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Properties
| Property Name | Value |
|---|
| Product | CCT domain protein |
| Orig transcript id | gnl|cribi|Naga_100055g29.7353.mrna |
| Orig protein id | gnl|cribi|Naga_100055g29.7353 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:393497..395268 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6024 ID=rna6024|Name=rna6024|organism=Nannochloropsis gaditana|type=mRNA|length=507bp
ATGGAAATGAGGGCAAGTTGTAGAGGGGGTCGAAAATGCATGTCTTCAGA
GAATGGAAATGTCAAAACATACAAGGGAAGGGGTAAGTCAGGAGCGAAGA
GAGGACGCAACGAGCAATGGTTTGAAGCATTCACGCGCTGCCGCACGCTC
TTCGGTACATTTGTGGATCTCATGGTGTATCGGCAAGATGTGCTCAATGG
GTCCCTAGTTGCGACATATCGTGCGGGCCCATTAAAGCACGTGATCACTG
GTGTGGAGGACGAGGGAGGACGAAAGTCGAGGTCGATGATAAGTGGTTGC
AGACGCCATCAATCTGTAGAAAGCTTTACCTCGAGATTGATGGTCCAAAA
CGCTGGTGAGAAAGACGGGAATGGTACGCTATGCAAGTGGACATCGAACG
ACTGGACGGGTGCGCGATTGAAAAATTCCTCCCTTCGAGCATTGCACTCC
TATCGTCGATTCTCTGATTTTGAAGGAAAGACGCCTTTTGAGATGATAAA
AGTCTAA back to topprotein sequence of rna6024 >rna6024-protein ID=rna6024-protein|Name=rna6024|organism=Nannochloropsis gaditana|type=polypeptide|length=487bp
MSTLSIHSAPSLGMEKLWDNYAPAERGEGAGCEEAGGSATFMVEDGGIIS
YAGIFLDDKEDSDDETSDSSTDAEVVMAHLHAAFGGVGAPQANSIFNTSS
GSGSTSTSGSTASIAPGSDGKGEEWKNAVLESLEDFLQTEGGIPAAGAGA
NRRFSFDLSNLDMQTLEQLAAGTTSGSSSRRGSFSLTLLEAEGFMTKSPP
ASSMAPLLSSGARFHSVPDNLPAGFSHTQEGCKEHVVCDCKKTLTTALGE
DGAGHSVPNASVSASKNTGTGASCALEPLTKPQVKKGFAAASTPTGESSP
DAPAASVSAASLLPTPQTPPKMPDPGDGPDNKTGANSSGTGSTDSMGTSG
TPNGNGGMLVLPVIPKDGVARIGIYTLEERKLRVARFQAKRGRRIWRKKI
KYDCRKKLADNRPRVKGRFVRRDEEIDIIVGGAVAAAEAAAAGGSANGSS
SALMNEQTLDELFRRGLLITLEDRFGTEESFEWKERK back to topmRNA from alignment at CM002467.1:393497..395268- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6024 ID=rna6024|Name=rna6024|organism=Nannochloropsis gaditana|type=mRNA|length=1772bp|location=Sequence derived from alignment at CM002467.1:393497..395268- (Nannochloropsis gaditana)
ATGAGTACACTGAGCATTCACTCGGCGCCCTCTCTCGGCATGGAGAAGCT
CTGGGATAATTACGCACCGGCGGAGCGTGGGGAAGGCGCAGGCTGCGAGG
AGGCTGGCGGCAGCGCGACCTTCATGGTGGAAGACGGAGGTATAATATCC
TACGCTGGCATTTTTTTGGACGATAAAGAGGACTCAGACGATGAAACGAG
