TACAGGACCCGATTGGTGTCAGGTAGTCTGCAACAGTATGAAGCAGAGTT
TGGAGTTGGAAGATGTACCAGTTCTTGAAATTTGCTGTCGAGTACTAGGG
CAGTTAGCGATTCATGAGAAGGATAATCAGGCCCTGCTACGCCGGAATGG
AGCATGCGAGATGATATGCGACTGCTTGCGAAAAGGATTCAGCAAATGGG
AGGCGCTGCAAGCGACAGCTGATCTAGCGTATGATTGTCAAGAAAACCGC
CATGAGCTTGGTCAGCGAGATTGTGTCGCTCTTCTTATTAAGTGTATTGA
AAAGGATCCGGAGGACTGGGTGGCACTAGACATCGCCTTAATGGCGCTCT
CAAATCTTGTCCAGGATCATGAACAAAATGCTTCCTGTGCAGGAGCTCAA
ATGATTCATCTTTCAACAGACAAAGATTGCACTGTCTCCTTCTATGCATT
CTTATCTCATCTGCTCGAATCGGATCGATTAGTATTCGGAGAGCGAGCAT
GCATTATCATGATGGTCCTTTCTGTCTTATGTGCGAATGATCCAGCAGCT
CAGTCGAAGATTGGAGGTGTTAATGGTTGTTGGGTTGTCGTGCAGAGGCT
TCGAATATCAGGGATAGGACCTGCGGGTGACTCAATGGGGCGTGAAGATC
AACCACTAAGGTATCCTGACATGTCTTTACTACGTCAAGGAGTCCAATTG
ATGTCAGATCTTGCTACGGCTCATTCAGATAATCAGAAGAGGCTTCAGCA
GGCAGATGGACTTAATTTGTTGTTGCAAGTGCTTCCTGACTTCTCCAGCG
ATTCTTCTGACGTGGTACAATGGCTTGTGGCTGTTACTGCCCTTCTTGAA
GGCAATCCTAATAATCAACGTCATGCTGGGAACCTCAAAATGTGTGGACA
TACTGTCAAACTATTAAAAGGCTTCTCTAATGACACTGCTGTAGTGGAGT
CAACTTTGCGCTGCTTGATAGCTCTTGCGACGAATTATCGAGAAAACCAG
GAAAAGATTGGATCTCTGGGCGGGTGCGATCTGGTTCGTCAAGTAGTGTC
CGAATTCAGCGAGGATAGTCATTTGGTAGTACGGAGCTGCTCTCTAATTT
TGGCACTTTGTGAGCTACAGAAAACTGATTCAAGCGGTCGCCCTCTGCAT
ATTTGGAAGGATAACTCATACAACAACAAACATCGCTTCAGAAAAGGAGG
AATGGTTCCGATTCTAATGCAAGCCTTCATTAATCATATCAATCGGAAAT
CAGAATCAGTGCTATTTGGAAACTTGATTTTAAGCCTTGCTCTGCTTGCA
GAGGACGATCCCATTACTAGTGCGCAACTGCGTGACAATAGCATCTTGAA
TCTGACAATCAGGCTTGTACTTACATATCCTGAGGAAGAAATGCTTTTCA
TGGCAGCTGGTGGACTTATCGCATCTTCTTGTGTCGTTTTCAATGACAAA
TGGACAGATTGGATCATGTTCGAAACGCCTTTGGTCGAAAATCAAGACCT
TTTCATTAATGGAAATGTATTCCCATATATAATCGGCTTCATAACAGGCG
CACCTAGAATGAAATCCTCGGTCATCATGAGTTTTGTTTCATTGGCTGCA
TTGGCCTGGCAAAATGAGAAAGGAATTTTGTTGCTTCGAGACTCGATCGG
CGTTCTCACTGAAATCTTGTCGAGTGATGTAGTACATGAAGCTGAGTGTA
TGTTCTATGGACTTCTAGTTCTTGGTTCAATGATCAGTTTGCCAAAACCG
GACGAAAAAATTATGGATATTTGTGCTTCATTGATCTTTGAATTGATTGA
GAGGGCACATAAGCTATTTCCAGATAATTTATGCATTAGAAAAATATGCA
GACTTCTTTTTTCGCATATACAGAGATGTGGGCGACGTGCTAGATATCTG
