EWM24668.1, cds6004 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 1108.59 bits (2866), Expect = 0.000e+0 Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG 537
MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG
Sbjct: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG 537
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 331/537 (61.64%), Postives = 416/537 (77.47%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFG-HASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFAT 536
MGPSG GKTTLLECISLRNR+F+GAVH+D R P G+ FT SVLVHQKELLFGFMTPRE+L FH +ARM HT QI+ R++EVL ++KLEKCADT+VGGTDP + +KGLSGGERKRL+IA E+LLAP +IFLDEPSSGLDSVMSESIF +LKDL GRIV+ASVHCPSSE CQ F+H++LLT+DGR+AYHG I YFS+L Y CPE+YNP+DFYLKLIS TPGA+ E RM+ L A+ SDM PL D H+ V G AS++T K+N WRA ++L+RD VLWG++S +VG L GI+Y QQA ++WRNLLGLLFS+VVA++F SL V+MRFP +WAI+VRE +SG NA+GPYL A F PM YGPFLL+T++YWMTGMD + ++ FA ++S + A +GQ+VSS S NP +G+TILPAFVAPMIMFSG+LY++S+VP WLSW+ +S++NYSFSALM +QIHILP+ A L+ F++LN ++ G ++ LWIM+ +LTY L++RLR AT
Sbjct: 63 MGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNAT 599
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0 Identity = 316/561 (56.33%), Postives = 406/561 (72.37%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS--------------------------KNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLR 533
+GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S VHQ ++L+GF+TPREHL FHAIARMS + + E + RVEEV+ VKLEKCADT++GG+DP++ KG+SGGERKRL+IA ELL ++IFLDEPSSGLDSVMSESIF TLKDLT GRIV+A+VHCPSS+ F++++LLT DGRLAY G A+ YF ++L +CP++YNP+DF L+L+SA PG +E RM+ L AY S M + PL D+ HK V G AS W FK+NLWR +QL RD +T +LW VSAL+G LFG+LYWQ A SNWRNL+GL+FS VV N+FT L V+MRFP++W +VVRE+ SG+NA+GPY++ARF P+ YGP L+ +++YW TGMD D G ++IF L F+S NW+ S+GQ++SSFSANP + +TI+P FV PMIMFSG+L ERSSVP WL+W++ +S+VNY+F LM QQ+HILP +V QF++ NP MGW++GMLWI+ FQ+LTY+NL +RLR
Sbjct: 78 LGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0 Identity = 316/561 (56.33%), Postives = 406/561 (72.37%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS--------------------------KNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLR 533
+GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S VHQ ++L+GF+TPREHL FHAIARMS + + E + RVEEV+ VKLEKCADT++GG+DP++ KG+SGGERKRL+IA ELL ++IFLDEPSSGLDSVMSESIF TLKDLT GRIV+A+VHCPSS+ F++++LLT DGRLAY G A+ YF ++L +CP++YNP+DF L+L+SA PG +E RM+ L AY S M + PL D+ HK V G AS W FK+NLWR +QL RD +T +LW VSAL+G LFG+LYWQ A SNWRNL+GL+FS VV N+FT L V+MRFP++W +VVRE+ SG+NA+GPY++ARF P+ YGP L+ +++YW TGMD D G ++IF L F+S NW+ S+GQ++SSFSANP + +TI+P FV PMIMFSG+L ERSSVP WL+W++ +S+VNY+F LM QQ+HILP +V QF++ NP MGW++GMLWI+ FQ+LTY+NL +RLR
Sbjct: 78 LGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 484.567 bits (1246), Expect = 3.230e-162 Identity = 258/550 (46.91%), Postives = 368/550 (66.91%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVV-ASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSS-LSYQCPENYNPSDFYLKLISATPG--ADPAQEKARMNQ-LVAAYNASDM---------VRKTPLAPDETHKQFQMVFG-HASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFA 535