TGATTCGTCAACAGACGCCGAAGTCGTGATGGCCCACCTGCACGCCGCGT
TCGGCGGTGTCGGGGCTCCTCAAGCGAACAGCATTTTTAACACCTCTTCT
GGCTCTGGCAGCACCAGCACAAGTGGCAGCACTGCCAGCATAGCTCCCGG
ATCTGATGGTAAAGGAGAAGAATGTAAGTAGTTGTCTCAAACAAGGGAAC
AAAAGTCCGGGGAGATGAGAGTTGTGATACACCCTCTAGCGCTGATATTT
CGTTGCATCTTCAGACTTGTCCACGGCTTATTGAAGCCGCCGGCCCTCTG
TGTTCTTCGCACTTGTGCTTACCTTGAGTTTGAATATCTGCACATGCATG
TCGTATTCTTGCCACTCGACAAATTTAGGGAAGAACGCGGTACTGGAAAG
CTTGGAGGACTTCTTACAAACGGAGGGAGGCATTCCTGCTGCCGGGGCAG
GGGCAAACCGTCGGTTCTCGTTCGACCTCTCCAATCTTGATATGCAGACG
TTGGAGCAATTGGCAGCTGGCACGACTTCAGGTTCGTCCTCTCGCCGAGG
TTCCTTCAGCTTGACCCTGCTGGAGGCCGAAGGCTTCATGACCAAGTCGC
CGCCGGCATCCTCAATGGCACCCTTATTGAGCAGCGGCGCCCGCTTCCAT
AGTGTGCCTGATAATTTGCCTGCAGGGTTCAGTCATACGCAGGAAGGATG
TAAGGAACATGTAGTCTGTGACTGCAAAAAGACCCTGACCACCGCCCTGG
GTGAGGATGGCGCCGGCCACTCGGTCCCGAACGCGAGTGTCTCCGCGAGC
AAAAACACGGGTACTGGAGCGTCTTGCGCACTTGAACCGTTGACCAAGCC
ACAGGTGAAGAAGGGGTTTGCGGCGGCGAGCACACCCACTGGGGAGTCCT
CGCCTGATGCGCCGGCGGCAAGTGTCTCTGCAGCCTCCTTATTGCCCACG
CCCCAAACGCCCCCTAAAATGCCGGATCCTGGGGATGGGCCTGACAACAA
GACGGGTGCGAACTCGAGCGGGACTGGCAGTACTGACAGCATGGGAACGT
CGGGAACTCCGAATGGGAACGGGGGGATGCTGGTGCTGCCGGTTATTCCT
AAAGACGGTGTTGCCCGCATCGGGATATACACCTTGGAGGAGCGAAAACT
CCGTGTAGCTCGATTTCAGGCAAAGCGTGGGCGGCGGATTTGGCGTAAAA
AGATTAAATACGACTGTCGAAAGAAGCTAGCGGATAATCGCCCTCGAGTA
AAGGGTCGCTTTGTGCGGCGAGATGAGGAGATCGACATCATCGTGGGCGG
CGCTGTGGCGGCAGCTGAGGCAGCAGCTGCAGGTGGATCGGCCAACGGGA
GTTCATCTGCCTTGTTGACGCAGCTGATGGATTTGGATGAGCTTCTGGAG
GACTGATGAGAAGGTGCGACTGGCGCGGCGCGGGAAGAAGGCTTTTGTCT
CGGTAAAGTAGGAAAGGATGAACGAGCAAACGCTGGACGAGCTCTTCAGA
CGCGGACTTCTTATTACTTTGGAGGACAGGTTTGGAACCGAAGAGTCCTT
TGAATGGAAAGAACGAAAGTAG back to topCoding sequence (CDS) from alignment at CM002467.1:393497..395268- >rna6024 ID=rna6024|Name=rna6024|organism=Nannochloropsis gaditana|type=CDS|length=4392bp|location=Sequence derived from alignment at CM002467.1:393497..395268- (Nannochloropsis gaditana)
GATGAACGAGCAAACGCTGGACGAGCTCTTCAGACGCGGACTTCTTATTA
CTTTGGAGGACAGGTTTGGAACCGAAGAGTCCTTTGAATGGAAAGAACGA
AAGTAGGGAAGAACGCGGTACTGGAAAGCTTGGAGGACTTCTTACAAACG
GAGGGAGGCATTCCTGCTGCCGGGGCAGGGGCAAACCGTCGGTTCTCGTT
CGACCTCTCCAATCTTGATATGCAGACGTTGGAGCAATTGGCAGCTGGCA