ACTGCTGCATGATAATTTATGTTGCATAAATGAGAAAGTTTAAAAAGCAG
ACTGATATCATTTTCAGCTTATGTGACAGCGCACCAATTTCTTAAGACAT
TGTAGACCAAATATCAGGTAAAGCCGGTGTACTGTTC back to topprotein sequence of rna6032 >rna6032-protein ID=rna6032-protein|Name=rna6032|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MRLCRGFLYPRLFNACQVRRVYSGAPLPICNMDPRSGRRAKISMQSMYDK
EGNRRRRVRSRVNRKGEDADEEGDDEEEEYRAMRPPALDRVRPPPFSRGR
PEVGKNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLA
SRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCV
LRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSD
DAQNEFLEKNPKLGVGEDVYDK back to topmRNA from alignment at CM002467.1:418504..419761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6032 ID=rna6032|Name=rna6032|organism=Nannochloropsis gaditana|type=mRNA|length=1258bp|location=Sequence derived from alignment at CM002467.1:418504..419761- (Nannochloropsis gaditana)
ATGCGGCTCTGTCGAGGTTTCTTGTATCCTCGACTTTTTAACGCCTGCCA
AGTAAGGCGTGTGTATTCTGGTGCTCCATTACCAATATGTAATATGGATC
CAAGGAGTGGAAGACGCGCCAAAATATCTATGCAGAGTATGTATGACAAG
GAAGGCAATCGGCGCCGCCGAGTACGCAGTCGAGTAAATCGGAAGGGCGA
GGATGCGGACGAGGAAGGCGATGATGAAGAAGAGGAATATCGAGCAATGC
GTCCCCCGGCTCTAGACAGAGTCCGCCCTCCTCCTTTCTCAAGAGGCCGT
CCAGGTAAGTGTGCGGAAATTAATGCTGAAAATACGGTAAATGACAATTT
GTAGACAAAAACAGTAGTATGGTACACGGTAGTGACGCTCAGTACATGTA
CTGGCCTCGACTCACGTGTATCATAAAACAAATTGTGGGAGACAGAAGTC
GGGAAGAACAGATTACCATTCGGAATATCATGGATACCGCAGGGTCTGAG
CGCTGCGCTGCTCTTGGGTACATTTGTGTTGGGTGTTGGCACCGGTGTTA
CTGTCGATTCTGCAGTTAACACAAACAAGAAAGACCTTGCGTCTCGCGAT
GCCATCGATAAGAACGCTCCCAACCCTAAGTTTTGCCAGGTCCGGTAAAA
GAGATGGGTGAAACTAGGCCAGAAGTAAACAGAGGACGTGCCTCCGGGTG
TCGAAGACTGCATCCATCCACATGACTCATGACCTTCATCCTCTCGTCTT
CCTTCTTATTACAGCGCTACGGTGCCAGTACATTGGTTCTTGACAACCGA
ATATTTGTGTCGTTTAATCCTTTCGATGTGTATGTGACGCAGGCGGATGT
GAAGCCTGGTTGCGTTTTGCGTGCTGCCAATGTAGTCCAGGCCCTGCAAG
GCAGGGGATTGCTAACGGACGAGGAGGTGAGAGTTGCAGTGGGGCGGCAG
AGATACTCATGATTAATGTGGAGGATGATAATCGAATTTGCTTTGAGAAC
GCCGAGAGAAGCACTGTCATGGAGAACATCTTACATGCATGCATATCGTA