MG SGAGKTTLLEC++LR+R+F+G V ++ G++FT S LVHQ+E+L GF+T EHLLFH ARMS + ++I ARV V+++V L KC T+VGG +KGLSGGERKRL+IA ELLL PQ IFLDEP++ LDSVM+ + L+ L S RI+V A++H PSS++ F+HVLLLT DGRLA+HG A+ Y SS L P+ YNP+D ++L+ + PG A +E+ + N LV ++ AS + + +H+ + V G HAS+WTLF++NL R +Q R+ ++F L+G+V ++G FG LY+QQA S+WRNL+GLL+++VVA L+ L V++R PLDW +++REYF+G+NA GPYL+A+ + + P YGP LL+ LYWMTG+ + F+ FA AS +M V S SANP + L ILPAF+ PM++FSG LY+ +++P++L+WL +SIVNY F+AL+ Q +LP L + ++FV ++P+ +G ++ ML M F LTY+ L+LRLR A
Sbjct: 86 MGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 473.011 bits (1216), Expect = 8.531e-158 Identity = 248/548 (45.26%), Postives = 350/548 (63.87%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSG-----RIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVF---GHASSWTL-FKINLWRAFIQLQRDWVTFVLWGLVSALV--GGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPK-PLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFAT 536
MGPSGAGKTTL++CI+LR R FEGA+H D R P ++FT + VHQKEL F +T REHL+FHAI R+ +T +Q RV+EV+ EV+L +CADTI+GG + + KGLSGGERKRLSI ELL P++IFLDEP+SGLDSVM E + L L R+++ +H PSS M F+HVLLL G +AYHG ++A YF SL Y P NYNP+DF L+++SA PGA + + + + A M + L P+ H F V G + + L K+N+WRA Q RD T L+ LV L+ G +FG+L+ QA S+WRNL+G++F++VVA L S+ V ++FP++W+I +REY++G+NA+GPY + R I D P LL+ + YWM+G+ + F+ + F S S G SSFSA+P +GL I P PMI+FSG+LYERSSVP +L W+Q +S+VNY F+AL+I + + L P+ LV+ F++++ G IG L+ + G++ +++ L LR+R+AT
Sbjct: 84 MGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGE-FALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGA---EVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGT--LYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYAT 625
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 397.897 bits (1021), Expect = 7.145e-128 Identity = 221/541 (40.85%), Postives = 331/541 (61.18%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSG--RIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISA--------TPGADPAQEKAR--------------MNQLVAAYNASDMVRKTPLAPDETHKQFQMVFG-HASSWTL-FKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQ-ARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVEL-NPDTMGWDIGML 513
MGPSG GKT+LL+C++LR R FEG++ + + TG +F + VHQKEL F +T REHL+FHA+ +S++ ++E+ ARVE V++EV L K D +GG D +Y+ G+SGGERKRL+IA ELL P+++ LDEP+SGLDSVM E + LK + R+V+A++H PSS + +HV LLT G LAY G +D + + L Y+CP +NP+DF L+L SA PG QE A +LVAA ++ PL + HK+ V G AS+W + F+ NLWR+++ +R++V + L++ +G +FG+LY+QQ N RN G LFS++V L SS+AV M FP D+AI++REY++G N+ Y + R + P ++ L Y+M G+ F + L F N+A+ S+G SSFSANP +GL+ILP F+ PMI+FSG+LYER+SVP L W+Q +S++NYSF+ +++ Q+ + P ++ F+++ + D G+ I ++
Sbjct: 111 MGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALV 650
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana]) HSP 1 Score: 325.479 bits (833), Expect = 2.248e-100 Identity = 184/552 (33.33%), Postives = 307/552 (55.62%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKT--------PLAPDETHKQFQMVFGH--ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARS--NWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMG-YGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIH----------ILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLS 529
MG SGAGK++LL+CISLRN+KFEG V D + FF + V+Q +L F +T REHL FHA+ RM K RVE +L +V L+ C+D ++GG + +G+SGGERKR+++A ELL P ++FLDEP+SGLDS M+E++ L+ L +G+IVV +H PSS+ + FTH+ LL GR+AY G A+ YF++L + CP N+NP+DF+++ ++ P +D + AR+ + AY SD+ ++ P + ++ + A++ T F + R +Q +R+ V + S L+G L G++Y+ Q + +N +G+ F V + +++ V+ P D+A+ +REY +G+N + Y +AR + + P P + +++Y M G+ G ++ F L I + SMG +S+ N + + PM +FSG+L + ++ WL LQ LSI+ Y++ A++I + I P V+ +V PD + +++GML++ F+++ ++ L
