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Properties
| Property Name | Value |
|---|
| Product | rnp-1 like rna-binding protein |
| Orig transcript id | gnl|cribi|Naga_100123g15.6331.mrna |
| Orig protein id | gnl|cribi|Naga_100123g15.6331 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:333968..335887 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6004 ID=rna6004|Name=rna6004|organism=Nannochloropsis gaditana|type=mRNA|length=765bp
ATGAGGGACGAGACAAATCAGTACGGCGATGGCAGCGGCGTTGTTGGACC
TCAAAGGCGAGACCCAGTGCTGGTGGCCTCCGTCCGAGACCCCCAGCCAA
ATGCTCGGATCCACGCCATGCCATGCTCCATAAGCTACGACGGCCCAGCC
GCAGTCAATACCTACTTTATGCCTCGCGATACCACAGCGTGCGAAACAGG
CATGAGCGCTGCGAATAATAAGGCAATTTCGAGGAACGGAGAAGAGGGTG
CCGAAGGGTTTAGCAAACGTGCCAAGCTAGGTAAAGAAGAGCTGCTTTGT
GTGGAAGGTCGTCTGTACGAAGCCCAGTTCCGAGGTCGCTTTTTGAGAGG
CATTGGGGCGGCCTGTCCCCAGGGCATGCGAGGTTTCGTAGTGCGCGAAC
GCGTCCTTCCCCTTGAGTTGAAGGAGGTCGCTCCATCTGCAGCTTTGAAT
AGGTATGAAATGGACAGTGGAGGACTGGCGAAGCTTAGCCCATGCGATCC
ACAACGACTCGAATTGATCTTAATTTTTCCCCTCTCGCTGAGGTCCTGGA
AATGGGAAGGGATGGTACGAACATATGGAGCCTTATCAACGAGTGTACCG
TGTACATATCCCGTGCGTCCCATGGGAGTCACCAATAAGGAGGCTCTCGG
TTCCGGTCGAAGGCATGATATGTGTCGTGATTCTGACGGCCTCCGGTGGC
GAGAACGATGTTTCTCACTGCCCTTCATTTCCGACGCTTCAACTGTCGTG
TTACACATTCGTTGA back to topprotein sequence of rna6004 >rna6004-protein ID=rna6004-protein|Name=rna6004|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MNEDTSGTGEAYDPFAQPYLPALPPAHDAPDSQAPPEAPVSLDPTRGDSS
SPPRASGVSGATMDHKGKRLYVGQLSFDTTDREIRDIFSKIGSLRYCRIM
TDKGTNKSRGFAFVGFSTRAAAQKAMQMWDNRELNGRRLKIRLAEPRAGE
GEGGADEGGVGREDRAEGGVRGANGDSHHKQLPCSLRMDQINDFATAPAL
HFNVMRAGWAPSNVNR back to topmRNA from alignment at CM002467.1:333968..335887+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6004 ID=rna6004|Name=rna6004|organism=Nannochloropsis gaditana|type=mRNA|length=1920bp|location=Sequence derived from alignment at CM002467.1:333968..335887+ (Nannochloropsis gaditana)
ATGAATGAGGACACGTCTGGTACAGGGGAGGCCTATGACCCTTTTGCCCA
AccctacctccccgcccttccccccgcccacgaCGCGCCGGACTCCCAAG
CACCCCCCGAGGCCCCCGTCTCCCTTGATCCCACCCGAGGAGATTCGTCG
AGCCCTCCACGAGCCAGTGGGGTGAGTGGCGCCACCATGGACCACAAAGG
GAAGCGTCTCTACGTGGGACAGTTGTCTTTTGACACGACGGACCGCGAGA
TTCGAGATATTTTTTCCAAGATCGGCTCTCTCCGCTACTGCAGGATCATG
ACAGACAAAGGAACGAACAAATCACGAGGCTTTGCCTTTGTGGGATTTTC
CACGCGCGCAGCGGCGCAGAAGGCCATGCAGATGTGGGACAATAGAGAGC
TGAATGGACGGCGGCTGAAAATCCGGCTTGCCGAGCCCCGCgccggagaa
ggcgagggcggcgcCGATGAAGGGGGGGTTGGACGGGAGGAtcgagcgga
gggaggtgtgaGAGGAGCTAATGGTGGtaggaatgaggaggaatggaagc
aGGAGAGGTGGCGAGAAGGGCAGgtagcgagggagagggggagagagaag
gaaaggggaagggagaggggaagggagggcggggagttTTGTGATCGCGA
CTacagggagcgagagcggctgcgcgagagagaaagggatcGGGAGGCAG
ATCTGCGGAGGGATGTGCGTCCCAGGTACacgcgcgaggaggaagagtat
CGCCGGGTGGTGGACCGACCGACGAGGCCCGAGGTGGGGGCCTCGAAAga
gcggagggagtggcGGGAGGGCTATCCTTCCCGTGCTGATGCTGCGTACG
