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Properties
| Property Name | Value |
|---|
| Product | abc subfamily abcg |
| Orig transcript id | gnl|cribi|Naga_100055g35.7352.mrna |
| Orig protein id | gnl|cribi|Naga_100055g35.7352 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:384270..387415 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6019 ID=rna6019|Name=rna6019|organism=Nannochloropsis gaditana|type=mRNA|length=2359bp
ATAGAAAGGTGTCTCCCAAAATTACAGGACATATGACGGAATCCAAGCGC
AATGCTGGCTCCGGAGGAGGGGGCATTCGCATGCTTAACATTCTGGACCG
CCCACTTGCCACGAAGGGCCGCGGAGTAGGAGGCTCCGAAGTAAGCCTAA
GCGCATTCAGCTTCCTATTTTCAGAGATGGTTCAATACTACCAAAATCGT
GTCTTGAGCATTGCGGACTTGGAGCGCAAACTGGAGGAAGCTGGCTATGG
TGTAGGCCATCGAGTGCTCGAGCTCTTAGCTTTCCGTGAGAAGCAATACC
GACGCGAGATAAAGCTGATCGGAGTATTACAGTTTGTATCGTCAACGGTG
TGGAAAGCTCTTTTCAATAAGGTGGCCGACTCCCTCGAGCGCTCGACTGA
AAATGAGGATGAATACATGATACACGAACGAGAGCCCATAACTAATGTGT
TCGTATCGGCTCCTGCGGATATCAGTCAGCTGAATTGCGCTGCCTACATC
GCGGGCATAATATCGGGTGTTCTGAATGGCGCTTCATATCCCGCCGGTGT
AACAGCACATCATGTAGCTATTGGTGATGGGCAGCGGGAGAAGACTGTGT
TCCTCATCAAGTTTCGACAAGACGTCTTGCGCAGGGAGGCTGCCTTGTCC
GGGTAACGTATTGTCGCCCGATTGATAGTTTTAAAAAAGAATGACAACGA
GCTTTTGCACGATAGCTACGCATCAAGTAGGACCCTCGTCTGTATAATTA
TTATATGTGCGCTTTCTATTTCATCTTCTGTGCAAATTATGTTTTTCCCT
TCCTCCAGCAAGGACCATTTGGCGTTCGAGCATTGAGATATGAGATATCT
AAACATTGATTCTTTTTTGAAATCCGTTCCACCCCGACGAATAAATTCCT
AGAGTTTCTCATCGGCTCCTTTTCACATTGACCAAAATAACTCGCCCGAG
TCATATTTTCTGAAGTATTACACTGCATGGTGGTGATTCTTATCATGAGA
ATGAGCGTAGTCTTTTTGCGCATCTGCCTCCTCTGCATCCCAGGCGTTGT
AATATCCATTCCAACGGTCAAACGCTGTGGACTCCCCTTTTCGGAGTTAC
TTTTACGTTCGGAGCTGCCGTTGCAGGCTGCACACAAGCGTGGCAGTAAC
CCTCCCCATTACCATCAATTTTTACGAAGTCTGTGGAAGCCGTACATTTG
AGGTGACCGTTGTTGAAGATGTCATAGCCCAGTGGTGCCTGATTGTCCTG
AAATCGAGAACAAAGAATCCACATGGCCTCTGAGTTAAAAATGGCACCCC
CCTTGGCCGATGCCTCATTAGCATAGAAAGTGGAGTCGCGCACCAAGAAA
CGGCCTCGATGATTGTTGTAAATTGCGCCACCCAAACGTGCATGATTCCG
AGAAAAGTGGCTATCATCCACGTCCGTTCGCGAGCCGGCATTGAAGATAG
CACCTCCCGAATCGGCTTGGTTGCGGGTGAACAAAACCTGATTGAAGTGG
ACTCGTGAGATACGACGTCCGCCCTTCTTGTGCTTCTTATCCTCATTTTT
TCCATGCATATTTTCCTCATTAAAGGTGTCCAGATCATCAACACCAGAGG
CCGAAGCGCTGATATCCTTCCCATGCTCGTGATGAATTTTCTTCTTATTT
