EWM24668.1, cds6004 (CDS) Nannochloropsis gaditana

Overview
NameEWM24668.1
Unique Namecds6004
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:386276..386716 -
Alignment locationCM002467.1:385014..386186 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24668.1
Productabc subfamily abcg
Orig transcript idgnl|cribi|Naga_100055g35.7352.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:386276..386716 -
CM002467.1supercontigCM002467.1:385014..386186 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
IPR013525ABC_2_trans
IPR003439ABC_transporter-like
Homology
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 1108.59 bits (2866), Expect = 0.000e+0
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG 537
            MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG
Sbjct:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFATG 537          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0
Identity = 331/537 (61.64%), Postives = 416/537 (77.47%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFG-HASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFAT 536
            MGPSG GKTTLLECISLRNR+F+GAVH+D R P G+ FT SVLVHQKELLFGFMTPRE+L FH +ARM   HT  QI+ R++EVL ++KLEKCADT+VGGTDP + +KGLSGGERKRL+IA E+LLAP +IFLDEPSSGLDSVMSESIF +LKDL   GRIV+ASVHCPSSE CQ F+H++LLT+DGR+AYHG     I YFS+L Y CPE+YNP+DFYLKLIS TPGA+   E  RM+ L  A+  SDM    PL  D  H+    V G  AS++T  K+N WRA ++L+RD    VLWG++S +VG L GI+Y QQA ++WRNLLGLLFS+VVA++F  SL V+MRFP +WAI+VRE +SG NA+GPYL A F    PM YGPFLL+T++YWMTGMD +   ++ FA  ++S + A   +GQ+VSS S NP +G+TILPAFVAPMIMFSG+LY++S+VP WLSW+  +S++NYSFSALM +QIHILP+  A L+  F++LN ++ G ++  LWIM+    +LTY  L++RLR AT
Sbjct:   63 MGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNAT 599          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 316/561 (56.33%), Postives = 406/561 (72.37%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS--------------------------KNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLR 533
            +GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S  VHQ ++L+GF+TPREHL FHAIARMS                          +  + E +  RVEEV+  VKLEKCADT++GG+DP++  KG+SGGERKRL+IA ELL   ++IFLDEPSSGLDSVMSESIF TLKDLT  GRIV+A+VHCPSS+    F++++LLT DGRLAY G    A+ YF ++L  +CP++YNP+DF L+L+SA PG    +E  RM+ L  AY  S M  + PL  D+ HK    V G  AS W  FK+NLWR  +QL RD +T +LW  VSAL+G LFG+LYWQ A SNWRNL+GL+FS VV N+FT  L V+MRFP++W +VVRE+ SG+NA+GPY++ARF    P+ YGP L+ +++YW TGMD D G ++IF L F+S NW+  S+GQ++SSFSANP + +TI+P FV PMIMFSG+L ERSSVP WL+W++ +S+VNY+F  LM QQ+HILP     +V QF++ NP  MGW++GMLWI+   FQ+LTY+NL +RLR
Sbjct:   78 LGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 316/561 (56.33%), Postives = 406/561 (72.37%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS--------------------------KNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLR 533
            +GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S  VHQ ++L+GF+TPREHL FHAIARMS                          +  + E +  RVEEV+  VKLEKCADT++GG+DP++  KG+SGGERKRL+IA ELL   ++IFLDEPSSGLDSVMSESIF TLKDLT  GRIV+A+VHCPSS+    F++++LLT DGRLAY G    A+ YF ++L  +CP++YNP+DF L+L+SA PG    +E  RM+ L  AY  S M  + PL  D+ HK    V G  AS W  FK+NLWR  +QL RD +T +LW  VSAL+G LFG+LYWQ A SNWRNL+GL+FS VV N+FT  L V+MRFP++W +VVRE+ SG+NA+GPY++ARF    P+ YGP L+ +++YW TGMD D G ++IF L F+S NW+  S+GQ++SSFSANP + +TI+P FV PMIMFSG+L ERSSVP WL+W++ +S+VNY+F  LM QQ+HILP     +V QF++ NP  MGW++GMLWI+   FQ+LTY+NL +RLR
Sbjct:   78 LGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 484.567 bits (1246), Expect = 3.230e-162
Identity = 258/550 (46.91%), Postives = 368/550 (66.91%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVV-ASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSS-LSYQCPENYNPSDFYLKLISATPG--ADPAQEKARMNQ-LVAAYNASDM---------VRKTPLAPDETHKQFQMVFG-HASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFA 535