ATGACCGGCTGTACTATGCTGCCGTGCATCCAGGTCCTGGCCCGTTCCAC
cgcggggagtgggaggagcgcgggcgggggggaaggcgagagggggatgg
aTACGAGTACCCAGAGCGGCGGTCGAGGGAGCGCAGGCCTTACGAAGAGG
AGTACTACCACCGTCTGACGAGCGCCCGCACGGGccgctctcgctccccc
GGTGTCCGCCGGGAAGCGTATCCTCTCCCGGAGCCCGCTTACGTCCGAGG
CTACCGGaggtcctcctctccccgagGACCCGCGCCTGCCTAcaggccct
ttcctccgggtatggaGGCGGAGTCCACGGCTTTTTATTCGATGCgggaa
gggcgaagggggcggtcgaggtcgaggtcgagatccaggtcgagggcggg
gcccgcGTACGGGGGAgtacgggggggggggatggaggaggaggggcgcc
gAGAGCAGCGTGTGCCGTTGTCGGCGTACGAGGCTTATGAGGAGACGCGT
AGGCGgggcgacgggggagggagggagcgcgaggtggtgggggtccGCGG
TGGGAACGGGGTCGGACTGGGGCGCGAGGACTTGGGGTACGTGCGGggcg
ccttttcctcctccatggccccgCGGCCGTCCgggccgctgccgccgctg
cctgCTCGCGGCGAGGGCAAGGAGTGGGGtagggcggaagggagggggcc
tgGGAGTctgcgggtggaggagggggggtaCCGGGATGCGCGCCTCCGTC
GATGAGGCGGGGGCCTTGAAGGGGAGGTTTGGCTGCTGTGGCCCGAGGAC
AATAGAGAGAGTTGCTGGGATggcaagagaggagaagtTGATTCTTagct
ggagaaggggagacaggggaagcgggaggggggagggggtttaaaggagg
agggcaggacgCATGGGAAGCACGGCCGGGAGGGCCCAAAAGTAGACTCG
CATCATAAGCAATTGCCTTGCTCGTTGAGGATGGACCAGATAAATGATTT
CGCGACAGCCCCTGCCTTGCACTTCAATGTGATGCGGGCCGGCTGGGCGC
CTTCGAACGTCAACAGATAG back to topCoding sequence (CDS) from alignment at CM002467.1:333968..335887+ >rna6004 ID=rna6004|Name=rna6004|organism=Nannochloropsis gaditana|type=CDS|length=1302bp|location=Sequence derived from alignment at CM002467.1:333968..335887+ (Nannochloropsis gaditana)
ATGAATGAGGACACGTCTGGTACAGGGGAGGCCTATGACCCTTTTGCCCA
AccctacctccccgcccttccccccgcccacgaCGCGCCGGACTCCCAAG
CACCCCCCGAGGCCCCCGTCTCCCTTGATCCCACCCGAGGAGATTCGTCG
AGCCCTCCACGAGCCAGTGGGGTGAGTGGCGCCACCATGGACCACAAAGG
GAAGCGTCTCTACGTGGGACAGTTGTCTTTTGACACGACGGACCGCGAGA
TTCGAGATATTTTTTCCAAGATCGGCTCTCTCCGCTACTGCAGGATCATG
ACAGACAAAGGAACGAACAAATCACGAGGCTTTGCCTTTGTGGGATTTTC
CACGCGCGCAGCGGCGCAGAAGGCCATGCAGATGTGGGACAATAGAGAGC
TGAATGGACGGCGGCTGAAAATCCGGCTTGCCGAGCCCCGCgccggagaa
ggcgagggcggcgcCGATGAAGGGGGGGTTGGACGGGAGGAtcgagcgga
gggaggtgtgaGAGGAGCTAATGGTGACTCGCATCATAAGCAATTGCCTT
GCTCGTTGAGGATGGACCAGATAAATGATTTCGCGACAGCCCCTGCCTTG
CACTTCAATGTGATGCGGGCCGGCTGGGCGCCTTCGAACGTCAACAGATA
GATGAATGAGGACACGTCTGGTACAGGGGAGGCCTATGACCCTTTTGCCC
AAccctacctccccgcccttccccccgcccacgaCGCGCCGGACTCCCAA
GCACCCCCCGAGGCCCCCGTCTCCCTTGATCCCACCCGAGGAGATTCGTC
GAGCCCTCCACGAGCCAGTGGGGTGAGTGGCGCCACCATGGACCACAAAG
GGAAGCGTCTCTACGTGGGACAGTTGTCTTTTGACACGACGGACCGCGAG
ATTCGAGATATTTTTTCCAAGATCGGCTCTCTCCGCTACTGCAGGATCAT
GACAGACAAAGGAACGAACAAATCACGAGGCTTTGCCTTTGTGGGATTTT
CCACGCGCGCAGCGGCGCAGAAGGCCATGCAGATGTGGGACAATAGAGAG
CTGAATGGACGGCGGCTGAAAATCCGGCTTGCCGAGCCCCGCgccggaga
aggcgagggcggcgcCGATGAAGGGGGGGTTGGACGGGAGGAtcgagcgg
agggaggtgtgaGAGGAGCTAATGGTGACTCGCATCATAAGCAATTGCCT
TGCTCGTTGAGGATGGACCAGATAAATGATTTCGCGACAGCCCCTGCCTT
GCACTTCAATGTGATGCGGGCCGGCTGGGCGCCTTCGAACGTCAACAGAT
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