CCCTCCCAACGATCCTCCTCGATCGCAACGGCCCCACCCTTGCGGTCGGC
TGTATTGTGGTCAAAACTTACGTAATTAAACTCTAGCCATCGGGCATTCT
CGGCATAAAGCGCTCCACCGACCCAAGCGATATTGTTTTTGAAATGTACG
TCATCAAATTTGCCCGTGGCACGATTCACGAAGAGCATAGAACCACCGTA
AAATCCCTCAACTTCACAGCCACCGTCGACGAAGGTCAGGTCACAGGCTT
TGAGAATGGCGTAGTCATCAAAGATAAAGTGGCGTCTTTTAGGGGCAGCG
TGGATAACGACTTTTTGGTTATTAGGAATACCATTGTTACCATTTTGGTG
CTCAAGATTACTGTAGTCTGTTTTATGATGCTTGTCATTATTGGGCACGC
CACTTATCTCCAATTTAAAGCCGTCCGAGAAAATGAAGTCGCGATCAAGG
TGGTAGTCTCCAGGTTGTACGATATATATACGACCGAAGAAGGTTTCGCG
CTCCTTGTCCTTGTTGTGCCTATTTTTCTTGTTCCGTCTGCTTGCAGTAG
CCTCAACCTTGGTGTGCTTGCTCTCTTGTCCCTCGTCAACCCACCACCGA
TTCTCTTCGCTGCGATACCAGGTTTGGCTCTCGTGCTCTAAAATAGCAAG
AGCTCGATTGAGTTCTTTGGAATCTCGCACGTAAAAAGGACTGTGGCGGG
TCTCAATGA back to topprotein sequence of rna6019 >rna6019-protein ID=rna6019-protein|Name=rna6019|organism=Nannochloropsis gaditana|type=polypeptide|length=537bp
MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELL
FGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGG
TDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFG
TLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIR
YFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDM
VRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWG
LVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPL
DWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSD
IGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFS
GILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVE
LNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG back to topmRNA from alignment at CM002467.1:384270..387415- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6019 ID=rna6019|Name=rna6019|organism=Nannochloropsis gaditana|type=mRNA|length=3146bp|location=Sequence derived from alignment at CM002467.1:384270..387415- (Nannochloropsis gaditana)
GCTGCATACCAAGTCCCTGCGAACACATCCTCACGATTCGTATTATTTTT
GTTATTTATCTTTTGTGCGATGCTTTAATCTTTCTTTGCTTTCTTTCTTC
CTTCCAAATTATGACATGGCTCGCAATGGTTCATATAATACTCTTCGTCT
TTCGAAGCCAGAAGGTCTTCGTCGCATCCCCCTGGCCCTCCACTTTCTTT
GAAGGGAACTCAGCAAACTGTCATTCGTACGAATTAATGTGGCAGTGTTC
AGTCCGTGATTAAAGTAATTATGAAACCTCACCATAAATAGATGGCAGGC
CTTGAACTCAAGACTGCGGTAAATGTCACTGGACCTCAACTGTCAATGGA
