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Properties
| Property Name | Value |
|---|
| Product | eukaryotic translation initiation factor 4 |
| Orig transcript id | gnl|cribi|Naga_100055g25.7319.mrna |
| Orig protein id | gnl|cribi|Naga_100055g25.7319 |
| Gene | EIF4G |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:404676..408155 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6029 ID=rna6029|Name=rna6029|organism=Nannochloropsis gaditana|type=mRNA|length=462bp
ATGTTGCTGGAAGGGGCAGCTTCATCCTTCAAGGAAAGCCGTGGAAGCGT
GTTCTGTGCCAATTACTGTCTTGCTATCGAAAAAAAAACGCTTCATCTTC
CTGCACTAGAGGTACCCTGGGCGGCTCGGATCGAACGAGGGAGGCGAGCA
AGCAACTCGCAACCTGCCCGCGTAGTGGTAAAGCAGCACCTAGAGCTGGG
AGAGGTATCATGTTATGAACTCGTGGGTTTCCCTTTAAGTTACAATCACG
ATCGAAAAGCAGAAATTGAGTCCGATCTGACGTCGCCTGTCAGCCTGCCA
GGAAGAGGAGGGGGCAGTCGACAAGACGGAACGCAAAACCTGGAACGCTG
TCATTGGTCCTCTTTGATCTTTGAGCAGTGCGCGCGACGTTCGTACCTCT
CAGCCAGCGAGTTCACCACGTGTCATTACAAAGAGGGGTGCAACTTTAAT
TCCACCCAGTAG back to topprotein sequence of rna6029 >rna6029-protein ID=rna6029-protein|Name=rna6029|organism=Nannochloropsis gaditana|type=polypeptide|length=1159bp
MSTTEGASAADGISRVASANGRDNSMKALASILRAEPLPVGVDTHKKSLS
AAAPAFKPMKLRPDAHVFVPKSAFKAPAPPTGPKAAAPVRAQKTEAPALP
RGPAVAPLGAGKPSATARAPPPIAASLPPPRQADRHQQLSLPSPRYEERL
GPKDGSTPPGGPPLAGGRQYPPHQHPEARPVPAPETRARHNRQAVTGPEG
GTRPTPPRLKGTRTSTMSNGTPSVEMNVVSVAKTDAEDTDIATAPHCGQG
ADNVATPAPRALVQPQPTESLSVSPDREVSGSSSASSSWKRAERPSTPTS
SSLFGGSAVAVAAPVPLNAHRAISEEDWERESHPAIPDSPLVAGVRQYYA
RDLLRIRRTVVEAGSLGKPPVKPVDSHVPAEILNSEPPGASPITPTLAPS
TTLETPQPQRARTPKVPDGLPRPRSSTGFDGPGGNGSGSSGRSTPRTEIE
SSAFVRQSSRDRRGGLKGSLGVRGGGGNYRKASPPLEDDLYGPKRIEEGR
RWRPESIAMRRMGGVDPDDPEKKIKRARALLNKLSMEKFDKLSAEFVNVG
FTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGLGETDKGK
LFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRY
LGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTT
GKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDL
FELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKMTG
NSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVGP
KKTISKSGSKQSLGRSASNNSLDGTMGGMRKQGSSASFGAFSVLTEEKRK
KKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPR
PSSAVDISPEASSSKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGE
MTLEDPDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPV
EQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQM
VKDGVAFPFAMTVIKEAKREIGVKGVDEMVRSASLNLELLRGGDLEDEKL
ASEFEGLSC back to topmRNA from alignment at CM002467.1:404676..408155+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6029 ID=rna6029|Name=rna6029|organism=Nannochloropsis gaditana|type=mRNA|length=3480bp|location=Sequence derived from alignment at CM002467.1:404676..408155+ (Nannochloropsis gaditana)
ATGAGTACAACCGAAGGCGCGAGTGCGGCGGATGGCATATCGCGAGTGGC
GAGTGCAAATGGTAGGGACAACAGCATGAAAGCTTTGGCATCGATTTTGC
GTGCAGAGCCTCTACCCGTGGGCGTCGACACGCACAAAAAGTCCCTAAGC
GCGGCAGCGCCCGCCTTCAAACCTATGAAGCTGCGGCCGGACGCCCACGT
CTTCGTCCCAAAGAGCGCCTTCAAagcgcccgccccgcccactGGGCCCA
AAGCAGCTGCCCCAGTCCGCGCACAGAAGACAGAGGCACCCGCACTTCCG
CGGGGCCCCGCAGTTGCACCCTTGGGAGCTGGCAAACCATCCGCGACGGc
acgtgcccccccccccatcgcggcttcgcttcccccccctcgtcaaGCCG
ATCGTCACCAAcagctttctctcccttcgccgCGTTATGAGGAGAGGCTT
GGGCCCAAGGATGGAAGTACGCCGCCGGGAGGCCCTCCACTAGCCGGTGG
TAGACAAtaccctccccaccagcaCCCGGAAGCCAGGCCCGTCCCGGCAC
CGGAGACCCGAGCAAGACACAACCGCCAGGCCGTCACTGGACCGGAGGGG
GGTACTCGCCCAACCCCGCCTCGGCTTAAAGGAACACGCACCTCTACAAT
GAGCAACGGCACGCCAAGTGTGGAGATGAATGTAGTCTCCGTCGCCAAGA
CGGACGCTGAAGACACAGACATCGCCACGGCGCCGCATTGTGGTCAGGGC
GCCGACAATGTGGCAACACCCGCTCCGCGGGCACTGGTTCAGCCTCAACC
GACGGAGAGCTTGTCTGTGAGCCCGGATCGAGAGGTGAGTGGCTCCTCGT
CGGCCTCGTCTTCGTGGAAGAGAGCCGAGCGGCCCAGCACCCCCACGAGC
AGCAGCCTTTTCGGTGGGAGTGCGGTCGCCGTGGCGGCACCTGTACCGCT
GAATGCCCATAGAGCAATTAGCGAAGAAGATTGGGAGCGGGAGTCACACC
CGGCAATCCCTGACTCCCCATTGGTGGCAGGGGTGCGACAATACTACGCC
AGGGACTTGCTTCGTATCCGCAGGActgtggtggaggcgggatcTTTGGG
GAAGCCGCCCGTCAAGCCTGTGGACAGTCACGTCCCCGCAGAAATCCTTA
ATTCGGAACCGCCTGGGGCATCACCTATAACGCCTACCCTGGCGCCGAGT
ACCACCCTGGAGACCCCCCAGCCTCAGCGTGCGCGCACCCCCAAAGTCCC
TGATGGCCTCCCTCGGCCTCGCAGCAGCACGGGATTCGATGGTCCGGGTG
GGAATGGGAGCGGGAGTAGCGGACGTAGTACTCCGCGTACGGAAATAGAA
