EWM24667.1, cds6017 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|585106189|gb|EWM24667.1| (Protein of unknown function DUF3172 [Nannochloropsis gaditana]) HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MRLCRGFLYPRLFNACQVRRVYSGAPLPICNMDPRSGRRAKISMQSMYDKEGNRRRRVRSRVNRKGEDADEEGDDEEEEYRAMRPPALDRVRPPPFSRGRPEVGKNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYDK 272 MRLCRGFLYPRLFNACQVRRVYSGAPLPICNMDPRSGRRAKISMQSMYDKEGNRRRRVRSRVNRKGEDADEEGDDEEEEYRAMRPPALDRVRPPPFSRGRPEVGKNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYDK Sbjct: 1 MRLCRGFLYPRLFNACQVRRVYSGAPLPICNMDPRSGRRAKISMQSMYDKEGNRRRRVRSRVNRKGEDADEEGDDEEEEYRAMRPPALDRVRPPPFSRGRPEVGKNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYDK 272
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|298710540|emb|CBJ25604.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 240.35 bits (612), Expect = 4.171e-75 Identity = 111/161 (68.94%), Postives = 134/161 (83.23%), Query Frame = 0 Query: 112 ISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQ-GRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271 + +P LS AL+ G FVLG+GTGVTVDSA+NT+ +DLASRDAID+NAPNP CQ YG+S +V+D R+FV+FNPF ++V+QAD KPGCVLR++NVV+ LQ RGLLT+E+V CK G NTW YVGD+ND PQLSCVYQSDDAQNEFL NPK G+GEDVYD Sbjct: 115 VPLLPATLSKALIAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLS-NPKYGLGEDVYD 274
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|397619992|gb|EJK65488.1| (hypothetical protein THAOC_13645 [Thalassiosira oceanica]) HSP 1 Score: 228.794 bits (582), Expect = 8.908e-71 Identity = 113/190 (59.47%), Postives = 135/190 (71.05%), Query Frame = 0 Query: 88 LDRVRPPPFSRGRPEVGKNRLPFGISW------IPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271 +D + PP + P+ +P +P +SAALL G FVLG+GTGVTVDS +NTN KDLASRDA+DKNAPNP C YGAS + D R+FVSFNPF+VYV QADVKP CVLR +NVV L+ R LL D EV CK NTWA+VGD+ND+PQLSCVY+S+DAQNEFLE +PK G+GED D Sbjct: 67 VDDLGTPPLTGSSPDDTSLSIPSSFGRGDTGMRMPSSVSAALLAGVFVLGIGTGVTVDSQINTNPKDLASRDAVDKNAPNPTLCTTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPVLKERKLLNDNEVRGCKMNMNTWAFVGDLNDQPQLSCVYKSEDAQNEFLE-DPKRGIGEDYLD 255
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|224011066|ref|XP_002294490.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220969985|gb|EED88324.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 219.935 bits (559), Expect = 2.456e-69 Identity = 105/152 (69.08%), Postives = 122/152 (80.26%), Query Frame = 0 Query: 117 QGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGED 268 +SAALL G FVLG+GTGVTVDS +NTN KDLASRDA+DKNAPNP C YGAS + D R+FVSFNPF+VYV QADVKP CVLR AN+V L+ R LL D E+ CK NTWA+VGD+ND+PQLSCVY+S+DAQNEFLE +PK G+GED Sbjct: 1 SSVSAALLAGVFVLGIGTGVTVDSQINTNPKDLASRDAVDKNAPNPTLCTTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPANIVPILKERKLLNDNEIRGCKMNMNTWAFVGDLNDQPQLSCVYKSEDAQNEFLE-DPKRGIGED 151
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|1210520996|dbj|GAX20229.1| (hypothetical protein FisN_12Hh078 [Fistulifera solaris]) HSP 1 Score: 221.09 bits (562), Expect = 6.595e-68 Identity = 103/157 (65.61%), Postives = 123/157 (78.34%), Query Frame = 0 Query: 115 IPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271 +P+ +S +LL G FVLGVG GVT+DS VNTN KDLASRDAID+ APNP C + GAS + D R+FVSFNPF+VYV+QADVKP CVLR ANVV L+ +GL+ D+EV CK NTWA+VG++ D PQLSCVY+S DAQNEFL NPKLG+GED D Sbjct: 100 LPESVSKSLLAGVFVLGVGLGVTIDSQVNTNPKDLASRDAIDQAAPNPTLCAKLGASAMAFDQRVFVSFNPFNVYVSQADVKPACVLREANVVPVLRAKGLINDQEVRACKQNMNTWAFVGNLEDTPQLSCVYKSQDAQNEFLS-NPKLGIGEDYLD 255