CAAGGACTCGTCGCTGCCTTTGGCAAAGACCAAAAGCCATGGTGACAGGA
AATATTCCATCGACATGGGGGTGCACCATTCTCTCGAGTGGAACGTGACC
AGCTATGAAGTTGGCAGTGGCAAAGGAAAGAAAAGCATTCTCAACCTTAT
TGGTAAGTGTGTTTTGAGTTTCCAGCCATTCTTTGCTCTAGTTCCCCCGA
TGGAAACTCCTTTCTATGACAAGTGTCCATCTATTCTTATCCTGTAAATA
ATAAGCATCCTTTTTGACAACCCGTCTTCCATTTAATCGACCAATTTCTG
TCGACTTCCTAAAGCCGGAAAGACTCGCAGTGGCGAGCTGACGGCAATTA
TGGGGCCCTCCGGTGCAGGAAAGACCACACTTCTGGAATGTATTTCGCTT
CGAAATCGAAAATTTGAAGGCGCCGTGCACTACGACAATCGAGGGCCAAC
AGGCGAGTTTTTCACCTGCTCCGTTCTTGTCCACCAGAAAGAGCTCCTGT
TCGGGTTCATGACCCCGAGAGAGCATCTTCTCTTTCATGCTATTGCACGA
ATGAGTAAGAACCATACGATCGAGCAGATCAATGCCCGTGTGGAGGAAGT
CTTACAGGAAGTTAAACTCGAGAAATGCGCTGACACCATCGTGGGCGGCA
CGGACCCCATCTACATGCGCAAGGGACTCTCAGGAGGGGAACGAAAGCGA
CTCTCCATCGCCGCCGAGTTGCTGCTTGCCCCGCAACTAATTTTTTTGGA
TGAGCCCTCTTCTGGCCTTGACTCTGTCATGTCTGAATCGGTATGTACAA
GGCAGACCTCGAGGATGGCAATTGTTCGCGAAAGTATAACTCTATGCTAA
AAATGCAATTCCTATCACCAATATTATAGATATTCGGCACGTTAAAGGAC
CTCACTCAATCAGGCCGCATTGTCGTTGCCTCCGTCCATTGTCCTTCTTC
AGAGATGTGCCAGCAATTCACACACGTACTTCTGCTAACATTCGACGGTC
GCCTTGCTTACCATGGGCGTCAAGATGCTGCCATTCGCTATTTCTCCTCC
TTGAGCTACCAATGTCCCGAGAACTATAACCCCTCCGATTTCTACCTTAA
GCTCATTTCTGCGACACCTGGTGCAGATCCTGCGCAGGAAAAAGCGCGCA
TGAACCAACTTGTAGCCGCGTACAACGCATCAGATATGGTTCGGAAGACG
CCGCTGGCCCCGGACGAGACTCACAAACAATTTCAGATGGTGTTCGGCCA
TGCTAGTAGCTGGACACTTTTCAAGATAAACCTTTGGCGGGCCTTTATCC
AGCTGCAGCGGGATTGGGTCACATTTGTGCTCTGGGGTTTGGTCTCTGCC
CTTGTCGGTGGGCTTTTCGGCATCCTGTATTGGCAGCAGGCCCGCAGCAA
TTGGCGAAATCTTTTAGGGCTCCTCTTTTCTGTCGTTGTGGCGAACCTCT
TTACTTCCTCTTTGGCAGTTATGATGCGTTTTCCGCTCGACTGGGCGATT
GTTGTCCGAGAATATTTTTCAGGCTCAAACGCGATTGGTCCTTACCTGGT
GGCGCGCTTCATCGTGGATGCACCAATGGGATACGGGCCGTTCCTGCTTA
TCACACTTCTCTACTGGATGACAGGTATGGACTCGGACATCGGCAAGTTT
GTGATTTTCGCTTTGACATTTATTTCCGGTAACTGGGCGTCCACCTCCAT
GGGTCAATACGTCTCGTCCTTTTCGGCCAATCCATTCATTGGTCTTACCA
TCCTTCCCGCCTTTGTCGCGCCAATGATCATGTTCTCTGGTATCCTTTAT
GAGCGCTCTTCTGTTCCTGCTTGGTTGAGCTGGCTACAGACACTGTCAAT
TGTAAATTATTCTTTCTCAGCGCTAATGATCCAGCAGATCCACATCCTCC
CCAAGCCTCTGGCTCTTCTTGTGATGCAATTTGTGGAGCTGAATCCCGAT
ACCATGGGCTGGGACATTGGTATGCTTTGGATAATGAACTTCGGTTTTCA
GATCCTTACATACATAAATCTCTCTCTTCGTCTTCGTTTTGCAACTGGAT
AAGACAAGATGTATTATCTTCAAGCAGATCGAAAAAGATAAATGGGTGCG