TCTTCAGCATTCGTCCGACAGAGCAGTCGCGATCGTCGAGGAGGCTTAAA
GGGGAGCCTGGGAGttcgaggggggggcggtaaCTACCGGAAAGCCTCGC
CGCCGTTGGAGGACGATCTTTACGGCCCAAAGCGCATCGAAGAAGGACGT
CGGTGGCGCCCGGAGTCAATAGCCATGCGACGGATGGGGGGGGTCGACCC
CGATGATCCTGAGAAGAAAATCAAACGGGCACGAGCCTTACTGAACAAAC
TGTCGATGGAGAAATTTGACAAATTGAGCGCGGAGTTTGTCAATGTAGGG
TTCACTTCAGATGCTCTATTGTGGCAGGCAATCGATATCATTGTTGCCAA
GGCACAGGAAGAGGTGCACTTCTCTTCTATGTATGCAGAGCTCTGTTTGC
GATTATCTCGGACTCCGCTGGCGGGGCTTGGGGAGACAGACAAGGGCAAG
CTTTTTCGAAAAATTTTGCTGACGCGCTGTCAAGAGGAGTTCAATGAAGA
TCTGAACACGCGGATTTGTAAGGTCGACACAGATCCCAGTACAGCTGCGc
tggggaaagaagagcgggaggagaagaaacgcATGGCCAAGTTTCGGTAC
TTAGGCCACATGCGTTTCATCGGTGAGCTCTTCCTGAAGGAATTATTGAA
AGAAGAGCATGTGCACGGCTGCATCAAAGATCTAttcggagaggaggata
atCCCGATGAAGAGAAGCTCGCTTGCCTATGCAAACTACTGAGTACAACA
GGGAAAAAGCTTGAACTTTTGGCCGAGGTTAACGCGGAGACATCAAAAAA
ACAGCGCCGGCTCCTCAACAAGTATTTCGAAGAAGTTTACAAACTTTCGC
AATCTGTCGGGGTCTTGAGCTCGCGAATCCGGTGTCTTCTGAAAGATTTG
TTCGAGCTTCGACAAAATAATTACGTGCCGCGACGCGTTGTCGAAACGGC
CAAGACTCTTTCTCAAGTTCATGAAGAGGCTGCTCGGGAGGCACTCGCCA
AAGGCCAAAGCTCTGCTCCCAAGAGCATGGGTAGTGGGAAAATGACAGGC
aacagtggaggaggaggtcgaccTATGGGATCCGGGGCTCAGGATACGCG
CAGGGAGAAAGGATTTAGTGAAACGAGCCGTCAGTCGTCATCAGCGAGCC
TGACATCGCCCTCCATAGTAGATGAAGATGGTTGGGAAACAGTGGGTCCC
AAGAAAACGATCAGCAAGTCAGGAAGTAAACAAAGCCTCGGACGTTCTGC
GTCGAACAACAGTCTTGATGGCACGATGGGTGGTATGAGAAAGCAGGGAA
GCAGTGCTAGTTTCGGCGCATTCTCGGTCCTaacggaggagaagcgaaag
aagaaggaacaCAAGGACAAAAGGGACAAGGACAATAAAGaacagaggaa
ggagaggaggaccagtACTGCACAAACAGATTCAGCTAAGCGTGCAGGTA
TTGAAGTCAAGTCAGGTGGAAAAGACGGGGAACTTGCTGGCAGCCCTCGC
CCGTCTTCAGCGGTGGATATATCACCCGAAGCGTCAAGTAGCAAACTACC
ACCAAACGATCATAAAGCATTTTTGCGCAAGGGGAAGTCCATTCTGGCGG
ATTATTGGGAGACTCAAGATGAAGCAGATGCTATTGAAGCCATGGGAGAA
ATGACATTAGAGGATCCAGACAAAATATCTCAACTTGTAGCTGCCTGGTT
GGACGCCGGTTTTCAGCGAAGCAGAGACGATCATCGAGCCCATCTTGCTG
ACCTATTGGTGATCATGCGCAAAGCCGAACTgttgcctcctgctccagtG
GAGCAAGCATTGTACGGAATTTTAGAGTCTCTAGCGGACACGAAAGTTGA
TATACCCAAAGTCGACGAATGGATGGCTAAGATCGTCGTCCGCCTAATAA
ATGGCGacgttctctccctctcattcCTACAGGACTTGCCAGAGCAAATG