AAGAACTGGAATTGCTATACTCTGATTTCAATAATTCCTCTCATAACAGG
TCAATGTGTGTAAAAATGGCAACAACACGTGGGCATACGTAGGCGATATA
AACGACAAACCACAGCTTTCTTGTGTGTATCAATCTGACGACGCGCAAAA
TGAGTTTCTGGAGAAGAATCCGAAGCTGGGTGTGGGAGAAGACGTGTATG
ACAAGTAA back to topCoding sequence (CDS) from alignment at CM002467.1:418504..419761- >rna6032 ID=rna6032|Name=rna6032|organism=Nannochloropsis gaditana|type=CDS|length=3276bp|location=Sequence derived from alignment at CM002467.1:418504..419761- (Nannochloropsis gaditana)
GTCAATGTGTGTAAAAATGGCAACAACACGTGGGCATACGTAGGCGATAT
AAACGACAAACCACAGCTTTCTTGTGTGTATCAATCTGACGACGCGCAAA
ATGAGTTTCTGGAGAAGAATCCGAAGCTGGGTGTGGGAGAAGACGTGTAT
GACAAGTAACGCTACGGTGCCAGTACATTGGTTCTTGACAACCGAATATT
TGTGTCGTTTAATCCTTTCGATGTGTATGTGACGCAGGCGGATGTGAAGC
CTGGTTGCGTTTTGCGTGCTGCCAATGTAGTCCAGGCCCTGCAAGGCAGG
GGATTGCTAACGGACGAGGAGAAGTCGGGAAGAACAGATTACCATTCGGA
ATATCATGGATACCGCAGGGTCTGAGCGCTGCGCTGCTCTTGGGTACATT
TGTGTTGGGTGTTGGCACCGGTGTTACTGTCGATTCTGCAGTTAACACAA
ACAAGAAAGACCTTGCGTCTCGCGATGCCATCGATAAGAACGCTCCCAAC
CCTAAGTTTTGCCAGATGCGGCTCTGTCGAGGTTTCTTGTATCCTCGACT
TTTTAACGCCTGCCAAGTAAGGCGTGTGTATTCTGGTGCTCCATTACCAA
TATGTAATATGGATCCAAGGAGTGGAAGACGCGCCAAAATATCTATGCAG
AGTATGTATGACAAGGAAGGCAATCGGCGCCGCCGAGTACGCAGTCGAGT
AAATCGGAAGGGCGAGGATGCGGACGAGGAAGGCGATGATGAAGAAGAGG
AATATCGAGCAATGCGTCCCCCGGCTCTAGACAGAGTCCGCCCTCCTCCT
TTCTCAAGAGGCCGTCCAGGTCAATGTGTGTAAAAATGGCAACAACACGT
GGGCATACGTAGGCGATATAAACGACAAACCACAGCTTTCTTGTGTGTAT
CAATCTGACGACGCGCAAAATGAGTTTCTGGAGAAGAATCCGAAGCTGGG
TGTGGGAGAAGACGTGTATGACAAGTAACGCTACGGTGCCAGTACATTGG
TTCTTGACAACCGAATATTTGTGTCGTTTAATCCTTTCGATGTGTATGTG
ACGCAGGCGGATGTGAAGCCTGGTTGCGTTTTGCGTGCTGCCAATGTAGT
CCAGGCCCTGCAAGGCAGGGGATTGCTAACGGACGAGGAGAAGTCGGGAA
GAACAGATTACCATTCGGAATATCATGGATACCGCAGGGTCTGAGCGCTG
CGCTGCTCTTGGGTACATTTGTGTTGGGTGTTGGCACCGGTGTTACTGTC
GATTCTGCAGTTAACACAAACAAGAAAGACCTTGCGTCTCGCGATGCCAT
CGATAAGAACGCTCCCAACCCTAAGTTTTGCCAGATGCGGCTCTGTCGAG
GTTTCTTGTATCCTCGACTTTTTAACGCCTGCCAAGTAAGGCGTGTGTAT
TCTGGTGCTCCATTACCAATATGTAATATGGATCCAAGGAGTGGAAGACG
CGCCAAAATATCTATGCAGAGTATGTATGACAAGGAAGGCAATCGGCGCC
GCCGAGTACGCAGTCGAGTAAATCGGAAGGGCGAGGATGCGGACGAGGAA
GGCGATGATGAAGAAGAGGAATATCGAGCAATGCGTCCCCCGGCTCTAGA
CAGAGTCCGCCCTCCTCCTTTCTCAAGAGGCCGTCCAGGTCAATGTGTGT
AAAAATGGCAACAACACGTGGGCATACGTAGGCGATATAAACGACAAACC
ACAGCTTTCTTGTGTGTATCAATCTGACGACGCGCAAAATGAGTTTCTGG
AGAAGAATCCGAAGCTGGGTGTGGGAGAAGACGTGTATGACAAGTAACGC
TACGGTGCCAGTACATTGGTTCTTGACAACCGAATATTTGTGTCGTTTAA
TCCTTTCGATGTGTATGTGACGCAGGCGGATGTGAAGCCTGGTTGCGTTT
TGCGTGCTGCCAATGTAGTCCAGGCCCTGCAAGGCAGGGGATTGCTAACG
GACGAGGAGAAGTCGGGAAGAACAGATTACCATTCGGAATATCATGGATA
CCGCAGGGTCTGAGCGCTGCGCTGCTCTTGGGTACATTTGTGTTGGGTGT
TGGCACCGGTGTTACTGTCGATTCTGCAGTTAACACAAACAAGAAAGACC
TTGCGTCTCGCGATGCCATCGATAAGAACGCTCCCAACCCTAAGTTTTGC
CAGATGCGGCTCTGTCGAGGTTTCTTGTATCCTCGACTTTTTAACGCCTG
CCAAGTAAGGCGTGTGTATTCTGGTGCTCCATTACCAATATGTAATATGG
ATCCAAGGAGTGGAAGACGCGCCAAAATATCTATGCAGAGTATGTATGAC
AAGGAAGGCAATCGGCGCCGCCGAGTACGCAGTCGAGTAAATCGGAAGGG
CGAGGATGCGGACGAGGAAGGCGATGATGAAGAAGAGGAATATCGAGCAA
TGCGTCCCCCGGCTCTAGACAGAGTCCGCCCTCCTCCTTTCTCAAGAGGC
CGTCCAGGTCAATGTGTGTAAAAATGGCAACAACACGTGGGCATACGTAG
GCGATATAAACGACAAACCACAGCTTTCTTGTGTGTATCAATCTGACGAC
GCGCAAAATGAGTTTCTGGAGAAGAATCCGAAGCTGGGTGTGGGAGAAGA
CGTGTATGACAAGTAACGCTACGGTGCCAGTACATTGGTTCTTGACAACC
GAATATTTGTGTCGTTTAATCCTTTCGATGTGTATGTGACGCAGGCGGAT
GTGAAGCCTGGTTGCGTTTTGCGTGCTGCCAATGTAGTCCAGGCCCTGCA
AGGCAGGGGATTGCTAACGGACGAGGAGAAGTCGGGAAGAACAGATTACC
ATTCGGAATATCATGGATACCGCAGGGTCTGAGCGCTGCGCTGCTCTTGG
GTACATTTGTGTTGGGTGTTGGCACCGGTGTTACTGTCGATTCTGCAGTT
AACACAAACAAGAAAGACCTTGCGTCTCGCGATGCCATCGATAAGAACGC
TCCCAACCCTAAGTTTTGCCAGATGCGGCTCTGTCGAGGTTTCTTGTATC
CTCGACTTTTTAACGCCTGCCAAGTAAGGCGTGTGTATTCTGGTGCTCCA
TTACCAATATGTAATATGGATCCAAGGAGTGGAAGACGCGCCAAAATATC
TATGCAGAGTATGTATGACAAGGAAGGCAATCGGCGCCGCCGAGTACGCA
GTCGAGTAAATCGGAAGGGCGAGGATGCGGACGAGGAAGGCGATGATGAA
GAAGAGGAATATCGAGCAATGCGTCCCCCGGCTCTAGACAGAGTCCGCCC
TCCTCCTTTCTCAAGAGGCCGTCCAG back to top
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