AAACATGTGAAAGGAACCATCAAGGGTATGCACCACCAAAAAAAGGAAGT
TCTTTTTATCGACTTGCGCGTATGATAAAATGACCTGCGGCTCGAAATGT
ACTGATAGACAGGTGTAAGACAGGAGACAAATGGGAAAAGGTGTACTAAA
AGGCATGTGATATCCATTTCACAAATGAGCTAATACAACATTCAGTACAA
GAAGAACCTTGGCTTGAAACAGTGTAGGAGAAGATGTGGGACCAAATTGC
AAGTAGCGCGGTAAGATCAACAAGTGAACAATGTTTACATGATGGTCACT
GATTAAGGGCCCAACAGCCGTGAGAAAGATGGAACGAAGTGTCTGGCGTC
GAACGTTAGTTCTGCCTTCGACTTAGATAAAATTTTGGTTCGTCAGCGCA
GACCATGCTCTCAGAAGAGAAGTAGTGAGAAGGCGGATTTGAGCACATAC
TTTGGCGTCGACAATACAATGTGCTGAAAATTCGCAAAGAAAATGTCGAC
AAGTTGTCAAACAAAGTAGAAGCGCACCGAGTTTGCCGGTTTTGGTGAAA
AACCGTTACTAGCAGCAACTGGAACATGGCGATATTTTAATCATTTTTTC
ATTGTAAAAATCCAGATTACATATCAGGCACCCGACCATGCGAGTCTTAG
GTAGTGCTGTTCAATAAGGTCTGCATTGTGTGACAAGGCATAAAAT back to topCoding sequence (CDS) from alignment at CM002467.1:384270..387415- >rna6019 ID=rna6019|Name=rna6019|organism=Nannochloropsis gaditana|type=CDS|length=3228bp|location=Sequence derived from alignment at CM002467.1:384270..387415- (Nannochloropsis gaditana)
ATATTCGGCACGTTAAAGGACCTCACTCAATCAGGCCGCATTGTCGTTGC
CTCCGTCCATTGTCCTTCTTCAGAGATGTGCCAGCAATTCACACACGTAC
TTCTGCTAACATTCGACGGTCGCCTTGCTTACCATGGGCGTCAAGATGCT
GCCATTCGCTATTTCTCCTCCTTGAGCTACCAATGTCCCGAGAACTATAA
CCCCTCCGATTTCTACCTTAAGCTCATTTCTGCGACACCTGGTGCAGATC
CTGCGCAGGAAAAAGCGCGCATGAACCAACTTGTAGCCGCGTACAACGCA
TCAGATATGGTTCGGAAGACGCCGCTGGCCCCGGACGAGACTCACAAACA
ATTTCAGATGGTGTTCGGCCATGCTAGTAGCTGGACACTTTTCAAGATAA
ACCTTTGGCGGGCCTTTATCCAGCTGCAGCGGGATTGGGTCACATTTGTG
CTCTGGGGTTTGGTCTCTGCCCTTGTCGGTGGGCTTTTCGGCATCCTGTA
TTGGCAGCAGGCCCGCAGCAATTGGCGAAATCTTTTAGGGCTCCTCTTTT
CTGTCGTTGTGGCGAACCTCTTTACTTCCTCTTTGGCAGTTATGATGCGT
TTTCCGCTCGACTGGGCGATTGTTGTCCGAGAATATTTTTCAGGCTCAAA
CGCGATTGGTCCTTACCTGGTGGCGCGCTTCATCGTGGATGCACCAATGG
GATACGGGCCGTTCCTGCTTATCACACTTCTCTACTGGATGACAGGTATG
GACTCGGACATCGGCAAGTTTGTGATTTTCGCTTTGACATTTATTTCCGG
TAACTGGGCGTCCACCTCCATGGGTCAATACGTCTCGTCCTTTTCGGCCA
ATCCATTCATTGGTCTTACCATCCTTCCCGCCTTTGTCGCGCCAATGATC
ATGTTCTCTGGTATCCTTTATGAGCGCTCTTCTGTTCCTGCTTGGTTGAG
CTGGCTACAGACACTGTCAATTGTAAATTATTCTTTCTCAGCGCTAATGA
TCCAGCAGATCCACATCCTCCCCAAGCCTCTGGCTCTTCTTGTGATGCAA
TTTGTGGAGCTGAATCCCGATACCATGGGCTGGGACATTGGTATGCTTTG
GATAATGAACTTCGGTTTTCAGATCCTTACATACATAAATCTCTCTCTTC
GTCTTCGTTTTGCAACTGGATAAATGGGGCCCTCCGGTGCAGGAAAGACC
ACACTTCTGGAATGTATTTCGCTTCGAAATCGAAAATTTGAAGGCGCCGT
GCACTACGACAATCGAGGGCCAACAGGCGAGTTTTTCACCTGCTCCGTTC
TTGTCCACCAGAAAGAGCTCCTGTTCGGGTTCATGACCCCGAGAGAGCAT
CTTCTCTTTCATGCTATTGCACGAATGAGTAAGAACCATACGATCGAGCA
GATCAATGCCCGTGTGGAGGAAGTCTTACAGGAAGTTAAACTCGAGAAAT
GCGCTGACACCATCGTGGGCGGCACGGACCCCATCTACATGCGCAAGGGA
CTCTCAGGAGGGGAACGAAAGCGACTCTCCATCGCCGCCGAGTTGCTGCT
TGCCCCGCAACTAATTTTTTTGGATGAGCCCTCTTCTGGCCTTGACTCTG
TCATGTCTGAATCGATATTCGGCACGTTAAAGGACCTCACTCAATCAGGC
CGCATTGTCGTTGCCTCCGTCCATTGTCCTTCTTCAGAGATGTGCCAGCA
ATTCACACACGTACTTCTGCTAACATTCGACGGTCGCCTTGCTTACCATG
GGCGTCAAGATGCTGCCATTCGCTATTTCTCCTCCTTGAGCTACCAATGT
CCCGAGAACTATAACCCCTCCGATTTCTACCTTAAGCTCATTTCTGCGAC
ACCTGGTGCAGATCCTGCGCAGGAAAAAGCGCGCATGAACCAACTTGTAG
CCGCGTACAACGCATCAGATATGGTTCGGAAGACGCCGCTGGCCCCGGAC
GAGACTCACAAACAATTTCAGATGGTGTTCGGCCATGCTAGTAGCTGGAC
ACTTTTCAAGATAAACCTTTGGCGGGCCTTTATCCAGCTGCAGCGGGATT
GGGTCACATTTGTGCTCTGGGGTTTGGTCTCTGCCCTTGTCGGTGGGCTT
TTCGGCATCCTGTATTGGCAGCAGGCCCGCAGCAATTGGCGAAATCTTTT
AGGGCTCCTCTTTTCTGTCGTTGTGGCGAACCTCTTTACTTCCTCTTTGG
CAGTTATGATGCGTTTTCCGCTCGACTGGGCGATTGTTGTCCGAGAATAT
TTTTCAGGCTCAAACGCGATTGGTCCTTACCTGGTGGCGCGCTTCATCGT
GGATGCACCAATGGGATACGGGCCGTTCCTGCTTATCACACTTCTCTACT
GGATGACAGGTATGGACTCGGACATCGGCAAGTTTGTGATTTTCGCTTTG
ACATTTATTTCCGGTAACTGGGCGTCCACCTCCATGGGTCAATACGTCTC
GTCCTTTTCGGCCAATCCATTCATTGGTCTTACCATCCTTCCCGCCTTTG
TCGCGCCAATGATCATGTTCTCTGGTATCCTTTATGAGCGCTCTTCTGTT
CCTGCTTGGTTGAGCTGGCTACAGACACTGTCAATTGTAAATTATTCTTT
CTCAGCGCTAATGATCCAGCAGATCCACATCCTCCCCAAGCCTCTGGCTC
TTCTTGTGATGCAATTTGTGGAGCTGAATCCCGATACCATGGGCTGGGAC
ATTGGTATGCTTTGGATAATGAACTTCGGTTTTCAGATCCTTACATACAT
AAATCTCTCTCTTCGTCTTCGTTTTGCAACTGGATAAATGGGGCCCTCCG
GTGCAGGAAAGACCACACTTCTGGAATGTATTTCGCTTCGAAATCGAAAA
TTTGAAGGCGCCGTGCACTACGACAATCGAGGGCCAACAGGCGAGTTTTT
CACCTGCTCCGTTCTTGTCCACCAGAAAGAGCTCCTGTTCGGGTTCATGA
CCCCGAGAGAGCATCTTCTCTTTCATGCTATTGCACGAATGAGTAAGAAC
CATACGATCGAGCAGATCAATGCCCGTGTGGAGGAAGTCTTACAGGAAGT
TAAACTCGAGAAATGCGCTGACACCATCGTGGGCGGCACGGACCCCATCT
ACATGCGCAAGGGACTCTCAGGAGGGGAACGAAAGCGACTCTCCATCGCC
GCCGAGTTGCTGCTTGCCCCGCAACTAATTTTTTTGGATGAGCCCTCTTC
TGGCCTTGACTCTGTCATGTCTGAATCG back to top
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