CGACTTCAGGTTCGTCCTCTCGCCGAGGTTCCTTCAGCTTGACCCTGCTG
GAGGCCGAAGGCTTCATGACCAAGTCGCCGCCGGCATCCTCAATGGCACC
CTTATTGAGCAGCGGCGCCCGCTTCCATAGTGTGCCTGATAATTTGCCTG
CAGGGTTCAGTCATACGCAGGAAGGATGTAAGGAACATGTAGTCTGTGAC
TGCAAAAAGACCCTGACCACCGCCCTGGGTGAGGATGGCGCCGGCCACTC
GGTCCCGAACGCGAGTGTCTCCGCGAGCAAAAACACGGGTACTGGAGCGT
CTTGCGCACTTGAACCGTTGACCAAGCCACAGGTGAAGAAGGGGTTTGCG
GCGGCGAGCACACCCACTGGGGAGTCCTCGCCTGATGCGCCGGCGGCAAG
TGTCTCTGCAGCCTCCTTATTGCCCACGCCCCAAACGCCCCCTAAAATGC
CGGATCCTGGGGATGGGCCTGACAACAAGACGGGTGCGAACTCGAGCGGG
ACTGGCAGTACTGACAGCATGGGAACGTCGGGAACTCCGAATGGGAACGG
GGGGATGCTGGTGCTGCCGGTTATTCCTAAAGACGGTGTTGCCCGCATCG
GGATATACACCTTGGAGGAGCGAAAACTCCGTGTAGCTCGATTTCAGGCA
AAGCGTGGGCGGCGGATTTGGCGTAAAAAGATTAAATACGACTGTCGAAA
GAAGCTAGCGGATAATCGCCCTCGAGTAAAGGGTCGCTTTGTGCGGCGAG
ATGAGGAGATCGACATCATCGTGGGCGGCGCTGTGGCGGCAGCTGAGGCA
GCAGCTGCAGGTGGATCGGCCAACGGGAGTTCATCTGCCTTATGAGTACA
CTGAGCATTCACTCGGCGCCCTCTCTCGGCATGGAGAAGCTCTGGGATAA
TTACGCACCGGCGGAGCGTGGGGAAGGCGCAGGCTGCGAGGAGGCTGGCG
GCAGCGCGACCTTCATGGTGGAAGACGGAGGTATAATATCCTACGCTGGC
ATTTTTTTGGACGATAAAGAGGACTCAGACGATGAAACGAGTGATTCGTC
AACAGACGCCGAAGTCGTGATGGCCCACCTGCACGCCGCGTTCGGCGGTG
TCGGGGCTCCTCAAGCGAACAGCATTTTTAACACCTCTTCTGGCTCTGGC
AGCACCAGCACAAGTGGCAGCACTGCCAGCATAGCTCCCGGATCTGATGG
TAAAGGAGAAGAATGATGAACGAGCAAACGCTGGACGAGCTCTTCAGACG
CGGACTTCTTATTACTTTGGAGGACAGGTTTGGAACCGAAGAGTCCTTTG
AATGGAAAGAACGAAAGTAGGGAAGAACGCGGTACTGGAAAGCTTGGAGG
ACTTCTTACAAACGGAGGGAGGCATTCCTGCTGCCGGGGCAGGGGCAAAC
CGTCGGTTCTCGTTCGACCTCTCCAATCTTGATATGCAGACGTTGGAGCA
ATTGGCAGCTGGCACGACTTCAGGTTCGTCCTCTCGCCGAGGTTCCTTCA
GCTTGACCCTGCTGGAGGCCGAAGGCTTCATGACCAAGTCGCCGCCGGCA
TCCTCAATGGCACCCTTATTGAGCAGCGGCGCCCGCTTCCATAGTGTGCC
TGATAATTTGCCTGCAGGGTTCAGTCATACGCAGGAAGGATGTAAGGAAC
ATGTAGTCTGTGACTGCAAAAAGACCCTGACCACCGCCCTGGGTGAGGAT
GGCGCCGGCCACTCGGTCCCGAACGCGAGTGTCTCCGCGAGCAAAAACAC
GGGTACTGGAGCGTCTTGCGCACTTGAACCGTTGACCAAGCCACAGGTGA
AGAAGGGGTTTGCGGCGGCGAGCACACCCACTGGGGAGTCCTCGCCTGAT
GCGCCGGCGGCAAGTGTCTCTGCAGCCTCCTTATTGCCCACGCCCCAAAC
GCCCCCTAAAATGCCGGATCCTGGGGATGGGCCTGACAACAAGACGGGTG
CGAACTCGAGCGGGACTGGCAGTACTGACAGCATGGGAACGTCGGGAACT
CCGAATGGGAACGGGGGGATGCTGGTGCTGCCGGTTATTCCTAAAGACGG
TGTTGCCCGCATCGGGATATACACCTTGGAGGAGCGAAAACTCCGTGTAG