Sbjct: 86 MGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAERVESILLDVGLQGCSDALIGGASSLI--RGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLLA-KGRMAYLGELPKAVDYFAALGHACPPNFNPADFFIEELAVVP-SDYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVDPAVLSKPRRRTGIAITEYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFDQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPINCGFNVICPFRTGNAVLTYVGAAPDELSFNMGMLFVFMLCFRLVAFMALK 633
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 315.464 bits (807), Expect = 1.089e-95 Identity = 188/556 (33.81%), Postives = 304/556 (54.68%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYN-----ASDMVRKTPLAPDE----THKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGL-FGILYWQQ--ARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMG-YGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALL------------VMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLR 531
MG SGAGK+T L+C+SLRN++F G V+ + + +++ + V+Q++L MT REHL FHA+ RM+ + +E+ RVE+VL EV + C +TI+GG Y +G+SGGE+KRL+ ELL P ++F DEP+SGLDS M+ + T+++L G+I++ +H PSS+ FTH+LLL GR+ Y+G YFSSL CP +NP+DF++ IS P A AR+ L AY A +M K + P E HK M HAS+WT F + R IQ + T V +++LV G+ G +Y+ Q + + +N++GL F +++ S V+ FP + + +RE SG+N + Y +AR + + P P + ++Y M + G+F + T I +TS+G +SS +++ + + P F+ PM +F+G+L + +++P WL WL SI+ Y + L+I Q + L+ + VM +V +P +G +G+L + F++L + L+ +
Sbjct: 165 MGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGGPGTGY--RGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLLA-KGRIVYNGPMATLQSYFSSLGVICPHFHNPADFFINQISIVPTEQEA-SMARLQSLWDAYENSNLAAGNMAWKAEM-PAEILNLKHKAVSMKHFHASTWTQFYYTMKRN-IQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQ--YTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAFFFLTRK 712
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana]) HSP 1 Score: 300.442 bits (768), Expect = 2.951e-90 Identity = 183/552 (33.15%), Postives = 300/552 (54.35%), Query Frame = 0
Query: 1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSS-LSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTP--LAPDETHKQFQMVFGH--------ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQA--RSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGY-GPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQI---HILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFA 535
MG SGAGK++LL+CISLRN +FEG V+ D FF+ S VHQ +L F +T REHL FHA+ R+ + I RVEEV+ V L K AD+++GG P +G+SGGERKRLS+A ELL P++IF DEP+SGLD+ M+ S+ LK L SGR+V +H PSSE+ + FTH++LL G+ AY G + + YF+S L +CP+ YNP+D+ ++ ++ + + + + ++ Y +S++ R +A E M A+SWT F + R R+ V + + +G + G++Y QQ S +N LG +F +++ S V P D A+ +REY + +N Y + + + P P + ++ YW+ G + +F IF +T + AS S+G +S+ + + + + + P + PM +++G+L+ VP + L +S++ Y+F A+++ + P+ L V +++ + +G+ I ML ++ FGF+ L Y+ L +R + A
Sbjct: 138 MGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGG--PQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLA-RGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLE--KPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQ-LRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRA 683 The following BLAST results are available for this feature:
BLAST of EWM24668.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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