            MG SGAGKTTLLEC++LR+R+F+G V ++     G++FT S LVHQ+E+L GF+T  EHLLFH  ARMS   + ++I ARV  V+++V L KC  T+VGG      +KGLSGGERKRL+IA ELLL PQ IFLDEP++ LDSVM+  +   L+ L  S RI+V A++H PSS++   F+HVLLLT DGRLA+HG    A+ Y SS L    P+ YNP+D  ++L+ + PG  A   +E+ + N  LV ++ AS             +     + +H+  + V G HAS+WTLF++NL R  +Q  R+ ++F L+G+V  ++G  FG LY+QQA S+WRNL+GLL+++VVA L+   L V++R PLDW +++REYF+G+NA GPYL+A+ + + P  YGP LL+  LYWMTG+   +  F+ FA        AS +M   V S SANP + L ILPAF+ PM++FSG LY+ +++P++L+WL  +SIVNY F+AL+  Q  +LP  L  + ++FV ++P+ +G ++ ML  M   F  LTY+ L+LRLR A
Sbjct:   86 MGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 473.011 bits (1216), Expect = 8.531e-158
Identity = 248/548 (45.26%), Postives = 350/548 (63.87%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSG-----RIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVF---GHASSWTL-FKINLWRAFIQLQRDWVTFVLWGLVSALV--GGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPK-PLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFAT 536
            MGPSGAGKTTL++CI+LR R FEGA+H D R P  ++FT +  VHQKEL F  +T REHL+FHAI R+   +T +Q   RV+EV+ EV+L +CADTI+GG +   + KGLSGGERKRLSI  ELL  P++IFLDEP+SGLDSVM E +   L  L         R+++  +H PSS M   F+HVLLL   G +AYHG ++A   YF SL Y  P NYNP+DF L+++SA PGA   + + +    +    A  M +   L P+  H  F  V    G  + + L  K+N+WRA  Q  RD  T  L+ LV  L+  G +FG+L+  QA S+WRNL+G++F++VVA L   S+ V ++FP++W+I +REY++G+NA+GPY + R I D P      LL+ + YWM+G+ +    F+ +   F      S S G   SSFSA+P +GL I P    PMI+FSG+LYERSSVP +L W+Q +S+VNY F+AL+I + + L   P+  LV+ F++++    G  IG L+ +  G++  +++ L LR+R+AT
Sbjct:   84 MGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGE-FALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGA---EVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGT--LYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYAT 625          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 397.897 bits (1021), Expect = 7.145e-128
Identity = 221/541 (40.85%), Postives = 331/541 (61.18%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSG--RIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISA--------TPGADPAQEKAR--------------MNQLVAAYNASDMVRKTPLAPDETHKQFQMVFG-HASSWTL-FKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQ-ARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVEL-NPDTMGWDIGML 513
            MGPSG GKT+LL+C++LR R FEG++  + +  TG +F  +  VHQKEL F  +T REHL+FHA+  +S++ ++E+  ARVE V++EV L K  D  +GG D +Y+  G+SGGERKRL+IA ELL  P+++ LDEP+SGLDSVM E +   LK +      R+V+A++H PSS +    +HV LLT  G LAY G +D  + +   L Y+CP  +NP+DF L+L SA         PG    QE A                 +LVAA  ++      PL  +  HK+   V G  AS+W + F+ NLWR+++  +R++V   +  L++  +G +FG+LY+QQ    N RN  G LFS++V  L  SS+AV M FP D+AI++REY++G N+   Y + R +   P      ++  L Y+M G+      F  + L F   N+A+ S+G   SSFSANP +GL+ILP F+ PMI+FSG+LYER+SVP  L W+Q +S++NYSF+ +++ Q+  +  P    ++ F+++ + D  G+ I ++
Sbjct:  111 MGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHIDGPARSFLIDFLQIKDSDFPGFLIALV 650          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 325.479 bits (833), Expect = 2.248e-100
Identity = 184/552 (33.33%), Postives = 307/552 (55.62%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKT--------PLAPDETHKQFQMVFGH--ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARS--NWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMG-YGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIH----------ILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLS 529
            MG SGAGK++LL+CISLRN+KFEG V  D +     FF  +  V+Q +L F  +T REHL FHA+ RM K         RVE +L +V L+ C+D ++GG   +   +G+SGGERKR+++A ELL  P ++FLDEP+SGLDS M+E++   L+ L  +G+IVV  +H PSS+  + FTH+ LL   GR+AY G    A+ YF++L + CP N+NP+DF+++ ++  P +D  +  AR+  +  AY  SD+ ++         P    +  ++  +      A++ T F  +  R  +Q +R+ V      + S L+G L G++Y+ Q  +    +N +G+ F V +    +++  V+   P D+A+ +REY +G+N +  Y +AR + + P     P +  +++Y M G+    G ++ F L  I     + SMG  +S+   N    +      + PM +FSG+L +  ++  WL  LQ LSI+ Y++ A++I +            I P      V+ +V   PD + +++GML++    F+++ ++ L 
Sbjct:   86 MGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAERVESILLDVGLQGCSDALIGGASSLI--RGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLLA-KGRMAYLGELPKAVDYFAALGHACPPNFNPADFFIEELAVVP-SDYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVDPAVLSKPRRRTGIAITEYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFDQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPINCGFNVICPFRTGNAVLTYVGAAPDELSFNMGMLFVFMLCFRLVAFMALK 633          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 315.464 bits (807), Expect = 1.089e-95