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|1210526299|dbj|GAX15217.1| (hypothetical protein FisN_12Lh078 [Fistulifera solaris]) HSP 1 Score: 220.32 bits (560), Expect = 1.136e-67 Identity = 103/157 (65.61%), Postives = 123/157 (78.34%), Query Frame = 0 Query: 115 IPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271 +P+ +S +LL G FVLGVG GVT+DS VNTN KDLASRDAID+ APNP C + GAS + D R+FVSFNPF+VYV+QADVKP CVLR ANVV L+ +GL+ D+EV CK NTWA+VG++ D PQLSCVY+S DAQNEFL NPKLG+GED D Sbjct: 88 LPESVSKSLLAGVFVLGVGLGVTIDSQVNTNPKDLASRDAIDQAAPNPTLCAKLGASAMAFDQRVFVSFNPFNVYVSQADVKPACVLREANVVPVLRAKGLINDQEVRACKQNMNTWAFVGNLEDTPQLSCVYKSQDAQNEFLS-NPKLGIGEDYLD 243
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|1072230645|gb|OEU15378.1| (hypothetical protein FRACYDRAFT_269337 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 214.542 bits (545), Expect = 7.263e-65 Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 0 Query: 115 IPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYD 271 +P +S +LL G FVLG+G GVTVDSA+NTN +DL+SRDAID+ APN K C GAS + D R+FVSFNPF+VYV QADVKP CVLR++NVV L+ R L+ D+EV CK+ NTWA+VGD+++KPQLSCVY+S+DAQNEFLE NP G+GED D Sbjct: 127 LPDAVSKSLLAGIFVLGIGLGVTVDSAINTNPRDLSSRDAIDQAAPNSKLCADMGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRSSNVVPILKDRKLINDKEVFACKSNMNTWAFVGDLDNKPQLSCVYKSEDAQNEFLE-NPTYGIGEDYLD 282
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|219121668|ref|XP_002181184.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407170|gb|EEC47107.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 199.904 bits (507), Expect = 1.352e-61 Identity = 95/141 (67.38%), Postives = 108/141 (76.60%), Query Frame = 0 Query: 118 GLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLE 258 +S ALL G FVLGVG GVT+DS VNTN KDLASRDAID APNP C + GAS + D R+FVSFNPF+VYV+QADVKP CVLR ANVV L+ RGL+ D EV CK NTWA+VG ++D PQLSCVY+S DAQNEFL Sbjct: 1 SVSKALLAGVFVLGVGLGVTIDSQVNTNPKDLASRDAIDNAAPNPTLCAKLGASAMAFDQRVFVSFNPFNVYVSQADVKPACVLREANVVPILKARGLINDNEVRSCKQNMNTWAFVGSLDDTPQLSCVYRSQDAQNEFLS 141
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|168001409|ref|XP_001753407.1| (predicted protein [Physcomitrella patens] >gi|162695286|gb|EDQ81630.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 160.999 bits (406), Expect = 4.199e-44 Identity = 73/151 (48.34%), Postives = 105/151 (69.54%), Query Frame = 0 Query: 117 QGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGE 267 +G + +L G FVLG+G G+TVD+ +N ++ASR+ ID+ PNP C G S +VLD R+F+SFNPF+VYV+Q +VKPGCVLR +N L+ RGL+T +EV CK NT+ +VGD+ P++SCVY S+ A+N+FL+ K +G+ Sbjct: 164 RGANRYILAGMFVLGMGAGITVDTVLNVEPNNVASREVIDRQTPNPDVCIANGMSAMVLDQRLFISFNPFNVYVSQTEVKPGCVLRQSN-WSVLEARGLVTSDEVRACKRNMNTFGFVGDLRQAPEISCVYHSESAENQFLKDPSKATLGD 313
BLAST of EWM24667.1 vs. NCBI_GenBank
Match: gi|1026768210|gb|OAE28412.1| (hypothetical protein AXG93_115s1010 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 159.844 bits (403), Expect = 1.101e-43 Identity = 89/232 (38.36%), Postives = 137/232 (59.05%), Query Frame = 0 Query: 56 RRVRSRVNRKGEDADEEGDD-------------EEEEYRAMRPPALDRVRPPPFSRGRPEVG-------KNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGE 267 R +RS+ NRKG +D D+ ++EE +R + P R E+G +R+ G++ + QG++ +L G FVLG+G G+ VD+ +N ++ASR+ ID+ PNP C G S +VLD R+F++FNPF+VYV+QA+VKPGCVL +N + L+ RGL+ EEV CK NT+ +VGD+ P+++CVY S+ A+N+FL+ K +G+ Sbjct: 73 RALRSKENRKGFRSDTPPDEFPRGSSKGPMPSVDDEELPKIREYTRRKESSP--LREDEEIGGWEYRQSPSRVENGVTALTQGVNRYVLGGLFVLGMGAGIAVDTVLNVEPNNIASREVIDRQTPNPDVCIANGMSAMVLDQRLFITFNPFNVYVSQAEVKPGCVLLQSN-WRVLESRGLVNSEEVRDCKRNFNTFGFVGDLRQAPEINCVYHSEAAENQFLKDPSKAALGD 301 The following BLAST results are available for this feature:
BLAST of EWM24667.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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