GTAAAAGATGGGGTTGCCTTTCCTTTCGCCATGACGGTCATAAAAGAAGC
CAAGCGTGAAATTGGTGTTAAAGGTGTCGATGAAATGGTGCGGAGTGCAA
GTCTAAACTTGGAATTGTTGAGAGGCGGTGacttggaggacgagaaactG
GCAAGCGAATTCGAAGGTCTATCTTGTTGA back to topCoding sequence (CDS) from alignment at CM002467.1:404676..408155+ >rna6029 ID=rna6029|Name=rna6029|organism=Nannochloropsis gaditana|type=CDS|length=3480bp|location=Sequence derived from alignment at CM002467.1:404676..408155+ (Nannochloropsis gaditana)
ATGAGTACAACCGAAGGCGCGAGTGCGGCGGATGGCATATCGCGAGTGGC
GAGTGCAAATGGTAGGGACAACAGCATGAAAGCTTTGGCATCGATTTTGC
GTGCAGAGCCTCTACCCGTGGGCGTCGACACGCACAAAAAGTCCCTAAGC
GCGGCAGCGCCCGCCTTCAAACCTATGAAGCTGCGGCCGGACGCCCACGT
CTTCGTCCCAAAGAGCGCCTTCAAagcgcccgccccgcccactGGGCCCA
AAGCAGCTGCCCCAGTCCGCGCACAGAAGACAGAGGCACCCGCACTTCCG
CGGGGCCCCGCAGTTGCACCCTTGGGAGCTGGCAAACCATCCGCGACGGc
acgtgcccccccccccatcgcggcttcgcttcccccccctcgtcaaGCCG
ATCGTCACCAAcagctttctctcccttcgccgCGTTATGAGGAGAGGCTT
GGGCCCAAGGATGGAAGTACGCCGCCGGGAGGCCCTCCACTAGCCGGTGG
TAGACAAtaccctccccaccagcaCCCGGAAGCCAGGCCCGTCCCGGCAC
CGGAGACCCGAGCAAGACACAACCGCCAGGCCGTCACTGGACCGGAGGGG
GGTACTCGCCCAACCCCGCCTCGGCTTAAAGGAACACGCACCTCTACAAT
GAGCAACGGCACGCCAAGTGTGGAGATGAATGTAGTCTCCGTCGCCAAGA
CGGACGCTGAAGACACAGACATCGCCACGGCGCCGCATTGTGGTCAGGGC
GCCGACAATGTGGCAACACCCGCTCCGCGGGCACTGGTTCAGCCTCAACC
GACGGAGAGCTTGTCTGTGAGCCCGGATCGAGAGGTGAGTGGCTCCTCGT
CGGCCTCGTCTTCGTGGAAGAGAGCCGAGCGGCCCAGCACCCCCACGAGC
AGCAGCCTTTTCGGTGGGAGTGCGGTCGCCGTGGCGGCACCTGTACCGCT
GAATGCCCATAGAGCAATTAGCGAAGAAGATTGGGAGCGGGAGTCACACC
CGGCAATCCCTGACTCCCCATTGGTGGCAGGGGTGCGACAATACTACGCC
AGGGACTTGCTTCGTATCCGCAGGActgtggtggaggcgggatcTTTGGG
GAAGCCGCCCGTCAAGCCTGTGGACAGTCACGTCCCCGCAGAAATCCTTA
ATTCGGAACCGCCTGGGGCATCACCTATAACGCCTACCCTGGCGCCGAGT
ACCACCCTGGAGACCCCCCAGCCTCAGCGTGCGCGCACCCCCAAAGTCCC
TGATGGCCTCCCTCGGCCTCGCAGCAGCACGGGATTCGATGGTCCGGGTG
GGAATGGGAGCGGGAGTAGCGGACGTAGTACTCCGCGTACGGAAATAGAA
TCTTCAGCATTCGTCCGACAGAGCAGTCGCGATCGTCGAGGAGGCTTAAA
GGGGAGCCTGGGAGttcgaggggggggcggtaaCTACCGGAAAGCCTCGC
CGCCGTTGGAGGACGATCTTTACGGCCCAAAGCGCATCGAAGAAGGACGT
CGGTGGCGCCCGGAGTCAATAGCCATGCGACGGATGGGGGGGGTCGACCC
CGATGATCCTGAGAAGAAAATCAAACGGGCACGAGCCTTACTGAACAAAC
TGTCGATGGAGAAATTTGACAAATTGAGCGCGGAGTTTGTCAATGTAGGG
TTCACTTCAGATGCTCTATTGTGGCAGGCAATCGATATCATTGTTGCCAA
GGCACAGGAAGAGGTGCACTTCTCTTCTATGTATGCAGAGCTCTGTTTGC
GATTATCTCGGACTCCGCTGGCGGGGCTTGGGGAGACAGACAAGGGCAAG
CTTTTTCGAAAAATTTTGCTGACGCGCTGTCAAGAGGAGTTCAATGAAGA
TCTGAACACGCGGATTTGTAAGGTCGACACAGATCCCAGTACAGCTGCGc
tggggaaagaagagcgggaggagaagaaacgcATGGCCAAGTTTCGGTAC
TTAGGCCACATGCGTTTCATCGGTGAGCTCTTCCTGAAGGAATTATTGAA
AGAAGAGCATGTGCACGGCTGCATCAAAGATCTAttcggagaggaggata
atCCCGATGAAGAGAAGCTCGCTTGCCTATGCAAACTACTGAGTACAACA
GGGAAAAAGCTTGAACTTTTGGCCGAGGTTAACGCGGAGACATCAAAAAA
ACAGCGCCGGCTCCTCAACAAGTATTTCGAAGAAGTTTACAAACTTTCGC
AATCTGTCGGGGTCTTGAGCTCGCGAATCCGGTGTCTTCTGAAAGATTTG
TTCGAGCTTCGACAAAATAATTACGTGCCGCGACGCGTTGTCGAAACGGC
CAAGACTCTTTCTCAAGTTCATGAAGAGGCTGCTCGGGAGGCACTCGCCA
AAGGCCAAAGCTCTGCTCCCAAGAGCATGGGTAGTGGGAAAATGACAGGC
aacagtggaggaggaggtcgaccTATGGGATCCGGGGCTCAGGATACGCG
CAGGGAGAAAGGATTTAGTGAAACGAGCCGTCAGTCGTCATCAGCGAGCC
TGACATCGCCCTCCATAGTAGATGAAGATGGTTGGGAAACAGTGGGTCCC
AAGAAAACGATCAGCAAGTCAGGAAGTAAACAAAGCCTCGGACGTTCTGC
GTCGAACAACAGTCTTGATGGCACGATGGGTGGTATGAGAAAGCAGGGAA
GCAGTGCTAGTTTCGGCGCATTCTCGGTCCTaacggaggagaagcgaaag
aagaaggaacaCAAGGACAAAAGGGACAAGGACAATAAAGaacagaggaa
ggagaggaggaccagtACTGCACAAACAGATTCAGCTAAGCGTGCAGGTA
TTGAAGTCAAGTCAGGTGGAAAAGACGGGGAACTTGCTGGCAGCCCTCGC
CCGTCTTCAGCGGTGGATATATCACCCGAAGCGTCAAGTAGCAAACTACC
ACCAAACGATCATAAAGCATTTTTGCGCAAGGGGAAGTCCATTCTGGCGG
ATTATTGGGAGACTCAAGATGAAGCAGATGCTATTGAAGCCATGGGAGAA
ATGACATTAGAGGATCCAGACAAAATATCTCAACTTGTAGCTGCCTGGTT
GGACGCCGGTTTTCAGCGAAGCAGAGACGATCATCGAGCCCATCTTGCTG
ACCTATTGGTGATCATGCGCAAAGCCGAACTgttgcctcctgctccagtG
GAGCAAGCATTGTACGGAATTTTAGAGTCTCTAGCGGACACGAAAGTTGA
TATACCCAAAGTCGACGAATGGATGGCTAAGATCGTCGTCCGCCTAATAA
ATGGCGacgttctctccctctcattcCTACAGGACTTGCCAGAGCAAATG
GTAAAAGATGGGGTTGCCTTTCCTTTCGCCATGACGGTCATAAAAGAAGC
CAAGCGTGAAATTGGTGTTAAAGGTGTCGATGAAATGGTGCGGAGTGCAA
GTCTAAACTTGGAATTGTTGAGAGGCGGTGacttggaggacgagaaactG
GCAAGCGAATTCGAAGGTCTATCTTGTTGA back to top
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