CTCGATTTCAGGCAAAGCGTGGGCGGCGGATTTGGCGTAAAAAGATTAAA
TACGACTGTCGAAAGAAGCTAGCGGATAATCGCCCTCGAGTAAAGGGTCG
CTTTGTGCGGCGAGATGAGGAGATCGACATCATCGTGGGCGGCGCTGTGG
CGGCAGCTGAGGCAGCAGCTGCAGGTGGATCGGCCAACGGGAGTTCATCT
GCCTTATGAGTACACTGAGCATTCACTCGGCGCCCTCTCTCGGCATGGAG
AAGCTCTGGGATAATTACGCACCGGCGGAGCGTGGGGAAGGCGCAGGCTG
CGAGGAGGCTGGCGGCAGCGCGACCTTCATGGTGGAAGACGGAGGTATAA
TATCCTACGCTGGCATTTTTTTGGACGATAAAGAGGACTCAGACGATGAA
ACGAGTGATTCGTCAACAGACGCCGAAGTCGTGATGGCCCACCTGCACGC
CGCGTTCGGCGGTGTCGGGGCTCCTCAAGCGAACAGCATTTTTAACACCT
CTTCTGGCTCTGGCAGCACCAGCACAAGTGGCAGCACTGCCAGCATAGCT
CCCGGATCTGATGGTAAAGGAGAAGAATGATGAACGAGCAAACGCTGGAC
GAGCTCTTCAGACGCGGACTTCTTATTACTTTGGAGGACAGGTTTGGAAC
CGAAGAGTCCTTTGAATGGAAAGAACGAAAGTAGGGAAGAACGCGGTACT
GGAAAGCTTGGAGGACTTCTTACAAACGGAGGGAGGCATTCCTGCTGCCG
GGGCAGGGGCAAACCGTCGGTTCTCGTTCGACCTCTCCAATCTTGATATG
CAGACGTTGGAGCAATTGGCAGCTGGCACGACTTCAGGTTCGTCCTCTCG
CCGAGGTTCCTTCAGCTTGACCCTGCTGGAGGCCGAAGGCTTCATGACCA
AGTCGCCGCCGGCATCCTCAATGGCACCCTTATTGAGCAGCGGCGCCCGC
TTCCATAGTGTGCCTGATAATTTGCCTGCAGGGTTCAGTCATACGCAGGA
AGGATGTAAGGAACATGTAGTCTGTGACTGCAAAAAGACCCTGACCACCG
CCCTGGGTGAGGATGGCGCCGGCCACTCGGTCCCGAACGCGAGTGTCTCC
GCGAGCAAAAACACGGGTACTGGAGCGTCTTGCGCACTTGAACCGTTGAC
CAAGCCACAGGTGAAGAAGGGGTTTGCGGCGGCGAGCACACCCACTGGGG
AGTCCTCGCCTGATGCGCCGGCGGCAAGTGTCTCTGCAGCCTCCTTATTG
CCCACGCCCCAAACGCCCCCTAAAATGCCGGATCCTGGGGATGGGCCTGA
CAACAAGACGGGTGCGAACTCGAGCGGGACTGGCAGTACTGACAGCATGG
GAACGTCGGGAACTCCGAATGGGAACGGGGGGATGCTGGTGCTGCCGGTT
ATTCCTAAAGACGGTGTTGCCCGCATCGGGATATACACCTTGGAGGAGCG
AAAACTCCGTGTAGCTCGATTTCAGGCAAAGCGTGGGCGGCGGATTTGGC
GTAAAAAGATTAAATACGACTGTCGAAAGAAGCTAGCGGATAATCGCCCT
CGAGTAAAGGGTCGCTTTGTGCGGCGAGATGAGGAGATCGACATCATCGT
GGGCGGCGCTGTGGCGGCAGCTGAGGCAGCAGCTGCAGGTGGATCGGCCA
ACGGGAGTTCATCTGCCTTATGAGTACACTGAGCATTCACTCGGCGCCCT
CTCTCGGCATGGAGAAGCTCTGGGATAATTACGCACCGGCGGAGCGTGGG
GAAGGCGCAGGCTGCGAGGAGGCTGGCGGCAGCGCGACCTTCATGGTGGA
AGACGGAGGTATAATATCCTACGCTGGCATTTTTTTGGACGATAAAGAGG
ACTCAGACGATGAAACGAGTGATTCGTCAACAGACGCCGAAGTCGTGATG
GCCCACCTGCACGCCGCGTTCGGCGGTGTCGGGGCTCCTCAAGCGAACAG
CATTTTTAACACCTCTTCTGGCTCTGGCAGCACCAGCACAAGTGGCAGCA
CTGCCAGCATAGCTCCCGGATCTGATGGTAAAGGAGAAGAAT back to top
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