Identity = 188/556 (33.81%), Postives = 304/556 (54.68%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYN-----ASDMVRKTPLAPDE----THKQFQMVFGHASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGL-FGILYWQQ--ARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMG-YGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALL------------VMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLR 531
            MG SGAGK+T L+C+SLRN++F G V+ + +    +++  +  V+Q++L    MT REHL FHA+ RM+ +  +E+   RVE+VL EV +  C +TI+GG    Y  +G+SGGE+KRL+   ELL  P ++F DEP+SGLDS M+  +  T+++L   G+I++  +H PSS+    FTH+LLL   GR+ Y+G       YFSSL   CP  +NP+DF++  IS  P    A   AR+  L  AY      A +M  K  + P E     HK   M   HAS+WT F   + R  IQ +    T V    +++LV G+  G +Y+ Q   + + +N++GL F +++     S   V+  FP +  + +RE  SG+N +  Y +AR + + P     P +   ++Y M  +    G+F  +  T I     +TS+G  +SS +++  +   + P F+ PM +F+G+L + +++P WL WL   SI+ Y +  L+I Q     + L+ +            VM +V  +P  +G  +G+L  +   F++L +  L+ +
Sbjct:  165 MGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGGPGTGY--RGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLLA-KGRIVYNGPMATLQSYFSSLGVICPHFHNPADFFINQISIVPTEQEA-SMARLQSLWDAYENSNLAAGNMAWKAEM-PAEILNLKHKAVSMKHFHASTWTQFYYTMKRN-IQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQ--YTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAFFFLTRK 712          
BLAST of EWM24668.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 300.442 bits (768), Expect = 2.951e-90
Identity = 183/552 (33.15%), Postives = 300/552 (54.35%), Query Frame = 0
Query:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSS-LSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTP--LAPDETHKQFQMVFGH--------ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQA--RSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGY-GPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQI---HILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFA 535
            MG SGAGK++LL+CISLRN +FEG V+ D       FF+ S  VHQ +L F  +T REHL FHA+ R+ +   I     RVEEV+  V L K AD+++GG  P    +G+SGGERKRLS+A ELL  P++IF DEP+SGLD+ M+ S+   LK L  SGR+V   +H PSSE+ + FTH++LL   G+ AY G +   + YF+S L  +CP+ YNP+D+ ++ ++     +  + +  +  ++  Y +S++ R     +A  E      M            A+SWT F  +  R      R+ V   +    +  +G + G++Y QQ    S  +N LG +F +++     S   V    P D A+ +REY + +N    Y +   + + P     P +  ++ YW+ G   +  +F IF +T +    AS S+G  +S+ + +  + + + P  + PM +++G+L+    VP +   L  +S++ Y+F A+++ +       P+ L   V +++ +    +G+ I ML ++ FGF+ L Y+ L +R + A
Sbjct:  138 MGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGG--PQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLA-RGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLE--KPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQ-LRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRA 683          
The following BLAST results are available for this feature:
BLAST of EWM24668.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106190|gb|EWM24668.1|0.000e+0100.00abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585108726|gb|EWM26638.1|0.000e+061.64abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585110259|gb|EWM27919.1|0.000e+056.33abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553189117|ref|XP_005854935.1|0.000e+056.33atp-binding cassette [Nannochloropsis gaditana CCM... [more]
gi|585109266|gb|EWM27089.1|3.230e-16246.91abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585109183|gb|EWM27013.1|8.531e-15845.26white [Nannochloropsis gaditana][more]
gi|585106124|gb|EWM24607.1|7.145e-12840.85abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102296|gb|EWM21944.1|2.248e-10033.33white [Nannochloropsis gaditana][more]
gi|585102173|gb|EWM21831.1|1.089e-9533.81abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585110513|gb|EWM28168.1|2.951e-9033.15abc subfamily abcg [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6019rna6019Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications