EWM24635.1, cds6014 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|585106157|gb|EWM24635.1| (eukaryotic translation initiation factor 4 [Nannochloropsis gaditana]) HSP 1 Score: 2346.24 bits (6079), Expect = 0.000e+0 Identity = 1159/1159 (100.00%), Postives = 1159/1159 (100.00%), Query Frame = 0
Query: 1 MSTTEGASAADGISRVASANGRDNSMKALASILRAEPLPVGVDTHKKSLSAAAPAFKPMKLRPDAHVFVPKSAFKAPAPPTGPKAAAPVRAQKTEAPALPRGPAVAPLGAGKPSATARAPPPIAASLPPPRQADRHQQLSLPSPRYEERLGPKDGSTPPGGPPLAGGRQYPPHQHPEARPVPAPETRARHNRQAVTGPEGGTRPTPPRLKGTRTSTMSNGTPSVEMNVVSVAKTDAEDTDIATAPHCGQGADNVATPAPRALVQPQPTESLSVSPDREVSGSSSASSSWKRAERPSTPTSSSLFGGSAVAVAAPVPLNAHRAISEEDWERESHPAIPDSPLVAGVRQYYARDLLRIRRTVVEAGSLGKPPVKPVDSHVPAEILNSEPPGASPITPTLAPSTTLETPQPQRARTPKVPDGLPRPRSSTGFDGPGGNGSGSSGRSTPRTEIESSAFVRQSSRDRRGGLKGSLGVRGGGGNYRKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDPDDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGLGETDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKMTGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVGPKKTISKSGSKQSLGRSASNNSLDGTMGGMRKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDISPEASSSKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLEDPDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVAFPFAMTVIKEAKREIGVKGVDEMVRSASLNLELLRGGDLEDEKLASEFEGLSC 1159
MSTTEGASAADGISRVASANGRDNSMKALASILRAEPLPVGVDTHKKSLSAAAPAFKPMKLRPDAHVFVPKSAFKAPAPPTGPKAAAPVRAQKTEAPALPRGPAVAPLGAGKPSATARAPPPIAASLPPPRQADRHQQLSLPSPRYEERLGPKDGSTPPGGPPLAGGRQYPPHQHPEARPVPAPETRARHNRQAVTGPEGGTRPTPPRLKGTRTSTMSNGTPSVEMNVVSVAKTDAEDTDIATAPHCGQGADNVATPAPRALVQPQPTESLSVSPDREVSGSSSASSSWKRAERPSTPTSSSLFGGSAVAVAAPVPLNAHRAISEEDWERESHPAIPDSPLVAGVRQYYARDLLRIRRTVVEAGSLGKPPVKPVDSHVPAEILNSEPPGASPITPTLAPSTTLETPQPQRARTPKVPDGLPRPRSSTGFDGPGGNGSGSSGRSTPRTEIESSAFVRQSSRDRRGGLKGSLGVRGGGGNYRKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDPDDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGLGETDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKMTGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVGPKKTISKSGSKQSLGRSASNNSLDGTMGGMRKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDISPEASSSKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLEDPDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVAFPFAMTVIKEAKREIGVKGVDEMVRSASLNLELLRGGDLEDEKLASEFEGLSC
Sbjct: 1 MSTTEGASAADGISRVASANGRDNSMKALASILRAEPLPVGVDTHKKSLSAAAPAFKPMKLRPDAHVFVPKSAFKAPAPPTGPKAAAPVRAQKTEAPALPRGPAVAPLGAGKPSATARAPPPIAASLPPPRQADRHQQLSLPSPRYEERLGPKDGSTPPGGPPLAGGRQYPPHQHPEARPVPAPETRARHNRQAVTGPEGGTRPTPPRLKGTRTSTMSNGTPSVEMNVVSVAKTDAEDTDIATAPHCGQGADNVATPAPRALVQPQPTESLSVSPDREVSGSSSASSSWKRAERPSTPTSSSLFGGSAVAVAAPVPLNAHRAISEEDWERESHPAIPDSPLVAGVRQYYARDLLRIRRTVVEAGSLGKPPVKPVDSHVPAEILNSEPPGASPITPTLAPSTTLETPQPQRARTPKVPDGLPRPRSSTGFDGPGGNGSGSSGRSTPRTEIESSAFVRQSSRDRRGGLKGSLGVRGGGGNYRKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDPDDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGLGETDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKMTGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVGPKKTISKSGSKQSLGRSASNNSLDGTMGGMRKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDISPEASSSKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLEDPDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVAFPFAMTVIKEAKREIGVKGVDEMVRSASLNLELLRGGDLEDEKLASEFEGLSC 1159
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|1214712834|gb|OWZ23755.1| (Eukaryotic translation initiation factor [Phytophthora megakarya]) HSP 1 Score: 264.618 bits (675), Expect = 3.582e-70 Identity = 223/664 (33.58%), Postives = 331/664 (49.85%), Query Frame = 0
Query: 478 NYRKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDPDDP----EKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALG---KEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPK-------SMGSGKMTGNSGGGGRPMGS--GAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGMRKQGSS-ASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGI---EVKSGGKDGELAGSPRPSSAVDISPEASSSKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
N+ +P LED P I E RW+P S + R+ D+P E +K A+++LNKLS+EKFDKLS + ++V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + P L ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE N K +R +N Y+ + KLS +L +R+R +L+DL ELR +V RR A T+++VH E AREA K +SS K SM S TG+ G R GS GA + + + +S++S S VD DGWETV PK +S S R S+ S T G R S+ S AF+ L+ KD K+ TS+ + + G+ + +G A SP EA + P +AF +K K+IL +Y E +D +A + E+ + PDK+ L+ G ++ D RA +A L + +++ A +E AL G+LE D ++DIPK ++ ++V + +++S L + E + +G A
Sbjct: 283 NHHDTAPALED--CAPLEINEETRWKP-SHSKSRL-----DEPVETSEASLKEAKSILNKLSIEKFDKLSDQLIDVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCSKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF-----------EAKPEIEGLADMPEDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVSILFGDITAPDEESLECLCNLLSTIGQALE-----NNAREKAERDHINGYYATIKKLSGESKLLCTRVRFMLQDLLELRAKRWVARRKETKAMTIAEVHAEVAREAKEKERSSGGKARLQRSQSMNS---TGSVGSNDRRRGSGGGASAAWKARAAGSSPSSNSNSSAASAPTVDADGWETVTGGARPKGLKHRSNS----DRFPSSIS---TSGAPRHPSSARLSGNAFASLS--------GKDSGRKERGRSNSSSSTSSRSSRGREDFGLPPTPSSTKSNNGRAAKSP----------EAEAEAAPTLTAEAFEKKVKAILDEYVELEDLEEAYASFNELNAANHYALIPDKV-------LNIGLEKG-DKERAAIASFLTGLYDRKVVTGAALESALQGLLEFAEDIEIDIPKTLPYIGEMVAPSVVAGSITISQLVAMSENLCYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|568047040|gb|ETM44139.1| (hypothetical protein L914_10601 [Phytophthora parasitica]) HSP 1 Score: 264.233 bits (674), Expect = 4.012e-70 Identity = 228/707 (32.25%), Postives = 350/707 (49.50%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ D R +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKG-DKEREAIASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|675196247|ref|XP_008907008.1| (hypothetical protein PPTG_13048 [Phytophthora parasitica INRA-310] >gi|568092922|gb|ETN07723.1| hypothetical protein PPTG_13048 [Phytophthora parasitica INRA-310]) HSP 1 Score: 264.233 bits (674), Expect = 4.986e-70 Identity = 228/707 (32.25%), Postives = 349/707 (49.36%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAV-----DISPEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ D R +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSNNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKG-DKEREAIASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|566021337|gb|ETI44248.1| (hypothetical protein F443_11044 [Phytophthora parasitica P1569] >gi|567958667|gb|ETK84254.1| hypothetical protein L915_10768 [Phytophthora parasitica] >gi|568016667|gb|ETL90844.1| hypothetical protein L917_10557 [Phytophthora parasitica]) HSP 1 Score: 263.848 bits (673), Expect = 5.327e-70 Identity = 228/707 (32.25%), Postives = 350/707 (49.50%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ D R +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKG-DKEREAIASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|570981779|gb|ETP42124.1| (hypothetical protein F442_10945 [Phytophthora parasitica P10297]) HSP 1 Score: 263.848 bits (673), Expect = 5.480e-70 Identity = 228/707 (32.25%), Postives = 350/707 (49.50%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ D R +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKG-DKEREAIASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|570324961|gb|ETO72909.1| (hypothetical protein F444_11113 [Phytophthora parasitica P1976]) HSP 1 Score: 263.848 bits (673), Expect = 5.691e-70 Identity = 228/707 (32.25%), Postives = 350/707 (49.50%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ D R +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKG-DKEREAIASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|970646659|gb|KUF86739.1| (Eukaryotic translation initiation factor 4 gamma 1 [Phytophthora nicotianae]) HSP 1 Score: 262.692 bits (670), Expect = 1.188e-69 Identity = 227/707 (32.11%), Postives = 350/707 (49.50%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ + A +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 214 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKGNKEREA-IASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 857
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|970655362|gb|KUF93535.1| (Tenascin [Phytophthora nicotianae]) HSP 1 Score: 262.307 bits (669), Expect = 1.870e-69 Identity = 227/707 (32.11%), Postives = 350/707 (49.50%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSSA + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ + A +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSAKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKGNKEREA-IASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886
BLAST of EWM24635.1 vs. NCBI_GenBank
Match: gi|567987388|gb|ETL37694.1| (hypothetical protein L916_10658 [Phytophthora parasitica] >gi|570952038|gb|ETP17295.1| hypothetical protein F441_08304 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 262.307 bits (669), Expect = 1.905e-69 Identity = 227/707 (32.11%), Postives = 349/707 (49.36%), Query Frame = 0
Query: 462 RRGGLKGSLGVRGGGGNY------------------------RKASPPLEDDLYGPKRIEEGRRWRPESIAMRRMGGVDP-DDPEKKIKRARALLNKLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGL----GE--TDKGKLFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVHGCIKDLFGEEDNPDEEKLACLCKLLSTTGKKLELLAEVNAETSKKQRRLLNKYFEEVYKLSQSVGVLSSRIRCLLKDLFELRQNNYVPRRVVETAKTLSQVHEEAAREALAKGQSSAPKSMGSGKM--------TGNSGGGGRPMGSGAQDTRREKGFSETSRQSSSASLTSPSIVDEDGWETVG----PKKTISKSGSKQSLGRSASNNSLDGTMGGM------RKQGSSASFGAFSVLTEEKRKKKEHKDKRDKDNKEQRKERRTSTAQTDSAKRAGIEVKSGGKDGELAGSPRPSSAVDIS-----PEASS---SKLPPNDHKAFLRKGKSILADYWETQDEADAIEAMGEMTLED-----PDKISQLVAAWLDAGFQRSRDDHRAHLADLLVIMRKAELLPPAPVEQALYGILESLADTKVDIPKVDEWMAKIVVRLINGDVLSLSFLQDLPEQMVKDGVA 1106
RR SLG G GN+ +P LED P I E RW+P S A R+ DP ++ E +K A+++LNKLS+EKFDKLS + + V +L I++++AKAQ E HFS+MYAELC ++++T + + GE TD KLFRK+LL RCQ+EF + I +D+ P ++ER EK+ + K LGH+RF+GELF + +L +H C+ LFG+ PDEE L CLC LLST G+ LE A AE + +N Y+ + KLS +L +R+R +L+DL ELR N +V RR A T+++VH E AREA K +SS KS G ++ TG+ G R G+G + K + S + S++ ++P+ VD DGWETV PK G K RS S+ ++GG+ + SS +F + S ++RKER S + + ++ R+ + G+ P PSS + PE ++ S P +AF +K K+IL +Y E +D +A + E+ + P+K+ L+ G ++ D R +A L + +++ A +E AL +LE D ++DIPK +++++V + +++ L + E + +G A
Sbjct: 243 RRNDSSRSLGRHGSSGNFSEGRGRRERGSGRGGRGGRGGRGHHDTAPALED--CAPLDINEETRWKP-SHAKSRLD--DPVENSEASLKEAKSILNKLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTAMPAITLEEGEVVTDTHKLFRKLLLQRCQKEF--EAKPEIEGLDSLP------EDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMHECVGILFGDIAAPDEESLECLCNLLSTIGQALEANAREKAELNH-----INGYYATIKKLSGESKLLCTRVRFMLQDLLELRTNRWVARRKETKAMTIAEVHAEVAREAKEKERSST-KSGGHARLQRSQSMNSTGSVGSNDRRRGTGGGASAAWKARAAASSAAPSSTNSAPT-VDADGWETVTGGARPK------GLKH---RSNSDRFPASSLGGLPRHPSGTRLSSSNTFASLS--------------------GKERKERGRSNSSSSTSSRSSRGREDAGR------PPTPSSTKSSNGRSAKPEKTAETESTAPSLTAEAFEKKVKAILDEYVELEDMEEAYASFTELNAANHYALIPNKV-------LNIGLEKG-DKEREAIASFLAGLYDRKVVTSAALESALQDVLEFAEDIEIDIPKTLPYLSEMVAPSVVAGSITIPQLVTMTEHLRYNGKA 886 The following BLAST results are available for this feature:
BLAST of EWM24635.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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